RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
ABCD3-201ENST00000315713 ZNF784Q8NCA9 323 aaPredicted RBP16.8■□□□□ 0.28
ABCD3-201ENST00000315713 LRRC4BQ9NT99 713 aa16.8■□□□□ 0.28
ABCD3-201ENST00000315713 MAP3K5Q99683 1374 aa16.79■□□□□ 0.28
ABCD3-201ENST00000315713 LTV1Q96GA3 475 aaPredicted RBP16.79■□□□□ 0.28
ABCD3-201ENST00000315713 ARXQ96QS3 562 aa16.79■□□□□ 0.28
ABCD3-201ENST00000315713 MEGF6O75095 1541 aa16.79■□□□□ 0.28
ABCD3-201ENST00000315713 ITGB4P16144 1822 aa16.79■□□□□ 0.28
ABCD3-201ENST00000315713 NSD2O96028 1365 aa16.77■□□□□ 0.28
ABCD3-201ENST00000315713 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
ABCD3-201ENST00000315713 TOGARAM1Q9Y4F4 1720 aa16.77■□□□□ 0.28
ABCD3-201ENST00000315713 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
ABCD3-201ENST00000315713 IP6K1Q92551 441 aa16.76■□□□□ 0.27
ABCD3-201ENST00000315713 KCNQ4P56696 695 aa16.75■□□□□ 0.27
ABCD3-201ENST00000315713 AKT1S1Q96B36 256 aa16.75■□□□□ 0.27
ABCD3-201ENST00000315713 MAP3K19Q56UN5 1328 aa16.74■□□□□ 0.27
ABCD3-201ENST00000315713 PNPLA7Q6ZV29 1317 aa16.74■□□□□ 0.27
ABCD3-201ENST00000315713 HOXC9P31274 260 aa16.73■□□□□ 0.27
ABCD3-201ENST00000315713 KLHL34Q8N239 644 aa16.73■□□□□ 0.27
ABCD3-201ENST00000315713 SYTL4Q96C24 671 aaPredicted RBP16.73■□□□□ 0.27
ABCD3-201ENST00000315713 PKD1L3Q7Z443 1732 aa16.73■□□□□ 0.27
ABCD3-201ENST00000315713 FBLN1P23142 703 aa16.72■□□□□ 0.27
ABCD3-201ENST00000315713 SLC27A3Q5K4L6 730 aa16.72■□□□□ 0.27
ABCD3-201ENST00000315713 RTL1A6NKG5 1358 aa16.72■□□□□ 0.27
ABCD3-201ENST00000315713 ANKRD26Q9UPS8 1709 aa16.71■□□□□ 0.27
ABCD3-201ENST00000315713 PRIM1P49642 420 aaKnown RBP16.71■□□□□ 0.27
ABCD3-201ENST00000315713 COG3Q96JB2 828 aa16.71■□□□□ 0.27
ABCD3-201ENST00000315713 UBR3Q6ZT12 1888 aa16.71■□□□□ 0.27
ABCD3-201ENST00000315713 AMPHP49418 695 aa16.69■□□□□ 0.26
ABCD3-201ENST00000315713 GPR162Q16538 588 aa16.69■□□□□ 0.26
ABCD3-201ENST00000315713 TFCP2L1Q9NZI6 479 aa16.69■□□□□ 0.26
ABCD3-201ENST00000315713 MAP2P11137 1827 aaKnown RBP16.68■□□□□ 0.26
ABCD3-201ENST00000315713 C4BP0C0L5 1744 aa16.68■□□□□ 0.26
ABCD3-201ENST00000315713 POLD1P28340 1107 aa16.68■□□□□ 0.26
ABCD3-201ENST00000315713 NLGN2Q8NFZ4 835 aa16.68■□□□□ 0.26
ABCD3-201ENST00000315713 SLC16A10Q8TF71 515 aa16.68■□□□□ 0.26
ABCD3-201ENST00000315713 NSD3Q9BZ95 1437 aa16.68■□□□□ 0.26
ABCD3-201ENST00000315713 RRS1Q15050 365 aaKnown RBP16.67■□□□□ 0.26
ABCD3-201ENST00000315713 PELP1Q8IZL8 1130 aaKnown RBP16.67■□□□□ 0.26
ABCD3-201ENST00000315713 USHBP1Q8N6Y0 703 aa16.67■□□□□ 0.26
ABCD3-201ENST00000315713 ZCRB1Q8TBF4 217 aaKnown RBP16.67■□□□□ 0.26
ABCD3-201ENST00000315713 SMG6Q86US8 1419 aaKnown RBP16.67■□□□□ 0.26
ABCD3-201ENST00000315713 KIF7Q2M1P5 1343 aa16.67■□□□□ 0.26
ABCD3-201ENST00000315713 CCNL1Q9UK58 526 aaPredicted RBP16.66■□□□□ 0.26
ABCD3-201ENST00000315713 CARD14Q9BXL6 1004 aa16.65■□□□□ 0.26
ABCD3-201ENST00000315713 CEP350Q5VT06 3117 aa16.65■□□□□ 0.26
ABCD3-201ENST00000315713 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
ABCD3-201ENST00000315713 NBPF6Q5VWK0 638 aa16.64■□□□□ 0.25
ABCD3-201ENST00000315713 NBPF4Q96M43 638 aa16.64■□□□□ 0.25
ABCD3-201ENST00000315713 GGNBP2Q9H3C7 697 aa16.64■□□□□ 0.25
ABCD3-201ENST00000315713 PANK3Q9H999 370 aa16.64■□□□□ 0.25
ABCD3-201ENST00000315713 FYB1O15117 783 aa16.63■□□□□ 0.25
ABCD3-201ENST00000315713 C1QTNF8P60827 252 aa16.63■□□□□ 0.25
ABCD3-201ENST00000315713 MSH5O43196 834 aa16.62■□□□□ 0.25
ABCD3-201ENST00000315713 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
ABCD3-201ENST00000315713 MSL1Q68DK7 614 aa16.62■□□□□ 0.25
ABCD3-201ENST00000315713 CGNL1Q0VF96 1302 aa16.62■□□□□ 0.25
ABCD3-201ENST00000315713 COL23A1Q86Y22 540 aaPredicted RBP16.61■□□□□ 0.25
ABCD3-201ENST00000315713 FLT4P35916 1363 aa16.61■□□□□ 0.25
ABCD3-201ENST00000315713 YBX3P16989 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
ABCD3-201ENST00000315713 RAPGEF4Q8WZA2 1011 aa16.6■□□□□ 0.25
ABCD3-201ENST00000315713 PCDH11XQ9BZA7 1347 aa16.6■□□□□ 0.25
ABCD3-201ENST00000315713 PCDH11YQ9BZA8 1340 aa16.6■□□□□ 0.25
ABCD3-201ENST00000315713 INSRP06213 1382 aa16.6■□□□□ 0.25
ABCD3-201ENST00000315713 PALLDQ8WX93 1383 aa16.6■□□□□ 0.25
ABCD3-201ENST00000315713 WASHC2AQ641Q2 1341 aa16.59■□□□□ 0.25
ABCD3-201ENST00000315713 GIGYF1O75420 1035 aaPredicted RBP16.58■□□□□ 0.24
ABCD3-201ENST00000315713 HSP90AB2PQ58FF8 381 aa16.58■□□□□ 0.24
ABCD3-201ENST00000315713 NCAPD2Q15021 1401 aa16.57■□□□□ 0.24
ABCD3-201ENST00000315713 TATP17735 454 aaPredicted RBP16.57■□□□□ 0.24
ABCD3-201ENST00000315713 KNSTRNQ9Y448 316 aa16.57■□□□□ 0.24
ABCD3-201ENST00000315713 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
ABCD3-201ENST00000315713 KIAA1551Q9HCM1 1747 aa16.56■□□□□ 0.24
ABCD3-201ENST00000315713 KIF24Q5T7B8 1368 aa16.55■□□□□ 0.24
ABCD3-201ENST00000315713 N4BP2Q86UW6 1770 aaPredicted RBP16.55■□□□□ 0.24
ABCD3-201ENST00000315713 ATP10DQ9P241 1426 aa16.54■□□□□ 0.24
ABCD3-201ENST00000315713 COL5A3P25940 1745 aaPredicted RBP16.54■□□□□ 0.24
ABCD3-201ENST00000315713 CYP27B1O15528 508 aa16.54■□□□□ 0.24
ABCD3-201ENST00000315713 MPRIPQ6WCQ1 1025 aa16.54■□□□□ 0.24
ABCD3-201ENST00000315713 AMIGO3Q86WK7 504 aa16.54■□□□□ 0.24
ABCD3-201ENST00000315713 EMILIN1Q9Y6C2 1016 aa16.53■□□□□ 0.24
ABCD3-201ENST00000315713 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
ABCD3-201ENST00000315713 BRCA1P38398 1863 aaKnown RBP16.52■□□□□ 0.24
ABCD3-201ENST00000315713 VIRMAQ69YN4 1812 aaKnown RBP16.52■□□□□ 0.24
ABCD3-201ENST00000315713 GRIN3BO60391 1043 aa16.51■□□□□ 0.23
ABCD3-201ENST00000315713 TNNT2P45379 298 aaPredicted RBP16.51■□□□□ 0.23
ABCD3-201ENST00000315713 SMIM5Q71RC9 77 aa16.51■□□□□ 0.23
ABCD3-201ENST00000315713 ZNF831Q5JPB2 1677 aa16.5■□□□□ 0.23
ABCD3-201ENST00000315713 CICQ96RK0 1608 aaPredicted RBP16.5■□□□□ 0.23
ABCD3-201ENST00000315713 PHF14O94880 888 aa16.5■□□□□ 0.23
ABCD3-201ENST00000315713 AK7Q96M32 723 aa16.5■□□□□ 0.23
ABCD3-201ENST00000315713 ADCY9O60503 1353 aa16.5■□□□□ 0.23
ABCD3-201ENST00000315713 MYH14Q7Z406 1995 aaKnown RBP16.49■□□□□ 0.23
ABCD3-201ENST00000315713 PPM1GO15355 546 aaPredicted RBP16.49■□□□□ 0.23
ABCD3-201ENST00000315713 MORC1Q86VD1 984 aa16.49■□□□□ 0.23
ABCD3-201ENST00000315713 CD2APQ9Y5K6 639 aa16.49■□□□□ 0.23
ABCD3-201ENST00000315713 FLAD1Q8NFF5 587 aa16.48■□□□□ 0.23
ABCD3-201ENST00000315713 PIGBQ92521 554 aa16.48■□□□□ 0.23
ABCD3-201ENST00000315713 SMARCC1Q92922 1105 aaPredicted RBP16.48■□□□□ 0.23
ABCD3-201ENST00000315713 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms