RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 PKD1L3Q7Z443 1732 aa25.26■■□□□ 1.63
CIRBP-201ENST00000320936 IGSF1Q8N6C5 1336 aa25.24■■□□□ 1.63
CIRBP-201ENST00000320936 NHSQ6T4R5 1651 aa25.23■■□□□ 1.63
CIRBP-201ENST00000320936 APBA3O96018 575 aa25.23■■□□□ 1.63
CIRBP-201ENST00000320936 DOT1LQ8TEK3 1739 aa25.23■■□□□ 1.63
CIRBP-201ENST00000320936 BCL9O00512 1426 aa25.22■■□□□ 1.63
CIRBP-201ENST00000320936 PCDH11XQ9BZA7 1347 aa25.21■■□□□ 1.63
CIRBP-201ENST00000320936 PCDH11YQ9BZA8 1340 aa25.21■■□□□ 1.63
CIRBP-201ENST00000320936 DIAPH1O60610 1272 aaKnown RBP25.21■■□□□ 1.63
CIRBP-201ENST00000320936 IL13P35225 146 aa25.21■■□□□ 1.63
CIRBP-201ENST00000320936 ACSBG1Q96GR2 724 aa25.21■■□□□ 1.63
CIRBP-201ENST00000320936 CFAP53Q96M91 514 aa25.21■■□□□ 1.63
CIRBP-201ENST00000320936 PPP2R1AP30153 589 aa25.2■■□□□ 1.62
CIRBP-201ENST00000320936 EN1Q05925 392 aaPredicted RBP25.2■■□□□ 1.62
CIRBP-201ENST00000320936 SPG7Q9UQ90 795 aa25.19■■□□□ 1.62
CIRBP-201ENST00000320936 COL3A1P02461 1466 aaPredicted RBP25.19■■□□□ 1.62
CIRBP-201ENST00000320936 ZNF316A6NFI3 1004 aaPredicted RBP25.18■■□□□ 1.62
CIRBP-201ENST00000320936 SULT6B1Q6IMI4 303 aa25.18■■□□□ 1.62
CIRBP-201ENST00000320936 AEBP1Q8IUX7 1158 aa25.18■■□□□ 1.62
CIRBP-201ENST00000320936 BCL11BQ9C0K0 894 aaPredicted RBP25.18■■□□□ 1.62
CIRBP-201ENST00000320936 PARD3Q8TEW0 1356 aa25.18■■□□□ 1.62
CIRBP-201ENST00000320936 U2SURPO15042 1029 aaKnown RBP25.16■■□□□ 1.62
CIRBP-201ENST00000320936 BTAF1O14981 1849 aa25.16■■□□□ 1.62
CIRBP-201ENST00000320936 PTF1AQ7RTS3 328 aa25.15■■□□□ 1.62
CIRBP-201ENST00000320936 SYTL4Q96C24 671 aaPredicted RBP25.15■■□□□ 1.62
CIRBP-201ENST00000320936 KCNQ2O43526 872 aa25.14■■□□□ 1.62
CIRBP-201ENST00000320936 HMOX1P09601 288 aa25.13■■□□□ 1.61
CIRBP-201ENST00000320936 RGPD3A6NKT7 1758 aaPredicted RBP25.13■■□□□ 1.61
CIRBP-201ENST00000320936 RGPD4Q7Z3J3 1758 aa25.13■■□□□ 1.61
CIRBP-201ENST00000320936 EZH2Q15910 746 aaKnown RBP25.12■■□□□ 1.61
CIRBP-201ENST00000320936 KDRP35968 1356 aa25.12■■□□□ 1.61
CIRBP-201ENST00000320936 RREB1Q92766 1687 aa25.12■■□□□ 1.61
CIRBP-201ENST00000320936 CYP27B1O15528 508 aa25.12■■□□□ 1.61
CIRBP-201ENST00000320936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.12■■□□□ 1.614e-13■□□□□ 8.8
CIRBP-201ENST00000320936 PLEKHG2Q9H7P9 1386 aa25.11■■□□□ 1.61
CIRBP-201ENST00000320936 RALBP1Q15311 655 aa25.11■■□□□ 1.61
CIRBP-201ENST00000320936 PLEKHO1Q53GL0 409 aaPredicted RBP25.11■■□□□ 1.61
CIRBP-201ENST00000320936 TOGARAM1Q9Y4F4 1720 aa25.1■■□□□ 1.61
CIRBP-201ENST00000320936 PRIM1P49642 420 aaKnown RBP25.09■■□□□ 1.61
CIRBP-201ENST00000320936 ZNF530Q6P9A1 599 aaPredicted RBP25.09■■□□□ 1.61
CIRBP-201ENST00000320936 CAMKK2Q96RR4 588 aa25.09■■□□□ 1.61
CIRBP-201ENST00000320936 NUDCQ9Y266 331 aa25.09■■□□□ 1.61
CIRBP-201ENST00000320936 NUP188Q5SRE5 1749 aa25.09■■□□□ 1.61
CIRBP-201ENST00000320936 AMOTQ4VCS5 1084 aa25.08■■□□□ 1.6
CIRBP-201ENST00000320936 IFNL2Q8IZJ0 200 aa25.08■■□□□ 1.6
CIRBP-201ENST00000320936 ITGB4P16144 1822 aa25.07■■□□□ 1.6
CIRBP-201ENST00000320936 PHKG2P15735 406 aa25.06■■□□□ 1.6
CIRBP-201ENST00000320936 C1orf141Q5JVX7 400 aa25.06■■□□□ 1.6
CIRBP-201ENST00000320936 PLSCR1O15162 318 aa25.04■■□□□ 1.6
CIRBP-201ENST00000320936 U2AF1L5P0DN76 240 aaPredicted RBP25.03■■□□□ 1.6
CIRBP-201ENST00000320936 U2AF1Q01081 240 aaKnown RBP eCLIP25.03■■□□□ 1.6
CIRBP-201ENST00000320936 MYBBP1AQ9BQG0 1328 aaKnown RBP25.03■■□□□ 1.6
CIRBP-201ENST00000320936 MPRIPQ6WCQ1 1025 aa25.02■■□□□ 1.6
CIRBP-201ENST00000320936 HSP90AB1P08238 724 aaKnown RBP25.01■■□□□ 1.59
CIRBP-201ENST00000320936 NKX1-1Q15270 411 aaPredicted RBP25.01■■□□□ 1.59
CIRBP-201ENST00000320936 VIRMAQ69YN4 1812 aaKnown RBP24.99■■□□□ 1.59
CIRBP-201ENST00000320936 TXNRD1Q16881 649 aa24.98■■□□□ 1.59
CIRBP-201ENST00000320936 TMOD3Q9NYL9 352 aa24.98■■□□□ 1.59
CIRBP-201ENST00000320936 PRKAR2BP31323 418 aa24.97■■□□□ 1.59
CIRBP-201ENST00000320936 PRKRIP1Q9H875 184 aaPredicted RBP24.97■■□□□ 1.59
CIRBP-201ENST00000320936 LY75O60449 1722 aa24.96■■□□□ 1.59
CIRBP-201ENST00000320936 NBPF14Q5TI25 921 aa24.96■■□□□ 1.59
CIRBP-201ENST00000320936 DCAF5Q96JK2 942 aa24.96■■□□□ 1.59
CIRBP-201ENST00000320936 SCN11AQ9UI33 1791 aa24.96■■□□□ 1.59
CIRBP-201ENST00000320936 PSDA5PKW4 1024 aaPredicted RBP24.95■■□□□ 1.58
CIRBP-201ENST00000320936 RSPH6AQ9H0K4 717 aa24.95■■□□□ 1.58
CIRBP-201ENST00000320936 KDM6AO15550 1401 aaPredicted RBP24.95■■□□□ 1.58
CIRBP-201ENST00000320936 MTHFSDQ2M296 383 aaKnown RBP24.94■■□□□ 1.58
CIRBP-201ENST00000320936 AKAP4Q5JQC9 854 aa24.94■■□□□ 1.58
CIRBP-201ENST00000320936 R3HDM1Q15032 1099 aaKnown RBP24.93■■□□□ 1.58
CIRBP-201ENST00000320936 PROM2Q8N271 834 aa24.93■■□□□ 1.58
CIRBP-201ENST00000320936 PIGBQ92521 554 aa24.92■■□□□ 1.58
CIRBP-201ENST00000320936 ERVV-2B6SEH9 535 aa24.91■■□□□ 1.58
CIRBP-201ENST00000320936 CABP4P57796 275 aa24.91■■□□□ 1.58
CIRBP-201ENST00000320936 GAS2L2Q8NHY3 880 aa24.91■■□□□ 1.58
CIRBP-201ENST00000320936 PALLDQ8WX93 1383 aa24.91■■□□□ 1.58
CIRBP-201ENST00000320936 FCHSD2O94868 740 aa24.9■■□□□ 1.58
CIRBP-201ENST00000320936 NEFMP07197 916 aa24.9■■□□□ 1.58
CIRBP-201ENST00000320936 SMARCC1Q92922 1105 aaPredicted RBP24.89■■□□□ 1.58
CIRBP-201ENST00000320936 CCNL1Q9UK58 526 aaPredicted RBP24.89■■□□□ 1.58
CIRBP-201ENST00000320936 MAP3K5Q99683 1374 aa24.89■■□□□ 1.57
CIRBP-201ENST00000320936 SLC27A3Q5K4L6 730 aa24.88■■□□□ 1.57
CIRBP-201ENST00000320936 PHACTR3Q96KR7 559 aa24.88■■□□□ 1.57
CIRBP-201ENST00000320936 PAPPAQ13219 1627 aa24.88■■□□□ 1.57
CIRBP-201ENST00000320936 ANP32CO43423 234 aa24.87■■□□□ 1.57
CIRBP-201ENST00000320936 KCNQ4P56696 695 aa24.87■■□□□ 1.57
CIRBP-201ENST00000320936 ANO8Q9HCE9 1232 aaPredicted RBP24.87■■□□□ 1.57
CIRBP-201ENST00000320936 STK32BQ9NY57 414 aa24.87■■□□□ 1.57
CIRBP-201ENST00000320936 C5P01031 1676 aa24.87■■□□□ 1.57
CIRBP-201ENST00000320936 WDR43Q15061 677 aaKnown RBP eCLIP24.86■■□□□ 1.57
CIRBP-201ENST00000320936 LRRC4BQ9NT99 713 aa24.86■■□□□ 1.57
CIRBP-201ENST00000320936 GNAT3A8MTJ3 354 aa24.85■■□□□ 1.57
CIRBP-201ENST00000320936 LGR6Q9HBX8 967 aa24.85■■□□□ 1.57
CIRBP-201ENST00000320936 ASAP1Q9ULH1 1129 aa24.85■■□□□ 1.57
CIRBP-201ENST00000320936 ADAMTS7Q9UKP4 1686 aa24.85■■□□□ 1.57
CIRBP-201ENST00000320936 MAPK8IP3Q9UPT6 1336 aa24.84■■□□□ 1.57
CIRBP-201ENST00000320936 RNMTO43148 476 aaKnown RBP24.84■■□□□ 1.57
CIRBP-201ENST00000320936 NFATC2IPQ8NCF5 419 aa24.84■■□□□ 1.57
CIRBP-201ENST00000320936 PNNQ9H307 717 aaKnown RBP24.84■■□□□ 1.57
CIRBP-201ENST00000320936 TAF1LQ8IZX4 1826 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms