RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 MRPL50Q8N5N7 158 aaKnown RBP9.29□□□□□ -0.92
NPHP1-201ENST00000316534 MBIPQ9NS73 344 aa9.29□□□□□ -0.92
NPHP1-201ENST00000316534 TOGARAM1Q9Y4F4 1720 aa9.29□□□□□ -0.92
NPHP1-201ENST00000316534 SPATA31A3Q5VYP0 1347 aa9.29□□□□□ -0.92
NPHP1-201ENST00000316534 NLRP6P59044 892 aa9.29□□□□□ -0.92
NPHP1-201ENST00000316534 CADPS2Q86UW7 1296 aa9.29□□□□□ -0.92
NPHP1-201ENST00000316534 PROSER2Q86WR7 435 aaPredicted RBP9.29□□□□□ -0.92
NPHP1-201ENST00000316534 MAP3K5Q99683 1374 aa9.29□□□□□ -0.92
NPHP1-201ENST00000316534 HMOX1P09601 288 aa9.28□□□□□ -0.92
NPHP1-201ENST00000316534 SULT6B1Q6IMI4 303 aa9.28□□□□□ -0.92
NPHP1-201ENST00000316534 ABTB2Q8N961 1025 aa9.28□□□□□ -0.92
NPHP1-201ENST00000316534 NWD2Q9ULI1 1742 aa9.28□□□□□ -0.92
NPHP1-201ENST00000316534 KIF16BQ96L93 1317 aa9.28□□□□□ -0.92
NPHP1-201ENST00000316534 RLBP1P12271 317 aa9.27□□□□□ -0.92
NPHP1-201ENST00000316534 MTHFSDQ2M296 383 aaKnown RBP9.27□□□□□ -0.92
NPHP1-201ENST00000316534 SSH1Q8WYL5 1049 aa9.27□□□□□ -0.92
NPHP1-201ENST00000316534 TSR2Q969E8 191 aaKnown RBP9.27□□□□□ -0.92
NPHP1-201ENST00000316534 MSH5O43196 834 aa9.27□□□□□ -0.93
NPHP1-201ENST00000316534 ESCO1Q5FWF5 840 aa9.27□□□□□ -0.93
NPHP1-201ENST00000316534 GAS2L2Q8NHY3 880 aa9.27□□□□□ -0.93
NPHP1-201ENST00000316534 CCDC136Q96JN2 1154 aa9.27□□□□□ -0.93
NPHP1-201ENST00000316534 MVPQ14764 893 aaKnown RBP9.27□□□□□ -0.93
NPHP1-201ENST00000316534 KRT28Q7Z3Y7 464 aa9.27□□□□□ -0.93
NPHP1-201ENST00000316534 NUTM2FA1L443 756 aa9.26□□□□□ -0.93
NPHP1-201ENST00000316534 GCP02774 474 aa9.26□□□□□ -0.93
NPHP1-201ENST00000316534 NUP188Q5SRE5 1749 aa9.26□□□□□ -0.93
NPHP1-201ENST00000316534 NPHP3Q7Z494 1330 aa9.26□□□□□ -0.93
NPHP1-201ENST00000316534 PSME1Q06323 249 aa9.26□□□□□ -0.93
NPHP1-201ENST00000316534 ZNF831Q5JPB2 1677 aa9.26□□□□□ -0.93
NPHP1-201ENST00000316534 TCERG1O14776 1098 aaKnown RBP9.26□□□□□ -0.93
NPHP1-201ENST00000316534 ZKSCAN2Q63HK3 967 aa9.25□□□□□ -0.93
NPHP1-201ENST00000316534 ATF7IPQ6VMQ6 1270 aa9.25□□□□□ -0.93
NPHP1-201ENST00000316534 CLUAP1Q96AJ1 413 aa9.25□□□□□ -0.93
NPHP1-201ENST00000316534 RREB1Q92766 1687 aa9.25□□□□□ -0.93
NPHP1-201ENST00000316534 TRIM27P14373 513 aa9.25□□□□□ -0.93
NPHP1-201ENST00000316534 HDAC1Q13547 482 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-201ENST00000316534 COL5A2P05997 1499 aaPredicted RBP9.25□□□□□ -0.93
NPHP1-201ENST00000316534 BRINP3Q76B58 766 aa9.24□□□□□ -0.93
NPHP1-201ENST00000316534 ERBB3P21860 1342 aa9.24□□□□□ -0.93
NPHP1-201ENST00000316534 PHLPP1O60346 1717 aa9.24□□□□□ -0.93
NPHP1-201ENST00000316534 MEGF6O75095 1541 aa9.24□□□□□ -0.93
NPHP1-201ENST00000316534 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.24□□□□□ -0.93
NPHP1-201ENST00000316534 NEUROD2Q15784 382 aa9.24□□□□□ -0.93
NPHP1-201ENST00000316534 ZBTB40Q9NUA8 1239 aa9.24□□□□□ -0.93
NPHP1-201ENST00000316534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.24□□□□□ -0.93
NPHP1-201ENST00000316534 AMPHP49418 695 aa9.23□□□□□ -0.93
NPHP1-201ENST00000316534 NBPF6Q5VWK0 638 aa9.23□□□□□ -0.93
NPHP1-201ENST00000316534 C8orf58Q8NAV2 365 aa9.23□□□□□ -0.93
NPHP1-201ENST00000316534 NBPF4Q96M43 638 aa9.23□□□□□ -0.93
NPHP1-201ENST00000316534 ANP32EQ9BTT0 268 aa9.23□□□□□ -0.93
NPHP1-201ENST00000316534 NEFMP07197 916 aa9.23□□□□□ -0.93
NPHP1-201ENST00000316534 ATP10DQ9P241 1426 aa9.23□□□□□ -0.93
NPHP1-201ENST00000316534 FAM83GA6ND36 823 aa9.23□□□□□ -0.93
NPHP1-201ENST00000316534 DZIP1LQ8IYY4 767 aaKnown RBP9.23□□□□□ -0.93
NPHP1-201ENST00000316534 TSPYL6Q8N831 410 aa9.23□□□□□ -0.93
NPHP1-201ENST00000316534 TNNQ9UQP3 1299 aa9.23□□□□□ -0.93
NPHP1-201ENST00000316534 KDM6AO15550 1401 aaPredicted RBP9.23□□□□□ -0.93
NPHP1-201ENST00000316534 PPM1GO15355 546 aaPredicted RBP9.22□□□□□ -0.93
NPHP1-201ENST00000316534 HOXB7P09629 217 aa9.22□□□□□ -0.93
NPHP1-201ENST00000316534 PTPRCP08575 1304 aa9.22□□□□□ -0.93
NPHP1-201ENST00000316534 GNAT3A8MTJ3 354 aa9.22□□□□□ -0.93
NPHP1-201ENST00000316534 IGHDP01880 384 aa9.22□□□□□ -0.93
NPHP1-201ENST00000316534 ATF3P18847 181 aa9.22□□□□□ -0.93
NPHP1-201ENST00000316534 INTS3Q68E01 1043 aaKnown RBP9.22□□□□□ -0.93
NPHP1-201ENST00000316534 IL17REQ8NFR9 667 aa9.22□□□□□ -0.93
NPHP1-201ENST00000316534 RBM19Q9Y4C8 960 aaKnown RBP9.22□□□□□ -0.93
NPHP1-201ENST00000316534 DISP2A7MBM2 1401 aa9.22□□□□□ -0.93
NPHP1-201ENST00000316534 HAP1P54257 671 aaPredicted RBP9.22□□□□□ -0.93
NPHP1-201ENST00000316534 PANK1Q8TE04 598 aa9.22□□□□□ -0.93
NPHP1-201ENST00000316534 RBM33Q96EV2 1170 aaKnown RBP9.22□□□□□ -0.93
NPHP1-201ENST00000316534 NOB1Q9ULX3 412 aaKnown RBP9.22□□□□□ -0.93
NPHP1-201ENST00000316534 AXIN2Q9Y2T1 843 aa9.22□□□□□ -0.93
NPHP1-201ENST00000316534 ITGB4P16144 1822 aa9.22□□□□□ -0.93
NPHP1-201ENST00000316534 AMOTQ4VCS5 1084 aa9.21□□□□□ -0.93
NPHP1-201ENST00000316534 ARFGEF2Q9Y6D5 1785 aa9.21□□□□□ -0.93
NPHP1-201ENST00000316534 ZBTB7BO15156 539 aaPredicted RBP9.21□□□□□ -0.94
NPHP1-201ENST00000316534 FOXO3O43524 673 aa9.21□□□□□ -0.94
NPHP1-201ENST00000316534 HSPA2P54652 639 aa9.21□□□□□ -0.94
NPHP1-201ENST00000316534 TWISTNBQ3B726 338 aaPredicted RBP9.21□□□□□ -0.94
NPHP1-201ENST00000316534 THUMPD2Q9BTF0 503 aaKnown RBP9.21□□□□□ -0.94
NPHP1-201ENST00000316534 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.94
NPHP1-201ENST00000316534 KCPQ6ZWJ8 1503 aa9.21□□□□□ -0.94
NPHP1-201ENST00000316534 ZNF335Q9H4Z2 1342 aaPredicted RBP9.21□□□□□ -0.94
NPHP1-201ENST00000316534 IPO8O15397 1037 aaKnown RBP9.21□□□□□ -0.94
NPHP1-201ENST00000316534 AKAP4Q5JQC9 854 aa9.21□□□□□ -0.94
NPHP1-201ENST00000316534 DDX19BQ9UMR2 479 aa9.21□□□□□ -0.94
NPHP1-201ENST00000316534 SMC5Q8IY18 1101 aa9.2□□□□□ -0.94
NPHP1-201ENST00000316534 SMC4Q9NTJ3 1288 aa9.2□□□□□ -0.94
NPHP1-201ENST00000316534 TNS2Q63HR2 1409 aa9.2□□□□□ -0.94
NPHP1-201ENST00000316534 TJP1Q07157 1748 aa9.19□□□□□ -0.94
NPHP1-201ENST00000316534 BACH2Q9BYV9 841 aa9.19□□□□□ -0.94
NPHP1-201ENST00000316534 MCM10Q7L590 875 aa9.19□□□□□ -0.94
NPHP1-201ENST00000316534 ANKRD24Q8TF21 1146 aa9.19□□□□□ -0.94
NPHP1-201ENST00000316534 COG6Q9Y2V7 657 aa9.19□□□□□ -0.94
NPHP1-201ENST00000316534 DCTN1Q14203 1278 aa9.18□□□□□ -0.94
NPHP1-201ENST00000316534 TMEM57Q8N5G2 664 aa9.18□□□□□ -0.94
NPHP1-201ENST00000316534 SLAIN2Q9P270 581 aa9.18□□□□□ -0.94
NPHP1-201ENST00000316534 TAF7Q15545 349 aaPredicted RBP9.17□□□□□ -0.94
NPHP1-201ENST00000316534 API5Q9BZZ5 524 aaKnown RBP9.17□□□□□ -0.94
NPHP1-201ENST00000316534 PAK3O75914 559 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms