RNA–Protein interactions for RNA: ENST00000323250.9

TYMS-202, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-202ENST00000323250 NHSQ6T4R5 1651 aa24.27■■□□□ 1.48
TYMS-202ENST00000323250 RAPGEF4Q8WZA2 1011 aa24.26■■□□□ 1.47
TYMS-202ENST00000323250 RGPD3A6NKT7 1758 aaPredicted RBP24.26■■□□□ 1.47
TYMS-202ENST00000323250 RGPD4Q7Z3J3 1758 aa24.26■■□□□ 1.47
TYMS-202ENST00000323250 ANKRD26Q9UPS8 1709 aa24.25■■□□□ 1.47
TYMS-202ENST00000323250 EYA1Q99502 592 aa24.25■■□□□ 1.47
TYMS-202ENST00000323250 SHANK3Q9BYB0 1731 aa24.24■■□□□ 1.47
TYMS-202ENST00000323250 TATP17735 454 aaPredicted RBP24.24■■□□□ 1.47
TYMS-202ENST00000323250 MAP2P11137 1827 aaKnown RBP24.24■■□□□ 1.47
TYMS-202ENST00000323250 PRIM1P49642 420 aaKnown RBP24.23■■□□□ 1.47
TYMS-202ENST00000323250 AMER1Q5JTC6 1135 aaPredicted RBP24.23■■□□□ 1.47
TYMS-202ENST00000323250 KNSTRNQ9Y448 316 aa24.23■■□□□ 1.47
TYMS-202ENST00000323250 NSD2O96028 1365 aa24.23■■□□□ 1.47
TYMS-202ENST00000323250 NCAPD2Q15021 1401 aa24.23■■□□□ 1.47
TYMS-202ENST00000323250 EIF4A2Q14240 407 aaKnown RBP24.22■■□□□ 1.47
TYMS-202ENST00000323250 MORC1Q86VD1 984 aa24.21■■□□□ 1.47
TYMS-202ENST00000323250 LRP5O75197 1615 aa24.21■■□□□ 1.47
TYMS-202ENST00000323250 PER1O15534 1290 aaPredicted RBP24.2■■□□□ 1.46
TYMS-202ENST00000323250 PDGFDQ9GZP0 370 aaPredicted RBP24.2■■□□□ 1.46
TYMS-202ENST00000323250 CYP27B1O15528 508 aa24.19■■□□□ 1.46
TYMS-202ENST00000323250 SYTL4Q96C24 671 aaPredicted RBP24.19■■□□□ 1.46
TYMS-202ENST00000323250 BTAF1O14981 1849 aa24.19■■□□□ 1.46
TYMS-202ENST00000323250 LRRC4BQ9NT99 713 aa24.18■■□□□ 1.46
TYMS-202ENST00000323250 KAT6BQ8WYB5 2073 aa24.17■■□□□ 1.46
TYMS-202ENST00000323250 PCDH11XQ9BZA7 1347 aa24.15■■□□□ 1.46
TYMS-202ENST00000323250 PCDH11YQ9BZA8 1340 aa24.15■■□□□ 1.46
TYMS-202ENST00000323250 KCNQ4P56696 695 aa24.14■■□□□ 1.45
TYMS-202ENST00000323250 SLC15A2Q16348 729 aa24.14■■□□□ 1.45
TYMS-202ENST00000323250 DOT1LQ8TEK3 1739 aa24.13■■□□□ 1.45
TYMS-202ENST00000323250 STK32BQ9NY57 414 aa24.12■■□□□ 1.45
TYMS-202ENST00000323250 IGSF1Q8N6C5 1336 aa24.11■■□□□ 1.45
TYMS-202ENST00000323250 ZNF827Q17R98 1081 aa24.11■■□□□ 1.45
TYMS-202ENST00000323250 CC2D1BQ5T0F9 858 aaKnown RBP24.11■■□□□ 1.45
TYMS-202ENST00000323250 SPG7Q9UQ90 795 aa24.09■■□□□ 1.45
TYMS-202ENST00000323250 PKD1L3Q7Z443 1732 aa24.09■■□□□ 1.45
TYMS-202ENST00000323250 PAPPAQ13219 1627 aa24.09■■□□□ 1.45
TYMS-202ENST00000323250 NKX1-1Q15270 411 aaPredicted RBP24.08■■□□□ 1.45
TYMS-202ENST00000323250 AEBP1Q8IUX7 1158 aa24.08■■□□□ 1.45
TYMS-202ENST00000323250 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.08■■□□□ 1.45
TYMS-202ENST00000323250 CASZ1Q86V15 1759 aa24.06■■□□□ 1.44
TYMS-202ENST00000323250 ZBTB7AO95365 584 aa24.06■■□□□ 1.44
TYMS-202ENST00000323250 IL13P35225 146 aa24.06■■□□□ 1.44
TYMS-202ENST00000323250 CNGB1Q14028 1251 aaPredicted RBP24.06■■□□□ 1.44
TYMS-202ENST00000323250 SLC27A3Q5K4L6 730 aa24.06■■□□□ 1.44
TYMS-202ENST00000323250 MPRIPQ6WCQ1 1025 aa24.06■■□□□ 1.44
TYMS-202ENST00000323250 AKT1S1Q96B36 256 aa24.06■■□□□ 1.44
TYMS-202ENST00000323250 SPON1Q9HCB6 807 aa24.06■■□□□ 1.44
TYMS-202ENST00000323250 PHKG2P15735 406 aa24.05■■□□□ 1.44
TYMS-202ENST00000323250 MTHFSP49914 203 aa24.05■■□□□ 1.44
TYMS-202ENST00000323250 TOGARAM1Q9Y4F4 1720 aa24.04■■□□□ 1.44
TYMS-202ENST00000323250 PIGBQ92521 554 aa24.03■■□□□ 1.44
TYMS-202ENST00000323250 IFNL2Q8IZJ0 200 aa24.02■■□□□ 1.44
TYMS-202ENST00000323250 CCNL1Q9UK58 526 aaPredicted RBP24.02■■□□□ 1.44
TYMS-202ENST00000323250 ATF5Q9Y2D1 282 aaPredicted RBP24.02■■□□□ 1.44
TYMS-202ENST00000323250 PTGER2P43116 358 aa24.01■■□□□ 1.43
TYMS-202ENST00000323250 SULT6B1Q6IMI4 303 aa24.01■■□□□ 1.43
TYMS-202ENST00000323250 NPC1L1Q9UHC9 1359 aa24.01■■□□□ 1.43
TYMS-202ENST00000323250 LY75O60449 1722 aa24■■□□□ 1.43
TYMS-202ENST00000323250 PALLDQ8WX93 1383 aa23.98■■□□□ 1.43
TYMS-202ENST00000323250 KDRP35968 1356 aa23.97■■□□□ 1.43
TYMS-202ENST00000323250 PLEKHO1Q53GL0 409 aaPredicted RBP23.97■■□□□ 1.43
TYMS-202ENST00000323250 PNPLA7Q6ZV29 1317 aa23.97■■□□□ 1.43
TYMS-202ENST00000323250 PLEKHG2Q9H7P9 1386 aa23.97■■□□□ 1.43
TYMS-202ENST00000323250 SGIP1Q9BQI5 828 aa23.96■■□□□ 1.43
TYMS-202ENST00000323250 ZNF530Q6P9A1 599 aaPredicted RBP23.95■■□□□ 1.42
TYMS-202ENST00000323250 MTFR1LQ9H019 292 aa23.95■■□□□ 1.42
TYMS-202ENST00000323250 ASAP1Q9ULH1 1129 aa23.95■■□□□ 1.42
TYMS-202ENST00000323250 ITGB4P16144 1822 aa23.95■■□□□ 1.42
TYMS-202ENST00000323250 TFCP2L1Q9NZI6 479 aa23.94■■□□□ 1.42
TYMS-202ENST00000323250 PPP1R1BQ9UD71 204 aaPredicted RBP23.94■■□□□ 1.42
TYMS-202ENST00000323250 AMOTQ4VCS5 1084 aa23.93■■□□□ 1.42
TYMS-202ENST00000323250 TMOD3Q9NYL9 352 aa23.93■■□□□ 1.42
TYMS-202ENST00000323250 HMOX1P09601 288 aa23.92■■□□□ 1.42
TYMS-202ENST00000323250 SMARCC1Q92922 1105 aaPredicted RBP23.92■■□□□ 1.42
TYMS-202ENST00000323250 KDM6AO15550 1401 aaPredicted RBP23.92■■□□□ 1.42
TYMS-202ENST00000323250 DIAPH1O60610 1272 aaKnown RBP23.91■■□□□ 1.42
TYMS-202ENST00000323250 ATG3Q9NT62 314 aa23.91■■□□□ 1.42
TYMS-202ENST00000323250 COL3A1P02461 1466 aaPredicted RBP23.9■■□□□ 1.42
TYMS-202ENST00000323250 DCAF5Q96JK2 942 aa23.9■■□□□ 1.42
TYMS-202ENST00000323250 AMIGO3Q86WK7 504 aa23.89■■□□□ 1.41
TYMS-202ENST00000323250 LOC102724428A0A0B4J2F2 783 aa23.88■■□□□ 1.41
TYMS-202ENST00000323250 ERVV-2B6SEH9 535 aa23.88■■□□□ 1.41
TYMS-202ENST00000323250 SIK1P57059 783 aa23.88■■□□□ 1.41
TYMS-202ENST00000323250 COL23A1Q86Y22 540 aaPredicted RBP23.88■■□□□ 1.41
TYMS-202ENST00000323250 TUBGCP6Q96RT7 1819 aa23.88■■□□□ 1.41
TYMS-202ENST00000323250 HSP90AB1P08238 724 aaKnown RBP23.87■■□□□ 1.41
TYMS-202ENST00000323250 ITPK1Q13572 414 aa23.87■■□□□ 1.41
TYMS-202ENST00000323250 SMIM5Q71RC9 77 aa23.87■■□□□ 1.41
TYMS-202ENST00000323250 LINC00116Q8NCU8 138 aa23.86■■□□□ 1.41
TYMS-202ENST00000323250 SLC4A9Q96Q91 983 aa23.86■■□□□ 1.41
TYMS-202ENST00000323250 C1orf141Q5JVX7 400 aa23.85■■□□□ 1.41
TYMS-202ENST00000323250 SLC16A10Q8TF71 515 aa23.85■■□□□ 1.41
TYMS-202ENST00000323250 QSER1Q2KHR3 1735 aa23.84■■□□□ 1.41
TYMS-202ENST00000323250 C5P01031 1676 aa23.84■■□□□ 1.41
TYMS-202ENST00000323250 FHDC1Q9C0D6 1143 aaPredicted RBP23.84■■□□□ 1.41
TYMS-202ENST00000323250 PPP2R1AP30153 589 aa23.83■■□□□ 1.41
TYMS-202ENST00000323250 CABP4P57796 275 aa23.83■■□□□ 1.41
TYMS-202ENST00000323250 MTHFSDQ2M296 383 aaKnown RBP23.83■■□□□ 1.41
TYMS-202ENST00000323250 U2SURPO15042 1029 aaKnown RBP23.82■■□□□ 1.4
TYMS-202ENST00000323250 ATP6V1AP38606 617 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms