RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 LRP6O75581 1613 aa18.19■□□□□ 0.5
VRK3-201ENST00000316763 KDRP35968 1356 aa18.19■□□□□ 0.5
VRK3-201ENST00000316763 RARSP54136 660 aaKnown RBP18.18■□□□□ 0.5
VRK3-201ENST00000316763 SULT6B1Q6IMI4 303 aa18.18■□□□□ 0.5
VRK3-201ENST00000316763 AEBP1Q8IUX7 1158 aa18.18■□□□□ 0.5
VRK3-201ENST00000316763 AXIN2Q9Y2T1 843 aa18.18■□□□□ 0.5
VRK3-201ENST00000316763 NEFMP07197 916 aa18.17■□□□□ 0.5
VRK3-201ENST00000316763 EYA1Q99502 592 aa18.17■□□□□ 0.5
VRK3-201ENST00000316763 TRIM35Q9UPQ4 493 aa18.17■□□□□ 0.5
VRK3-201ENST00000316763 NFE2L2Q16236 605 aa18.16■□□□□ 0.5
VRK3-201ENST00000316763 CT47B1P0C2W7 299 aaPredicted RBP18.15■□□□□ 0.5
VRK3-201ENST00000316763 RIPK4P57078 832 aa18.15■□□□□ 0.5
VRK3-201ENST00000316763 ILDR1Q86SU0 546 aaPredicted RBP18.15■□□□□ 0.5
VRK3-201ENST00000316763 DDRGK1Q96HY6 314 aa18.15■□□□□ 0.5
VRK3-201ENST00000316763 COL14A1Q05707 1796 aaKnown RBP18.15■□□□□ 0.5
VRK3-201ENST00000316763 LMO7Q8WWI1 1683 aa18.15■□□□□ 0.5
VRK3-201ENST00000316763 FAM161AQ3B820 660 aa18.15■□□□□ 0.5
VRK3-201ENST00000316763 SKAP1Q86WV1 359 aa18.15■□□□□ 0.5
VRK3-201ENST00000316763 FRAT1Q92837 279 aaPredicted RBP18.15■□□□□ 0.5
VRK3-201ENST00000316763 CLUAP1Q96AJ1 413 aa18.15■□□□□ 0.5
VRK3-201ENST00000316763 CAMTA1Q9Y6Y1 1673 aa18.14■□□□□ 0.49
VRK3-201ENST00000316763 ABCC6O95255 1503 aa18.13■□□□□ 0.49
VRK3-201ENST00000316763 PANK1Q8TE04 598 aa18.13■□□□□ 0.49
VRK3-201ENST00000316763 LTV1Q96GA3 475 aaPredicted RBP18.13■□□□□ 0.49
VRK3-201ENST00000316763 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
VRK3-201ENST00000316763 COG6Q9Y2V7 657 aa18.13■□□□□ 0.49
VRK3-201ENST00000316763 MEX3CQ5U5Q3 659 aaKnown RBP18.12■□□□□ 0.49
VRK3-201ENST00000316763 BTG4Q9NY30 223 aa18.12■□□□□ 0.49
VRK3-201ENST00000316763 PLCH1Q4KWH8 1693 aa18.12■□□□□ 0.49
VRK3-201ENST00000316763 NGLY1Q96IV0 654 aa18.11■□□□□ 0.49
VRK3-201ENST00000316763 IL16Q14005 1332 aa18.11■□□□□ 0.49
VRK3-201ENST00000316763 ANKRD24Q8TF21 1146 aa18.11■□□□□ 0.49
VRK3-201ENST00000316763 RGS3P49796 1198 aa18.1■□□□□ 0.49
VRK3-201ENST00000316763 RGPD2P0DJD1 1756 aa18.09■□□□□ 0.49
VRK3-201ENST00000316763 ERBB3P21860 1342 aa18.09■□□□□ 0.49
VRK3-201ENST00000316763 NCAPD2Q15021 1401 aa18.09■□□□□ 0.49
VRK3-201ENST00000316763 COL5A2P05997 1499 aaPredicted RBP18.09■□□□□ 0.49
VRK3-201ENST00000316763 SLIT2O94813 1529 aa18.09■□□□□ 0.49
VRK3-201ENST00000316763 NWD2Q9ULI1 1742 aa18.08■□□□□ 0.49
VRK3-201ENST00000316763 EVA1CP58658 441 aa18.08■□□□□ 0.49
VRK3-201ENST00000316763 NBPF6Q5VWK0 638 aa18.08■□□□□ 0.49
VRK3-201ENST00000316763 NBPF4Q96M43 638 aa18.08■□□□□ 0.49
VRK3-201ENST00000316763 IGHDP01880 384 aa18.08■□□□□ 0.48
VRK3-201ENST00000316763 LMOD3Q0VAK6 560 aa18.08■□□□□ 0.48
VRK3-201ENST00000316763 FNBP4Q8N3X1 1017 aaPredicted RBP18.08■□□□□ 0.48
VRK3-201ENST00000316763 STRN4Q9NRL3 753 aa18.08■□□□□ 0.48
VRK3-201ENST00000316763 NRAPQ86VF7 1730 aa18.06■□□□□ 0.48
VRK3-201ENST00000316763 CSB-PGBD3P0DP91 1061 aa18.06■□□□□ 0.48
VRK3-201ENST00000316763 C8orf34Q49A92 452 aa18.06■□□□□ 0.48
VRK3-201ENST00000316763 NBR1Q14596 966 aa18.06■□□□□ 0.48
VRK3-201ENST00000316763 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
VRK3-201ENST00000316763 WDR17Q8IZU2 1322 aa18.05■□□□□ 0.48
VRK3-201ENST00000316763 LARP1Q6PKG0 1096 aaKnown RBP18.05■□□□□ 0.48
VRK3-201ENST00000316763 BCL9LQ86UU0 1499 aa18.05■□□□□ 0.48
VRK3-201ENST00000316763 AFF2P51816 1311 aa18.04■□□□□ 0.48
VRK3-201ENST00000316763 CALD1Q05682 793 aaKnown RBP18.04■□□□□ 0.48
VRK3-201ENST00000316763 MTHFSDQ2M296 383 aaKnown RBP18.04■□□□□ 0.48
VRK3-201ENST00000316763 RTL5Q5HYW3 569 aaPredicted RBP18.04■□□□□ 0.48
VRK3-201ENST00000316763 UNC5CLQ8IV45 518 aa18.04■□□□□ 0.48
VRK3-201ENST00000316763 BCL2L13Q9BXK5 485 aa18.04■□□□□ 0.48
VRK3-201ENST00000316763 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
VRK3-201ENST00000316763 NLRP2Q9NX02 1062 aa18.04■□□□□ 0.48
VRK3-201ENST00000316763 USP21Q9UK80 565 aa18.04■□□□□ 0.48
VRK3-201ENST00000316763 FAM208AQ9UK61 1670 aaKnown RBP18.03■□□□□ 0.48
VRK3-201ENST00000316763 VIRMAQ69YN4 1812 aaKnown RBP18.03■□□□□ 0.48
VRK3-201ENST00000316763 RLBP1P12271 317 aa18.03■□□□□ 0.48
VRK3-201ENST00000316763 EXOSC9Q06265 439 aaKnown RBP18.03■□□□□ 0.48
VRK3-201ENST00000316763 TOM1L2Q6ZVM7 507 aa18.03■□□□□ 0.48
VRK3-201ENST00000316763 FTSJ3Q8IY81 847 aaKnown RBP18.03■□□□□ 0.48
VRK3-201ENST00000316763 GAS2L2Q8NHY3 880 aa18.03■□□□□ 0.48
VRK3-201ENST00000316763 TSR2Q969E8 191 aaKnown RBP18.03■□□□□ 0.48
VRK3-201ENST00000316763 RWDD1Q9H446 243 aaPredicted RBP18.03■□□□□ 0.48
VRK3-201ENST00000316763 DZIP1LQ8IYY4 767 aaKnown RBP18.02■□□□□ 0.48
VRK3-201ENST00000316763 DLG5Q8TDM6 1919 aa18.02■□□□□ 0.48
VRK3-201ENST00000316763 MVPQ14764 893 aaKnown RBP18.02■□□□□ 0.47
VRK3-201ENST00000316763 THUMPD2Q9BTF0 503 aaKnown RBP18.02■□□□□ 0.47
VRK3-201ENST00000316763 SMC4Q9NTJ3 1288 aa18.02■□□□□ 0.47
VRK3-201ENST00000316763 DAXXQ9UER7 740 aaPredicted RBP18.02■□□□□ 0.47
VRK3-201ENST00000316763 ZNF853P0CG23 659 aa18.01■□□□□ 0.47
VRK3-201ENST00000316763 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.01■□□□□ 0.47
VRK3-201ENST00000316763 CRB1P82279 1406 aa18■□□□□ 0.47
VRK3-201ENST00000316763 IFT57Q9NWB7 429 aa18■□□□□ 0.47
VRK3-201ENST00000316763 HTATSF1O43719 755 aaKnown RBP18■□□□□ 0.47
VRK3-201ENST00000316763 CARD10Q9BWT7 1032 aa18■□□□□ 0.47
VRK3-201ENST00000316763 USP35Q9P2H5 1018 aa17.99■□□□□ 0.47
VRK3-201ENST00000316763 TNNQ9UQP3 1299 aa17.99■□□□□ 0.47
VRK3-201ENST00000316763 GNAI1P63096 354 aa17.98■□□□□ 0.47
VRK3-201ENST00000316763 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
VRK3-201ENST00000316763 CFAP44Q96MT7 982 aa17.98■□□□□ 0.47
VRK3-201ENST00000316763 PCDHB15Q9Y5E8 787 aa17.98■□□□□ 0.47
VRK3-201ENST00000316763 VPS72Q15906 364 aa17.98■□□□□ 0.47
VRK3-201ENST00000316763 CCDC9Q9Y3X0 531 aaKnown RBP17.98■□□□□ 0.47
VRK3-201ENST00000316763 IPO8O15397 1037 aaKnown RBP17.97■□□□□ 0.47
VRK3-201ENST00000316763 SPATA31A5Q5VU36 1347 aa17.97■□□□□ 0.47
VRK3-201ENST00000316763 SPATA31A7Q8IWB4 1347 aa17.97■□□□□ 0.47
VRK3-201ENST00000316763 MCM10Q7L590 875 aa17.96■□□□□ 0.47
VRK3-201ENST00000316763 SSH1Q8WYL5 1049 aa17.96■□□□□ 0.47
VRK3-201ENST00000316763 DDX19BQ9UMR2 479 aa17.96■□□□□ 0.47
VRK3-201ENST00000316763 SPATA31A1Q5TZJ5 1347 aa17.96■□□□□ 0.47
VRK3-201ENST00000316763 KIF16BQ96L93 1317 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms