RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PLEKHG5O94827 1062 aa23.38■■□□□ 1.33
CCDC43-201ENST00000315286 GCP02774 474 aa23.38■■□□□ 1.33
CCDC43-201ENST00000315286 ATF3P18847 181 aa23.38■■□□□ 1.33
CCDC43-201ENST00000315286 USHBP1Q8N6Y0 703 aa23.38■■□□□ 1.33
CCDC43-201ENST00000315286 KIF1AQ12756 1690 aa23.38■■□□□ 1.33
CCDC43-201ENST00000315286 MIS18AQ9NYP9 233 aa23.37■■□□□ 1.33
CCDC43-201ENST00000315286 ZBTB40Q9NUA8 1239 aa23.37■■□□□ 1.33
CCDC43-201ENST00000315286 KIAA0232Q92628 1395 aa23.36■■□□□ 1.33
CCDC43-201ENST00000315286 HTATSF1O43719 755 aaKnown RBP23.36■■□□□ 1.33
CCDC43-201ENST00000315286 NBPF6Q5VWK0 638 aa23.36■■□□□ 1.33
CCDC43-201ENST00000315286 NBPF4Q96M43 638 aa23.36■■□□□ 1.33
CCDC43-201ENST00000315286 SLIT3O75094 1523 aa23.35■■□□□ 1.33
CCDC43-201ENST00000315286 PHRF1Q9P1Y6 1649 aaKnown RBP23.35■■□□□ 1.33
CCDC43-201ENST00000315286 MST1RQ04912 1400 aa23.35■■□□□ 1.33
CCDC43-201ENST00000315286 GNAT3A8MTJ3 354 aa23.34■■□□□ 1.33
CCDC43-201ENST00000315286 ARHGEF25Q86VW2 580 aa23.34■■□□□ 1.33
CCDC43-201ENST00000315286 USP19O94966 1318 aa23.33■■□□□ 1.33
CCDC43-201ENST00000315286 ANP32AP39687 249 aaKnown RBP23.33■■□□□ 1.33
CCDC43-201ENST00000315286 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.32
CCDC43-201ENST00000315286 TSPYL4Q9UJ04 414 aa23.32■■□□□ 1.32
CCDC43-201ENST00000315286 RGPD2P0DJD1 1756 aa23.32■■□□□ 1.32
CCDC43-201ENST00000315286 HAP1P54257 671 aaPredicted RBP23.32■■□□□ 1.32
CCDC43-201ENST00000315286 FAM161AQ3B820 660 aa23.32■■□□□ 1.32
CCDC43-201ENST00000315286 DCCP43146 1447 aa23.32■■□□□ 1.32
CCDC43-201ENST00000315286 ABCC4O15439 1325 aa23.31■■□□□ 1.32
CCDC43-201ENST00000315286 KDM4FA0A1W2PPD8 638 aa23.31■■□□□ 1.32
CCDC43-201ENST00000315286 HDAC1Q13547 482 aaPredicted RBP23.31■■□□□ 1.32
CCDC43-201ENST00000315286 PDZRN3Q9UPQ7 1066 aa23.31■■□□□ 1.32
CCDC43-201ENST00000315286 MSH6P52701 1360 aa23.31■■□□□ 1.32
CCDC43-201ENST00000315286 C8orf34Q49A92 452 aa23.31■■□□□ 1.32
CCDC43-201ENST00000315286 MAP3K5Q99683 1374 aa23.3■■□□□ 1.32
CCDC43-201ENST00000315286 ZBTB7BO15156 539 aaPredicted RBP23.3■■□□□ 1.32
CCDC43-201ENST00000315286 IL17REQ8NFR9 667 aa23.3■■□□□ 1.32
CCDC43-201ENST00000315286 DDX17Q92841 729 aaKnown RBP23.3■■□□□ 1.32
CCDC43-201ENST00000315286 LRRC59Q96AG4 307 aaKnown RBP23.3■■□□□ 1.32
CCDC43-201ENST00000315286 API5Q9BZZ5 524 aaKnown RBP23.3■■□□□ 1.32
CCDC43-201ENST00000315286 NPM2Q86SE8 214 aaKnown RBP23.29■■□□□ 1.32
CCDC43-201ENST00000315286 LRRC37A3O60309 1634 aa23.29■■□□□ 1.32
CCDC43-201ENST00000315286 CADPS2Q86UW7 1296 aa23.28■■□□□ 1.32
CCDC43-201ENST00000315286 ALS2Q96Q42 1657 aa23.28■■□□□ 1.32
CCDC43-201ENST00000315286 AXIN2Q9Y2T1 843 aa23.26■■□□□ 1.31
CCDC43-201ENST00000315286 LMTK3Q96Q04 1460 aa23.25■■□□□ 1.31
CCDC43-201ENST00000315286 IPO9Q96P70 1041 aaKnown RBP23.25■■□□□ 1.31
CCDC43-201ENST00000315286 ANKRD24Q8TF21 1146 aa23.24■■□□□ 1.31
CCDC43-201ENST00000315286 CHMP4BQ9H444 224 aaKnown RBP23.24■■□□□ 1.31
CCDC43-201ENST00000315286 STRCQ7RTU9 1775 aa23.24■■□□□ 1.31
CCDC43-201ENST00000315286 MED1Q15648 1581 aaPredicted RBP23.23■■□□□ 1.31
CCDC43-201ENST00000315286 XIRP1Q702N8 1843 aaKnown RBP23.23■■□□□ 1.31
CCDC43-201ENST00000315286 ZC3H6P61129 1189 aaKnown RBP23.23■■□□□ 1.31
CCDC43-201ENST00000315286 TAF7Q15545 349 aaPredicted RBP23.23■■□□□ 1.31
CCDC43-201ENST00000315286 SMC5Q8IY18 1101 aa23.23■■□□□ 1.31
CCDC43-201ENST00000315286 SLC4A2P04920 1241 aa23.22■■□□□ 1.31
CCDC43-201ENST00000315286 RGPD5Q99666 1765 aa23.22■■□□□ 1.31
CCDC43-201ENST00000315286 C1orf115Q9H7X2 142 aa23.21■■□□□ 1.31
CCDC43-201ENST00000315286 RGS12O14924 1447 aa23.21■■□□□ 1.31
CCDC43-201ENST00000315286 NPHP3Q7Z494 1330 aa23.21■■□□□ 1.31
CCDC43-201ENST00000315286 INTS3Q68E01 1043 aaKnown RBP23.2■■□□□ 1.3
CCDC43-201ENST00000315286 PTPRCP08575 1304 aa23.2■■□□□ 1.3
CCDC43-201ENST00000315286 NCAPD2Q15021 1401 aa23.2■■□□□ 1.3
CCDC43-201ENST00000315286 BABAM1Q9NWV8 329 aa23.2■■□□□ 1.3
CCDC43-201ENST00000315286 CEMIPQ8WUJ3 1361 aa23.19■■□□□ 1.3
CCDC43-201ENST00000315286 PLEKHO1Q53GL0 409 aaPredicted RBP23.18■■□□□ 1.3
CCDC43-201ENST00000315286 LGR6Q9HBX8 967 aa23.18■■□□□ 1.3
CCDC43-201ENST00000315286 G2E3Q7L622 706 aa23.17■■□□□ 1.3
CCDC43-201ENST00000315286 VIRMAQ69YN4 1812 aaKnown RBP23.17■■□□□ 1.3
CCDC43-201ENST00000315286 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
CCDC43-201ENST00000315286 AMOTQ4VCS5 1084 aa23.16■■□□□ 1.3
CCDC43-201ENST00000315286 AKAP4Q5JQC9 854 aa23.16■■□□□ 1.3
CCDC43-201ENST00000315286 CABLES1Q8TDN4 633 aa23.16■■□□□ 1.3
CCDC43-201ENST00000315286 ANP32EQ9BTT0 268 aa23.16■■□□□ 1.3
CCDC43-201ENST00000315286 NOP58Q9Y2X3 529 aaKnown RBP23.16■■□□□ 1.3
CCDC43-201ENST00000315286 ERICH6Q7L0X2 663 aa23.15■■□□□ 1.3
CCDC43-201ENST00000315286 SIRT2Q8IXJ6 389 aa23.15■■□□□ 1.3
CCDC43-201ENST00000315286 PXDNQ92626 1479 aa23.15■■□□□ 1.3
CCDC43-201ENST00000315286 CAMTA1Q9Y6Y1 1673 aa23.15■■□□□ 1.3
CCDC43-201ENST00000315286 ERBB3P21860 1342 aa23.15■■□□□ 1.3
CCDC43-201ENST00000315286 LMO7Q8WWI1 1683 aa23.15■■□□□ 1.3
CCDC43-201ENST00000315286 TNS3Q68CZ2 1445 aa23.15■■□□□ 1.3
CCDC43-201ENST00000315286 ZNF335Q9H4Z2 1342 aaPredicted RBP23.14■■□□□ 1.29
CCDC43-201ENST00000315286 SPATA31A3Q5VYP0 1347 aa23.13■■□□□ 1.29
CCDC43-201ENST00000315286 CCDC30Q5VVM6 783 aa23.13■■□□□ 1.29
CCDC43-201ENST00000315286 BRINP3Q76B58 766 aa23.13■■□□□ 1.29
CCDC43-201ENST00000315286 STK31Q9BXU1 1019 aa23.13■■□□□ 1.29
CCDC43-201ENST00000315286 NUCB1Q02818 461 aa23.12■■□□□ 1.29
CCDC43-201ENST00000315286 MPRIPQ6WCQ1 1025 aa23.12■■□□□ 1.29
CCDC43-201ENST00000315286 ZBTB47Q9UFB7 747 aaPredicted RBP23.12■■□□□ 1.29
CCDC43-201ENST00000315286 SOS1Q07889 1333 aaPredicted RBP23.12■■□□□ 1.29
CCDC43-201ENST00000315286 NECTIN2Q92692 538 aa23.12■■□□□ 1.29
CCDC43-201ENST00000315286 COL18A1P39060 1754 aa23.11■■□□□ 1.29
CCDC43-201ENST00000315286 C1orf141Q5JVX7 400 aa23.1■■□□□ 1.29
CCDC43-201ENST00000315286 CACNA1FO60840 1977 aa23.1■■□□□ 1.29
CCDC43-201ENST00000315286 FAM208AQ9UK61 1670 aaKnown RBP23.1■■□□□ 1.29
CCDC43-201ENST00000315286 F6X3S4 739 aa23.1■■□□□ 1.29
CCDC43-201ENST00000315286 GCC1Q96CN9 775 aa23.1■■□□□ 1.29
CCDC43-201ENST00000315286 SEC24BO95487 1268 aa23.09■■□□□ 1.29
CCDC43-201ENST00000315286 RNMTO43148 476 aaKnown RBP23.09■■□□□ 1.29
CCDC43-201ENST00000315286 TEFQ10587 303 aa23.09■■□□□ 1.29
CCDC43-201ENST00000315286 CHD1LQ86WJ1 897 aa23.09■■□□□ 1.29
CCDC43-201ENST00000315286 LNPKQ9C0E8 428 aa23.09■■□□□ 1.29
CCDC43-201ENST00000315286 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms