RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 NSD2O96028 1365 aa29.52■■■□□ 2.32
ME3-201ENST00000323418 PKD1L3Q7Z443 1732 aa29.51■■■□□ 2.32
ME3-201ENST00000323418 SLC15A2Q16348 729 aa29.51■■■□□ 2.31
ME3-201ENST00000323418 HSP90AB2PQ58FF8 381 aa29.5■■■□□ 2.31
ME3-201ENST00000323418 DDX54Q8TDD1 881 aaKnown RBP29.5■■■□□ 2.31
ME3-201ENST00000323418 SMG6Q86US8 1419 aaKnown RBP29.5■■■□□ 2.31
ME3-201ENST00000323418 NCAPD2Q15021 1401 aa29.49■■■□□ 2.31
ME3-201ENST00000323418 STK32BQ9NY57 414 aa29.48■■■□□ 2.31
ME3-201ENST00000323418 USHBP1Q8N6Y0 703 aa29.47■■■□□ 2.31
ME3-201ENST00000323418 ZCRB1Q8TBF4 217 aaKnown RBP29.47■■■□□ 2.31
ME3-201ENST00000323418 TOGARAM1Q9Y4F4 1720 aa29.47■■■□□ 2.31
ME3-201ENST00000323418 LRRC4BQ9NT99 713 aa29.46■■■□□ 2.31
ME3-201ENST00000323418 EMILIN1Q9Y6C2 1016 aa29.46■■■□□ 2.31
ME3-201ENST00000323418 COL24A1Q17RW2 1714 aa29.45■■■□□ 2.31
ME3-201ENST00000323418 CGNL1Q0VF96 1302 aa29.44■■■□□ 2.3
ME3-201ENST00000323418 ITGB4P16144 1822 aa29.43■■■□□ 2.3
ME3-201ENST00000323418 PTGER2P43116 358 aa29.43■■■□□ 2.3
ME3-201ENST00000323418 HSPA5P11021 654 aaKnown RBP29.42■■■□□ 2.3
ME3-201ENST00000323418 ZNF827Q17R98 1081 aa29.42■■■□□ 2.3
ME3-201ENST00000323418 ZBTB7AO95365 584 aa29.41■■■□□ 2.3
ME3-201ENST00000323418 PRIM1P49642 420 aaKnown RBP29.4■■■□□ 2.3
ME3-201ENST00000323418 EIF4G2P78344 907 aaKnown RBP eCLIP29.39■■■□□ 2.3
ME3-201ENST00000323418 CCER1Q8TC90 406 aaPredicted RBP29.38■■■□□ 2.29
ME3-201ENST00000323418 SGIP1Q9BQI5 828 aa29.38■■■□□ 2.29
ME3-201ENST00000323418 PPP1R1BQ9UD71 204 aaPredicted RBP29.38■■■□□ 2.29
ME3-201ENST00000323418 TAF1LQ8IZX4 1826 aa29.37■■■□□ 2.29
ME3-201ENST00000323418 RAPGEF4Q8WZA2 1011 aa29.37■■■□□ 2.29
ME3-201ENST00000323418 AKT1S1Q96B36 256 aa29.37■■■□□ 2.29
ME3-201ENST00000323418 TATP17735 454 aaPredicted RBP29.36■■■□□ 2.29
ME3-201ENST00000323418 SLC27A3Q5K4L6 730 aa29.36■■■□□ 2.29
ME3-201ENST00000323418 WASHC2AQ641Q2 1341 aa29.36■■■□□ 2.29
ME3-201ENST00000323418 C5P01031 1676 aa29.34■■■□□ 2.29
ME3-201ENST00000323418 SYTL4Q96C24 671 aaPredicted RBP29.34■■■□□ 2.29
ME3-201ENST00000323418 MTFR1LQ9H019 292 aa29.34■■■□□ 2.29
ME3-201ENST00000323418 ATF5Q9Y2D1 282 aaPredicted RBP29.34■■■□□ 2.29
ME3-201ENST00000323418 POLKQ9UBT6 870 aa29.33■■■□□ 2.29
ME3-201ENST00000323418 PCDH11XQ9BZA7 1347 aa29.33■■■□□ 2.29
ME3-201ENST00000323418 PCDH11YQ9BZA8 1340 aa29.33■■■□□ 2.29
ME3-201ENST00000323418 CYP27B1O15528 508 aa29.31■■■□□ 2.28
ME3-201ENST00000323418 POLR3GLQ9BT43 218 aa29.31■■■□□ 2.28
ME3-201ENST00000323418 KCNQ4P56696 695 aa29.3■■■□□ 2.28
ME3-201ENST00000323418 PNPLA7Q6ZV29 1317 aa29.28■■■□□ 2.28
ME3-201ENST00000323418 PPM1GO15355 546 aaPredicted RBP29.28■■■□□ 2.28
ME3-201ENST00000323418 EYA1Q99502 592 aa29.27■■■□□ 2.28
ME3-201ENST00000323418 PANK3Q9H999 370 aa29.27■■■□□ 2.28
ME3-201ENST00000323418 EIF4A2Q14240 407 aaKnown RBP29.22■■■□□ 2.27
ME3-201ENST00000323418 CCNL1Q9UK58 526 aaPredicted RBP29.22■■■□□ 2.27
ME3-201ENST00000323418 NKX1-1Q15270 411 aaPredicted RBP29.21■■■□□ 2.27
ME3-201ENST00000323418 FHDC1Q9C0D6 1143 aaPredicted RBP29.21■■■□□ 2.27
ME3-201ENST00000323418 SLC16A10Q8TF71 515 aa29.2■■■□□ 2.26
ME3-201ENST00000323418 SYT17Q9BSW7 474 aa29.2■■■□□ 2.26
ME3-201ENST00000323418 MAP3K5Q99683 1374 aa29.2■■■□□ 2.26
ME3-201ENST00000323418 PLEKHG2Q9H7P9 1386 aa29.2■■■□□ 2.26
ME3-201ENST00000323418 C4BP0C0L5 1744 aa29.2■■■□□ 2.26
ME3-201ENST00000323418 PALLDQ8WX93 1383 aa29.19■■■□□ 2.26
ME3-201ENST00000323418 TNNT2P45379 298 aaPredicted RBP29.19■■■□□ 2.26
ME3-201ENST00000323418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.19■■■□□ 2.26
ME3-201ENST00000323418 UBR3Q6ZT12 1888 aa29.19■■■□□ 2.26
ME3-201ENST00000323418 IGSF1Q8N6C5 1336 aa29.18■■■□□ 2.26
ME3-201ENST00000323418 ARXQ96QS3 562 aa29.16■■■□□ 2.26
ME3-201ENST00000323418 TFCP2L1Q9NZI6 479 aa29.16■■■□□ 2.26
ME3-201ENST00000323418 SPG7Q9UQ90 795 aa29.16■■■□□ 2.26
ME3-201ENST00000323418 MPRIPQ6WCQ1 1025 aa29.15■■■□□ 2.26
ME3-201ENST00000323418 PIGBQ92521 554 aa29.13■■■□□ 2.25
ME3-201ENST00000323418 CHD4Q14839 1912 aa29.13■■■□□ 2.25
ME3-201ENST00000323418 PHKG2P15735 406 aa29.12■■■□□ 2.25
ME3-201ENST00000323418 KIF7Q2M1P5 1343 aa29.12■■■□□ 2.25
ME3-201ENST00000323418 COL23A1Q86Y22 540 aaPredicted RBP29.1■■■□□ 2.25
ME3-201ENST00000323418 ZNF831Q5JPB2 1677 aa29.09■■■□□ 2.25
ME3-201ENST00000323418 YY1P25490 414 aa29.09■■■□□ 2.25
ME3-201ENST00000323418 AMER1Q5JTC6 1135 aaPredicted RBP29.08■■■□□ 2.25
ME3-201ENST00000323418 IFNL2Q8IZJ0 200 aa29.08■■■□□ 2.25
ME3-201ENST00000323418 MORC1Q86VD1 984 aa29.07■■■□□ 2.24
ME3-201ENST00000323418 SMARCC1Q92922 1105 aaPredicted RBP29.07■■■□□ 2.24
ME3-201ENST00000323418 UTRNP46939 3433 aa29.07■■■□□ 2.24
ME3-201ENST00000323418 DCAF8L1A6NGE4 600 aa29.06■■■□□ 2.24
ME3-201ENST00000323418 COL5A3P25940 1745 aaPredicted RBP29.05■■■□□ 2.24
ME3-201ENST00000323418 VIRMAQ69YN4 1812 aaKnown RBP29.04■■■□□ 2.24
ME3-201ENST00000323418 AMIGO3Q86WK7 504 aa29.04■■■□□ 2.24
ME3-201ENST00000323418 KNSTRNQ9Y448 316 aa29.04■■■□□ 2.24
ME3-201ENST00000323418 KDM6AO15550 1401 aaPredicted RBP29.03■■■□□ 2.24
ME3-201ENST00000323418 POLD1P28340 1107 aa29.03■■■□□ 2.24
ME3-201ENST00000323418 KDRP35968 1356 aa29.02■■■□□ 2.24
ME3-201ENST00000323418 TMOD3Q9NYL9 352 aa29.02■■■□□ 2.24
ME3-201ENST00000323418 SCN11AQ9UI33 1791 aa29.02■■■□□ 2.24
ME3-201ENST00000323418 AEBP1Q8IUX7 1158 aa29.01■■■□□ 2.23
ME3-201ENST00000323418 ASAP1Q9ULH1 1129 aa29.01■■■□□ 2.23
ME3-201ENST00000323418 PER1O15534 1290 aaPredicted RBP29■■■□□ 2.23
ME3-201ENST00000323418 LOC102724428A0A0B4J2F2 783 aa28.99■■■□□ 2.23
ME3-201ENST00000323418 SIK1P57059 783 aa28.99■■■□□ 2.23
ME3-201ENST00000323418 HMGB2P26583 209 aaKnown RBP28.98■■■□□ 2.23
ME3-201ENST00000323418 IL13P35225 146 aa28.98■■■□□ 2.23
ME3-201ENST00000323418 LINC00116Q8NCU8 138 aa28.98■■■□□ 2.23
ME3-201ENST00000323418 ATG3Q9NT62 314 aa28.98■■■□□ 2.23
ME3-201ENST00000323418 ITPK1Q13572 414 aa28.97■■■□□ 2.23
ME3-201ENST00000323418 CICQ96RK0 1608 aaPredicted RBP28.96■■■□□ 2.23
ME3-201ENST00000323418 MSL1Q68DK7 614 aa28.96■■■□□ 2.23
ME3-201ENST00000323418 FLAD1Q8NFF5 587 aa28.96■■■□□ 2.23
ME3-201ENST00000323418 MSH5O43196 834 aa28.95■■■□□ 2.22
ME3-201ENST00000323418 PLEKHO1Q53GL0 409 aaPredicted RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms