RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 IGSF1Q8N6C5 1336 aa15.72■□□□□ 0.11
RNF4-201ENST00000314289 HSPA2P54652 639 aa15.72■□□□□ 0.11
RNF4-201ENST00000314289 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
RNF4-201ENST00000314289 LRRC59Q96AG4 307 aaKnown RBP15.71■□□□□ 0.11
RNF4-201ENST00000314289 ARHGEF10O15013 1369 aa15.71■□□□□ 0.11
RNF4-201ENST00000314289 AAMPQ13685 434 aa15.71■□□□□ 0.11
RNF4-201ENST00000314289 ZBTB7BO15156 539 aaPredicted RBP15.71■□□□□ 0.1
RNF4-201ENST00000314289 ADGRL3Q9HAR2 1447 aa15.7■□□□□ 0.1
RNF4-201ENST00000314289 RGPD1P0DJD0 1748 aa15.7■□□□□ 0.1
RNF4-201ENST00000314289 ZNF428Q96B54 188 aa15.7■□□□□ 0.1
RNF4-201ENST00000314289 ZNF142P52746 1687 aaPredicted RBP15.7■□□□□ 0.1
RNF4-201ENST00000314289 LNPKQ9C0E8 428 aa15.69■□□□□ 0.1
RNF4-201ENST00000314289 NBPF6Q5VWK0 638 aa15.69■□□□□ 0.1
RNF4-201ENST00000314289 NBPF4Q96M43 638 aa15.69■□□□□ 0.1
RNF4-201ENST00000314289 CRB1P82279 1406 aa15.68■□□□□ 0.1
RNF4-201ENST00000314289 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
RNF4-201ENST00000314289 KDRP35968 1356 aa15.68■□□□□ 0.1
RNF4-201ENST00000314289 MARF1Q9Y4F3 1742 aaKnown RBP15.68■□□□□ 0.1
RNF4-201ENST00000314289 HDAC1Q13547 482 aaPredicted RBP15.68■□□□□ 0.1
RNF4-201ENST00000314289 USP35Q9P2H5 1018 aa15.68■□□□□ 0.1
RNF4-201ENST00000314289 GAS2L2Q8NHY3 880 aa15.67■□□□□ 0.1
RNF4-201ENST00000314289 BRPF1P55201 1214 aaPredicted RBP15.67■□□□□ 0.1
RNF4-201ENST00000314289 G2E3Q7L622 706 aa15.67■□□□□ 0.1
RNF4-201ENST00000314289 IL17REQ8NFR9 667 aa15.66■□□□□ 0.1
RNF4-201ENST00000314289 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.66■□□□□ 0.1
RNF4-201ENST00000314289 GNAT3A8MTJ3 354 aa15.66■□□□□ 0.1
RNF4-201ENST00000314289 F6X3S4 739 aa15.66■□□□□ 0.1
RNF4-201ENST00000314289 ABCC4O15439 1325 aa15.66■□□□□ 0.1
RNF4-201ENST00000314289 GCP02774 474 aa15.66■□□□□ 0.1
RNF4-201ENST00000314289 SLC4A10Q6U841 1118 aa15.66■□□□□ 0.1
RNF4-201ENST00000314289 SIRT2Q8IXJ6 389 aa15.66■□□□□ 0.1
RNF4-201ENST00000314289 ARHGAP45Q92619 1136 aa15.66■□□□□ 0.1
RNF4-201ENST00000314289 ZC3H6P61129 1189 aaKnown RBP15.65■□□□□ 0.1
RNF4-201ENST00000314289 IP6K1Q92551 441 aa15.65■□□□□ 0.1
RNF4-201ENST00000314289 ANKRD45Q5TZF3 282 aa15.64■□□□□ 0.09
RNF4-201ENST00000314289 KRT28Q7Z3Y7 464 aa15.64■□□□□ 0.09
RNF4-201ENST00000314289 API5Q9BZZ5 524 aaKnown RBP15.64■□□□□ 0.09
RNF4-201ENST00000314289 SMC5Q8IY18 1101 aa15.64■□□□□ 0.09
RNF4-201ENST00000314289 USP19O94966 1318 aa15.63■□□□□ 0.09
RNF4-201ENST00000314289 DDRGK1Q96HY6 314 aa15.63■□□□□ 0.09
RNF4-201ENST00000314289 LGR6Q9HBX8 967 aa15.63■□□□□ 0.09
RNF4-201ENST00000314289 APBB1O00213 710 aa15.63■□□□□ 0.09
RNF4-201ENST00000314289 DAXXQ9UER7 740 aaPredicted RBP15.63■□□□□ 0.09
RNF4-201ENST00000314289 AXIN2Q9Y2T1 843 aa15.63■□□□□ 0.09
RNF4-201ENST00000314289 LTN1O94822 1766 aa15.63■□□□□ 0.09
RNF4-201ENST00000314289 BRPF3Q9ULD4 1205 aa15.62■□□□□ 0.09
RNF4-201ENST00000314289 NWD1Q149M9 1564 aa15.62■□□□□ 0.09
RNF4-201ENST00000314289 CABLES1Q8TDN4 633 aa15.62■□□□□ 0.09
RNF4-201ENST00000314289 C19orf44Q9H6X5 657 aa15.62■□□□□ 0.09
RNF4-201ENST00000314289 KCNH5Q8NCM2 988 aa15.61■□□□□ 0.09
RNF4-201ENST00000314289 MEIS3Q99687 375 aa15.61■□□□□ 0.09
RNF4-201ENST00000314289 MPRIPQ6WCQ1 1025 aa15.6■□□□□ 0.09
RNF4-201ENST00000314289 CHD1LQ86WJ1 897 aa15.6■□□□□ 0.09
RNF4-201ENST00000314289 TMEM94Q12767 1356 aa15.6■□□□□ 0.09
RNF4-201ENST00000314289 ATF3P18847 181 aa15.6■□□□□ 0.09
RNF4-201ENST00000314289 NUCB1Q02818 461 aa15.6■□□□□ 0.09
RNF4-201ENST00000314289 MSH6P52701 1360 aa15.6■□□□□ 0.09
RNF4-201ENST00000314289 MAP3K5Q99683 1374 aa15.6■□□□□ 0.09
RNF4-201ENST00000314289 KIAA0232Q92628 1395 aa15.59■□□□□ 0.09
RNF4-201ENST00000314289 NFKBIBQ15653 356 aa15.59■□□□□ 0.09
RNF4-201ENST00000314289 MFAP1P55081 439 aaKnown RBP15.59■□□□□ 0.09
RNF4-201ENST00000314289 RGPD2P0DJD1 1756 aa15.59■□□□□ 0.09
RNF4-201ENST00000314289 KCNQ3O43525 872 aa15.59■□□□□ 0.09
RNF4-201ENST00000314289 ARHGEF25Q86VW2 580 aa15.59■□□□□ 0.09
RNF4-201ENST00000314289 ANKRD24Q8TF21 1146 aa15.59■□□□□ 0.09
RNF4-201ENST00000314289 RGS12O14924 1447 aa15.59■□□□□ 0.09
RNF4-201ENST00000314289 NFAT5O94916 1531 aa15.58■□□□□ 0.09
RNF4-201ENST00000314289 EIF2S2P20042 333 aaKnown RBP15.58■□□□□ 0.08
RNF4-201ENST00000314289 GSE1Q14687 1217 aa15.58■□□□□ 0.08
RNF4-201ENST00000314289 TAF7Q15545 349 aaPredicted RBP15.57■□□□□ 0.08
RNF4-201ENST00000314289 ZNF530Q6P9A1 599 aaPredicted RBP15.57■□□□□ 0.08
RNF4-201ENST00000314289 C1orf167Q5SNV9 1468 aa15.57■□□□□ 0.08
RNF4-201ENST00000314289 FKBP5Q13451 457 aaPredicted RBP15.57■□□□□ 0.08
RNF4-201ENST00000314289 INTS3Q68E01 1043 aaKnown RBP15.57■□□□□ 0.08
RNF4-201ENST00000314289 STK31Q9BXU1 1019 aa15.57■□□□□ 0.08
RNF4-201ENST00000314289 KIF24Q5T7B8 1368 aa15.57■□□□□ 0.08
RNF4-201ENST00000314289 HAP1P54257 671 aaPredicted RBP15.56■□□□□ 0.08
RNF4-201ENST00000314289 ANXA1P04083 346 aa15.56■□□□□ 0.08
RNF4-201ENST00000314289 CHRNA2Q15822 529 aa15.55■□□□□ 0.08
RNF4-201ENST00000314289 C16orf71Q8IYS4 520 aaPredicted RBP15.55■□□□□ 0.08
RNF4-201ENST00000314289 RTL1A6NKG5 1358 aa15.55■□□□□ 0.08
RNF4-201ENST00000314289 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
RNF4-201ENST00000314289 PHAXQ9H814 394 aaKnown RBP15.54■□□□□ 0.08
RNF4-201ENST00000314289 HTATSF1O43719 755 aaKnown RBP15.54■□□□□ 0.08
RNF4-201ENST00000314289 SMARCA5O60264 1052 aaPredicted RBP15.54■□□□□ 0.08
RNF4-201ENST00000314289 FLIIQ13045 1269 aa15.54■□□□□ 0.08
RNF4-201ENST00000314289 PTPRCP08575 1304 aa15.54■□□□□ 0.08
RNF4-201ENST00000314289 UPF2Q9HAU5 1272 aaKnown RBP15.54■□□□□ 0.08
RNF4-201ENST00000314289 VIRMAQ69YN4 1812 aaKnown RBP15.53■□□□□ 0.08
RNF4-201ENST00000314289 HDGFL1Q5TGJ6 251 aa15.53■□□□□ 0.08
RNF4-201ENST00000314289 GCC1Q96CN9 775 aa15.53■□□□□ 0.08
RNF4-201ENST00000314289 TEFQ10587 303 aa15.53■□□□□ 0.08
RNF4-201ENST00000314289 CCDC30Q5VVM6 783 aa15.53■□□□□ 0.08
RNF4-201ENST00000314289 OTUD7AQ8TE49 926 aaPredicted RBP15.53■□□□□ 0.08
RNF4-201ENST00000314289 NLRP2Q9NX02 1062 aa15.53■□□□□ 0.08
RNF4-201ENST00000314289 CEP85Q6P2H3 762 aa15.52■□□□□ 0.08
RNF4-201ENST00000314289 SPRYD3Q8NCJ5 442 aa15.52■□□□□ 0.08
RNF4-201ENST00000314289 STRCP1A6NGW2 1772 aa15.51■□□□□ 0.07
RNF4-201ENST00000314289 PXDNQ92626 1479 aa15.51■□□□□ 0.07
RNF4-201ENST00000314289 BTBD11A6QL63 1104 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms