RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 MEGF6O75095 1541 aa21.16■□□□□ 0.98
TUBB3-201ENST00000315491 AMOTQ4VCS5 1084 aa21.16■□□□□ 0.98
TUBB3-201ENST00000315491 UNC5CLQ8IV45 518 aa21.16■□□□□ 0.98
TUBB3-201ENST00000315491 PLEKHG2Q9H7P9 1386 aa21.15■□□□□ 0.98
TUBB3-201ENST00000315491 LMOD3Q0VAK6 560 aa21.15■□□□□ 0.98
TUBB3-201ENST00000315491 PDE3BQ13370 1112 aa21.15■□□□□ 0.98
TUBB3-201ENST00000315491 BCL9LQ86UU0 1499 aa21.14■□□□□ 0.98
TUBB3-201ENST00000315491 USP35Q9P2H5 1018 aa21.14■□□□□ 0.97
TUBB3-201ENST00000315491 IL2RBP14784 551 aa21.13■□□□□ 0.97
TUBB3-201ENST00000315491 OVOS2A0A0G2JMS6 1433 aa21.12■□□□□ 0.97
TUBB3-201ENST00000315491 GOLGA2Q08379 1002 aa21.12■□□□□ 0.97
TUBB3-201ENST00000315491 WDR63Q8IWG1 891 aa21.12■□□□□ 0.97
TUBB3-201ENST00000315491 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.12■□□□□ 0.97
TUBB3-201ENST00000315491 USP21Q9UK80 565 aa21.12■□□□□ 0.97
TUBB3-201ENST00000315491 SPATA31A1Q5TZJ5 1347 aa21.11■□□□□ 0.97
TUBB3-201ENST00000315491 VPS72Q15906 364 aa21.1■□□□□ 0.97
TUBB3-201ENST00000315491 ZNF530Q6P9A1 599 aaPredicted RBP21.1■□□□□ 0.97
TUBB3-201ENST00000315491 CDCA7LQ96GN5 454 aa21.1■□□□□ 0.97
TUBB3-201ENST00000315491 SPG7Q9UQ90 795 aa21.1■□□□□ 0.97
TUBB3-201ENST00000315491 SPATA31A5Q5VU36 1347 aa21.1■□□□□ 0.97
TUBB3-201ENST00000315491 SPATA31A7Q8IWB4 1347 aa21.1■□□□□ 0.97
TUBB3-201ENST00000315491 DLG5Q8TDM6 1919 aa21.1■□□□□ 0.97
TUBB3-201ENST00000315491 PARP4Q9UKK3 1724 aaKnown RBP21.1■□□□□ 0.97
TUBB3-201ENST00000315491 THRAP3Q9Y2W1 955 aaKnown RBP21.1■□□□□ 0.97
TUBB3-201ENST00000315491 CCDC9Q9Y3X0 531 aaKnown RBP21.1■□□□□ 0.97
TUBB3-201ENST00000315491 AFF2P51816 1311 aa21.1■□□□□ 0.97
TUBB3-201ENST00000315491 MAP3K5Q99683 1374 aa21.09■□□□□ 0.97
TUBB3-201ENST00000315491 GNAT3A8MTJ3 354 aa21.09■□□□□ 0.97
TUBB3-201ENST00000315491 HTATSF1O43719 755 aaKnown RBP21.09■□□□□ 0.97
TUBB3-201ENST00000315491 RTF1Q92541 710 aaKnown RBP21.09■□□□□ 0.97
TUBB3-201ENST00000315491 DISP2A7MBM2 1401 aa21.09■□□□□ 0.97
TUBB3-201ENST00000315491 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.08■□□□□ 0.97
TUBB3-201ENST00000315491 AKAP4Q5JQC9 854 aa21.08■□□□□ 0.97
TUBB3-201ENST00000315491 DCTN1Q14203 1278 aa21.08■□□□□ 0.96
TUBB3-201ENST00000315491 C1orf141Q5JVX7 400 aa21.08■□□□□ 0.96
TUBB3-201ENST00000315491 PKD1L3Q7Z443 1732 aa21.07■□□□□ 0.96
TUBB3-201ENST00000315491 SLFN5Q08AF3 891 aa21.07■□□□□ 0.96
TUBB3-201ENST00000315491 THUMPD2Q9BTF0 503 aaKnown RBP21.07■□□□□ 0.96
TUBB3-201ENST00000315491 IL16Q14005 1332 aa21.06■□□□□ 0.96
TUBB3-201ENST00000315491 E9PSI1 815 aa21.06■□□□□ 0.96
TUBB3-201ENST00000315491 CALD1Q05682 793 aaKnown RBP21.06■□□□□ 0.96
TUBB3-201ENST00000315491 MCM10Q7L590 875 aa21.06■□□□□ 0.96
TUBB3-201ENST00000315491 ZCRB1Q8TBF4 217 aaKnown RBP21.06■□□□□ 0.96
TUBB3-201ENST00000315491 SPINK5Q9NQ38 1064 aaPredicted RBP21.06■□□□□ 0.96
TUBB3-201ENST00000315491 ANP32EQ9BTT0 268 aa21.05■□□□□ 0.96
TUBB3-201ENST00000315491 CDCA7Q9BWT1 371 aaPredicted RBP21.05■□□□□ 0.96
TUBB3-201ENST00000315491 PHKG2P15735 406 aa21.04■□□□□ 0.96
TUBB3-201ENST00000315491 BARGINQ6ZT62 677 aa21.04■□□□□ 0.96
TUBB3-201ENST00000315491 IFNL2Q8IZJ0 200 aa21.04■□□□□ 0.96
TUBB3-201ENST00000315491 SUPT16HQ9Y5B9 1047 aaKnown RBP21.04■□□□□ 0.96
TUBB3-201ENST00000315491 PCDH11XQ9BZA7 1347 aa21.03■□□□□ 0.96
TUBB3-201ENST00000315491 PCDH11YQ9BZA8 1340 aa21.03■□□□□ 0.96
TUBB3-201ENST00000315491 WNK3Q9BYP7 1800 aa21.03■□□□□ 0.96
TUBB3-201ENST00000315491 TRMT2AQ8IZ69 625 aaKnown RBP21.02■□□□□ 0.96
TUBB3-201ENST00000315491 IL17REQ8NFR9 667 aa21.02■□□□□ 0.96
TUBB3-201ENST00000315491 CYP27B1O15528 508 aa21.02■□□□□ 0.96
TUBB3-201ENST00000315491 DUSP27Q5VZP5 1158 aa21.02■□□□□ 0.96
TUBB3-201ENST00000315491 TRPC5Q9UL62 973 aaPredicted RBP21.02■□□□□ 0.96
TUBB3-201ENST00000315491 ATRNO75882 1429 aa21.02■□□□□ 0.95
TUBB3-201ENST00000315491 MYH16Q9H6N6 1097 aa21.01■□□□□ 0.95
TUBB3-201ENST00000315491 MPRIPQ6WCQ1 1025 aa21■□□□□ 0.95
TUBB3-201ENST00000315491 IFT57Q9NWB7 429 aa21■□□□□ 0.95
TUBB3-201ENST00000315491 RNMTO43148 476 aaKnown RBP21■□□□□ 0.95
TUBB3-201ENST00000315491 LGR6Q9HBX8 967 aa21■□□□□ 0.95
TUBB3-201ENST00000315491 CEMIPQ8WUJ3 1361 aa20.99■□□□□ 0.95
TUBB3-201ENST00000315491 EXOC5O00471 708 aa20.99■□□□□ 0.95
TUBB3-201ENST00000315491 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
TUBB3-201ENST00000315491 GNAI1P63096 354 aa20.99■□□□□ 0.95
TUBB3-201ENST00000315491 GJD4Q96KN9 370 aaPredicted RBP20.99■□□□□ 0.95
TUBB3-201ENST00000315491 LAS1LQ9Y4W2 734 aaKnown RBP20.99■□□□□ 0.95
TUBB3-201ENST00000315491 LRRC37A3O60309 1634 aa20.99■□□□□ 0.95
TUBB3-201ENST00000315491 TNS2Q63HR2 1409 aa20.98■□□□□ 0.95
TUBB3-201ENST00000315491 SHANK3Q9BYB0 1731 aa20.98■□□□□ 0.95
TUBB3-201ENST00000315491 ZNF853P0CG23 659 aa20.98■□□□□ 0.95
TUBB3-201ENST00000315491 FAM98CQ17RN3 349 aaKnown RBP20.98■□□□□ 0.95
TUBB3-201ENST00000315491 DDX54Q8TDD1 881 aaKnown RBP20.98■□□□□ 0.95
TUBB3-201ENST00000315491 CFAP44Q96MT7 982 aa20.97■□□□□ 0.95
TUBB3-201ENST00000315491 QTRT2Q9H974 415 aaKnown RBP20.97■□□□□ 0.95
TUBB3-201ENST00000315491 KDM6AO15550 1401 aaPredicted RBP20.96■□□□□ 0.95
TUBB3-201ENST00000315491 FANCIQ9NVI1 1328 aa20.96■□□□□ 0.95
TUBB3-201ENST00000315491 GLI3P10071 1580 aa20.96■□□□□ 0.95
TUBB3-201ENST00000315491 DDB1Q16531 1140 aa20.96■□□□□ 0.95
TUBB3-201ENST00000315491 TSR2Q969E8 191 aaKnown RBP20.96■□□□□ 0.95
TUBB3-201ENST00000315491 DCAF5Q96JK2 942 aa20.96■□□□□ 0.95
TUBB3-201ENST00000315491 ADAMTS7Q9UKP4 1686 aa20.96■□□□□ 0.95
TUBB3-201ENST00000315491 NKX1-1Q15270 411 aaPredicted RBP20.95■□□□□ 0.94
TUBB3-201ENST00000315491 TEFQ10587 303 aa20.95■□□□□ 0.94
TUBB3-201ENST00000315491 ZNF772Q68DY9 489 aaPredicted RBP20.95■□□□□ 0.94
TUBB3-201ENST00000315491 TSHZ2Q9NRE2 1034 aa20.95■□□□□ 0.94
TUBB3-201ENST00000315491 CHL1O00533 1208 aa20.94■□□□□ 0.94
TUBB3-201ENST00000315491 MBIPQ9NS73 344 aa20.94■□□□□ 0.94
TUBB3-201ENST00000315491 TAF7Q15545 349 aaPredicted RBP20.93■□□□□ 0.94
TUBB3-201ENST00000315491 BABAM1Q9NWV8 329 aa20.92■□□□□ 0.94
TUBB3-201ENST00000315491 SCN11AQ9UI33 1791 aa20.91■□□□□ 0.94
TUBB3-201ENST00000315491 A0A0G2JS52 829 aa20.91■□□□□ 0.94
TUBB3-201ENST00000315491 TSPYL4Q9UJ04 414 aa20.91■□□□□ 0.94
TUBB3-201ENST00000315491 THSD7AQ9UPZ6 1657 aa20.91■□□□□ 0.94
TUBB3-201ENST00000315491 SLC52A2Q9HAB3 445 aa20.9■□□□□ 0.94
TUBB3-201ENST00000315491 MIS18AQ9NYP9 233 aa20.9■□□□□ 0.94
TUBB3-201ENST00000315491 MRC1P22897 1456 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms