RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 RNF20Q5VTR2 975 aa16.65■□□□□ 0.26
DDX54-202ENST00000314045 IP6K1Q92551 441 aa16.65■□□□□ 0.26
DDX54-202ENST00000314045 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
DDX54-202ENST00000314045 FSD1Q9BTV5 496 aa16.65■□□□□ 0.26
DDX54-202ENST00000314045 RSPH6AQ9H0K4 717 aa16.65■□□□□ 0.26
DDX54-202ENST00000314045 IL1RAPL2Q9NP60 686 aa16.64■□□□□ 0.25
DDX54-202ENST00000314045 ARHGAP31Q2M1Z3 1444 aa16.64■□□□□ 0.25
DDX54-202ENST00000314045 PTMSP20962 102 aa16.64■□□□□ 0.25
DDX54-202ENST00000314045 C8orf58Q8NAV2 365 aa16.64■□□□□ 0.25
DDX54-202ENST00000314045 DNAAF4Q8WXU2 420 aa16.64■□□□□ 0.25
DDX54-202ENST00000314045 UBAP1LF5GYI3 381 aa16.64■□□□□ 0.25
DDX54-202ENST00000314045 ABCA9Q8IUA7 1624 aa16.64■□□□□ 0.25
DDX54-202ENST00000314045 KIF3AQ9Y496 699 aa16.63■□□□□ 0.25
DDX54-202ENST00000314045 IL13P35225 146 aa16.63■□□□□ 0.25
DDX54-202ENST00000314045 PTPRCP08575 1304 aa16.63■□□□□ 0.25
DDX54-202ENST00000314045 SKAP1Q86WV1 359 aa16.63■□□□□ 0.25
DDX54-202ENST00000314045 WASHC4Q2M389 1173 aa16.62■□□□□ 0.25
DDX54-202ENST00000314045 HYPKQ9NX55 129 aa16.62■□□□□ 0.25
DDX54-202ENST00000314045 PLEKHG1Q9ULL1 1385 aa16.62■□□□□ 0.25
DDX54-202ENST00000314045 TET3O43151 1660 aa16.62■□□□□ 0.25
DDX54-202ENST00000314045 HTATSF1O43719 755 aaKnown RBP16.62■□□□□ 0.25
DDX54-202ENST00000314045 ANXA1P04083 346 aa16.62■□□□□ 0.25
DDX54-202ENST00000314045 SPINK5Q9NQ38 1064 aaPredicted RBP16.62■□□□□ 0.25
DDX54-202ENST00000314045 CNNM1Q9NRU3 951 aa16.62■□□□□ 0.25
DDX54-202ENST00000314045 IQGAP3Q86VI3 1631 aa16.62■□□□□ 0.25
DDX54-202ENST00000314045 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
DDX54-202ENST00000314045 AKAP4Q5JQC9 854 aa16.61■□□□□ 0.25
DDX54-202ENST00000314045 ZCRB1Q8TBF4 217 aaKnown RBP16.61■□□□□ 0.25
DDX54-202ENST00000314045 DNAJC2Q99543 621 aaKnown RBP16.61■□□□□ 0.25
DDX54-202ENST00000314045 SHROOM2Q13796 1616 aa16.61■□□□□ 0.25
DDX54-202ENST00000314045 MYD88Q99836 296 aa16.6■□□□□ 0.25
DDX54-202ENST00000314045 LRRIQ1Q96JM4 1722 aa16.6■□□□□ 0.25
DDX54-202ENST00000314045 PI4KAP2A4QPH2 592 aa16.6■□□□□ 0.25
DDX54-202ENST00000314045 PI4KAP1Q8N8J0 262 aa16.6■□□□□ 0.25
DDX54-202ENST00000314045 ARHGAP45Q92619 1136 aa16.59■□□□□ 0.25
DDX54-202ENST00000314045 TSPYL6Q8N831 410 aa16.59■□□□□ 0.25
DDX54-202ENST00000314045 TRDNQ13061 729 aa16.59■□□□□ 0.25
DDX54-202ENST00000314045 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
DDX54-202ENST00000314045 FAM184AQ8NB25 1140 aa16.59■□□□□ 0.25
DDX54-202ENST00000314045 CCDC85AQ96PX6 553 aaPredicted RBP16.59■□□□□ 0.25
DDX54-202ENST00000314045 NOL10Q9BSC4 688 aaKnown RBP16.59■□□□□ 0.25
DDX54-202ENST00000314045 KDM5CP41229 1560 aa16.58■□□□□ 0.25
DDX54-202ENST00000314045 VAMP4O75379 141 aa16.58■□□□□ 0.25
DDX54-202ENST00000314045 AACSQ86V21 672 aa16.58■□□□□ 0.25
DDX54-202ENST00000314045 CEP126Q9P2H0 1117 aa16.58■□□□□ 0.25
DDX54-202ENST00000314045 LRRFIP2Q9Y608 721 aaKnown RBP16.58■□□□□ 0.25
DDX54-202ENST00000314045 KAT6BQ8WYB5 2073 aa16.58■□□□□ 0.25
DDX54-202ENST00000314045 SBNO1A3KN83 1393 aa16.58■□□□□ 0.24
DDX54-202ENST00000314045 KRT24Q2M2I5 525 aa16.58■□□□□ 0.24
DDX54-202ENST00000314045 SNRPA1P09661 255 aaKnown RBP16.58■□□□□ 0.24
DDX54-202ENST00000314045 FOXD4L6Q3SYB3 417 aaPredicted RBP16.57■□□□□ 0.24
DDX54-202ENST00000314045 FOXD4L3Q6VB84 417 aaPredicted RBP16.57■□□□□ 0.24
DDX54-202ENST00000314045 CHMP4CQ96CF2 233 aa16.57■□□□□ 0.24
DDX54-202ENST00000314045 KIF1BO60333 1816 aa16.57■□□□□ 0.24
DDX54-202ENST00000314045 ROBO2Q9HCK4 1378 aa16.57■□□□□ 0.24
DDX54-202ENST00000314045 DEKP35659 375 aaKnown RBP16.57■□□□□ 0.24
DDX54-202ENST00000314045 L1TD1Q5T7N2 865 aaKnown RBP16.57■□□□□ 0.24
DDX54-202ENST00000314045 MPHOSPH8Q99549 860 aa16.56■□□□□ 0.24
DDX54-202ENST00000314045 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
DDX54-202ENST00000314045 NLRP1Q9C000 1473 aa16.56■□□□□ 0.24
DDX54-202ENST00000314045 CPLX2Q6PUV4 134 aaKnown RBP16.56■□□□□ 0.24
DDX54-202ENST00000314045 DDX17Q92841 729 aaKnown RBP16.56■□□□□ 0.24
DDX54-202ENST00000314045 KIF1BPQ96EK5 621 aa16.56■□□□□ 0.24
DDX54-202ENST00000314045 CHMP5Q9NZZ3 219 aa16.56■□□□□ 0.24
DDX54-202ENST00000314045 CCDC158Q5M9N0 1113 aa16.56■□□□□ 0.24
DDX54-202ENST00000314045 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
DDX54-202ENST00000314045 H3BQV1 296 aa16.56■□□□□ 0.24
DDX54-202ENST00000314045 SMARCA5O60264 1052 aaPredicted RBP16.56■□□□□ 0.24
DDX54-202ENST00000314045 IFFO2Q5TF58 517 aa16.56■□□□□ 0.24
DDX54-202ENST00000314045 SLAIN2Q9P270 581 aa16.56■□□□□ 0.24
DDX54-202ENST00000314045 UNC13BO14795 1591 aa16.55■□□□□ 0.24
DDX54-202ENST00000314045 SYNE3Q6ZMZ3 975 aa16.55■□□□□ 0.24
DDX54-202ENST00000314045 MAP3K2Q9Y2U5 619 aa16.55■□□□□ 0.24
DDX54-202ENST00000314045 PIK3R4Q99570 1358 aa16.55■□□□□ 0.24
DDX54-202ENST00000314045 HIP1O00291 1037 aa16.55■□□□□ 0.24
DDX54-202ENST00000314045 MRPL50Q8N5N7 158 aaKnown RBP16.55■□□□□ 0.24
DDX54-202ENST00000314045 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
DDX54-202ENST00000314045 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
DDX54-202ENST00000314045 MAP4K4O95819 1239 aaPredicted RBP16.55■□□□□ 0.24
DDX54-202ENST00000314045 A0A087WZG4 1122 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 IGHDP01880 384 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 NEK4P51957 841 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 CSPP1Q1MSJ5 1256 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 CHPF2Q9P2E5 772 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 TNNQ9UQP3 1299 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 BICDL1Q6ZP65 573 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 NUTM1Q86Y26 1132 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 NFATC2IPQ8NCF5 419 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 PCDHB15Q9Y5E8 787 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 IL2RBP14784 551 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 FBXW7Q969H0 707 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 TEX13AQ9BXU3 409 aaPredicted RBP16.54■□□□□ 0.24
DDX54-202ENST00000314045 TRIM35Q9UPQ4 493 aa16.54■□□□□ 0.24
DDX54-202ENST00000314045 ATP6V1DQ9Y5K8 247 aa16.53■□□□□ 0.24
DDX54-202ENST00000314045 LMTK3Q96Q04 1460 aa16.53■□□□□ 0.24
DDX54-202ENST00000314045 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
DDX54-202ENST00000314045 RALYLQ86SE5 291 aaKnown RBP16.53■□□□□ 0.24
DDX54-202ENST00000314045 DDX11L8A8MPP1 907 aa16.52■□□□□ 0.24
DDX54-202ENST00000314045 TULP1O00294 542 aaPredicted RBP16.52■□□□□ 0.24
DDX54-202ENST00000314045 CPLX1O14810 134 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms