RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 PZPP20742 1482 aa20.53■□□□□ 0.88
GABRB3-202ENST00000311550 KDM5BQ9UGL1 1544 aa20.53■□□□□ 0.88
GABRB3-202ENST00000311550 BMP2KLQ5H9B9 411 aa20.53■□□□□ 0.88
GABRB3-202ENST00000311550 RLBP1P12271 317 aa20.52■□□□□ 0.88
GABRB3-202ENST00000311550 TNMDQ9H2S6 317 aa20.52■□□□□ 0.88
GABRB3-202ENST00000311550 DHX16O60231 1041 aaKnown RBP20.52■□□□□ 0.88
GABRB3-202ENST00000311550 CABP4P57796 275 aa20.51■□□□□ 0.87
GABRB3-202ENST00000311550 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
GABRB3-202ENST00000311550 STRN4Q9NRL3 753 aa20.51■□□□□ 0.87
GABRB3-202ENST00000311550 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
GABRB3-202ENST00000311550 SMC2O95347 1197 aa20.51■□□□□ 0.87
GABRB3-202ENST00000311550 TSHZ3Q63HK5 1081 aa20.51■□□□□ 0.87
GABRB3-202ENST00000311550 STK38Q15208 465 aa20.51■□□□□ 0.87
GABRB3-202ENST00000311550 ANKRD1Q15327 319 aa20.51■□□□□ 0.87
GABRB3-202ENST00000311550 PDILTQ8N807 584 aa20.51■□□□□ 0.87
GABRB3-202ENST00000311550 CARD14Q9BXL6 1004 aa20.51■□□□□ 0.87
GABRB3-202ENST00000311550 ANKRD20A12PQ8NF67 263 aa20.51■□□□□ 0.87
GABRB3-202ENST00000311550 NOL10Q9BSC4 688 aaKnown RBP20.51■□□□□ 0.87
GABRB3-202ENST00000311550 FERMT3Q86UX7 667 aa20.5■□□□□ 0.87
GABRB3-202ENST00000311550 AMOTL1Q8IY63 956 aa20.5■□□□□ 0.87
GABRB3-202ENST00000311550 KIF1BPQ96EK5 621 aa20.5■□□□□ 0.87
GABRB3-202ENST00000311550 TTC39AQ5SRH9 613 aa20.5■□□□□ 0.87
GABRB3-202ENST00000311550 OLFM4Q6UX06 510 aa20.5■□□□□ 0.87
GABRB3-202ENST00000311550 NUP160Q12769 1436 aa20.5■□□□□ 0.87
GABRB3-202ENST00000311550 RRP12Q5JTH9 1297 aaKnown RBP20.49■□□□□ 0.87
GABRB3-202ENST00000311550 MNS1Q8NEH6 495 aa20.49■□□□□ 0.87
GABRB3-202ENST00000311550 TBC1D2BQ9UPU7 963 aa20.49■□□□□ 0.87
GABRB3-202ENST00000311550 ZC3H6P61129 1189 aaKnown RBP20.49■□□□□ 0.87
GABRB3-202ENST00000311550 CCDC83Q8IWF9 413 aa20.49■□□□□ 0.87
GABRB3-202ENST00000311550 HDAC1Q13547 482 aaPredicted RBP20.49■□□□□ 0.87
GABRB3-202ENST00000311550 CCDC158Q5M9N0 1113 aa20.49■□□□□ 0.87
GABRB3-202ENST00000311550 PRPF40BQ6NWY9 871 aaKnown RBP20.49■□□□□ 0.87
GABRB3-202ENST00000311550 LARP6Q9BRS8 491 aaKnown RBP20.49■□□□□ 0.87
GABRB3-202ENST00000311550 MTMR7Q9Y216 660 aa20.49■□□□□ 0.87
GABRB3-202ENST00000311550 TAF7Q15545 349 aaPredicted RBP20.48■□□□□ 0.87
GABRB3-202ENST00000311550 ZNF396Q96N95 335 aaPredicted RBP20.48■□□□□ 0.87
GABRB3-202ENST00000311550 DUOX2Q9NRD8 1548 aa20.48■□□□□ 0.87
GABRB3-202ENST00000311550 ANKRD36BQ8N2N9 1353 aa20.48■□□□□ 0.87
GABRB3-202ENST00000311550 KIAA0556O60303 1618 aa20.48■□□□□ 0.87
GABRB3-202ENST00000311550 ME1P48163 572 aa20.48■□□□□ 0.87
GABRB3-202ENST00000311550 PLCH2O75038 1416 aa20.48■□□□□ 0.87
GABRB3-202ENST00000311550 SPATA32Q96LK8 384 aa20.48■□□□□ 0.87
GABRB3-202ENST00000311550 IL16Q14005 1332 aa20.48■□□□□ 0.87
GABRB3-202ENST00000311550 IPO7O95373 1038 aaKnown RBP20.48■□□□□ 0.87
GABRB3-202ENST00000311550 FKBP4Q02790 459 aaKnown RBP eCLIP20.48■□□□□ 0.87
GABRB3-202ENST00000311550 NUCB1Q02818 461 aa20.48■□□□□ 0.87
GABRB3-202ENST00000311550 STK11IPQ8N1F8 1099 aa20.47■□□□□ 0.87
GABRB3-202ENST00000311550 CNNM1Q9NRU3 951 aa20.47■□□□□ 0.87
GABRB3-202ENST00000311550 KIF6Q6ZMV9 814 aa20.47■□□□□ 0.87
GABRB3-202ENST00000311550 TRAPPC8Q9Y2L5 1435 aa20.47■□□□□ 0.87
GABRB3-202ENST00000311550 FLIIQ13045 1269 aa20.46■□□□□ 0.87
GABRB3-202ENST00000311550 ZSCAN31Q96LW9 406 aaPredicted RBP20.46■□□□□ 0.87
GABRB3-202ENST00000311550 DDX11Q96FC9 970 aa20.46■□□□□ 0.87
GABRB3-202ENST00000311550 RBM33Q96EV2 1170 aaKnown RBP20.46■□□□□ 0.87
GABRB3-202ENST00000311550 SPG7Q9UQ90 795 aa20.46■□□□□ 0.87
GABRB3-202ENST00000311550 GLRX3O76003 335 aaKnown RBP20.46■□□□□ 0.87
GABRB3-202ENST00000311550 SEC24BO95487 1268 aa20.45■□□□□ 0.86
GABRB3-202ENST00000311550 ZSCAN30Q86W11 494 aa20.45■□□□□ 0.86
GABRB3-202ENST00000311550 CCDC85AQ96PX6 553 aaPredicted RBP20.45■□□□□ 0.86
GABRB3-202ENST00000311550 BOLA2Q9H3K6 86 aa20.45■□□□□ 0.86
GABRB3-202ENST00000311550 TEX14Q8IWB6 1497 aa20.45■□□□□ 0.86
GABRB3-202ENST00000311550 GDPD2Q9HCC8 539 aa20.44■□□□□ 0.86
GABRB3-202ENST00000311550 TOM1L2Q6ZVM7 507 aa20.44■□□□□ 0.86
GABRB3-202ENST00000311550 POLR3AO14802 1390 aaPredicted RBP20.44■□□□□ 0.86
GABRB3-202ENST00000311550 NUP62CLQ9H1M0 184 aa20.44■□□□□ 0.86
GABRB3-202ENST00000311550 RAB11FIP3O75154 756 aa20.44■□□□□ 0.86
GABRB3-202ENST00000311550 GPS2Q13227 327 aa20.44■□□□□ 0.86
GABRB3-202ENST00000311550 TTC22Q5TAA0 569 aa20.44■□□□□ 0.86
GABRB3-202ENST00000311550 MPRIPQ6WCQ1 1025 aa20.44■□□□□ 0.86
GABRB3-202ENST00000311550 CCDC47Q96A33 483 aaKnown RBP20.44■□□□□ 0.86
GABRB3-202ENST00000311550 MAP7D2Q96T17 732 aa20.44■□□□□ 0.86
GABRB3-202ENST00000311550 HMGN5P82970 282 aaKnown RBP20.44■□□□□ 0.86
GABRB3-202ENST00000311550 CAMK4Q16566 473 aa20.44■□□□□ 0.86
GABRB3-202ENST00000311550 PTPRCP08575 1304 aa20.43■□□□□ 0.86
GABRB3-202ENST00000311550 UQCRHLA0A096LP55 91 aa20.43■□□□□ 0.86
GABRB3-202ENST00000311550 UQCRHP07919 91 aa20.43■□□□□ 0.86
GABRB3-202ENST00000311550 SART3Q15020 963 aaKnown RBP20.43■□□□□ 0.86
GABRB3-202ENST00000311550 ADAMTS12P58397 1594 aa20.43■□□□□ 0.86
GABRB3-202ENST00000311550 ANKLE2Q86XL3 938 aa20.43■□□□□ 0.86
GABRB3-202ENST00000311550 PPP6R1Q9UPN7 881 aa20.42■□□□□ 0.86
GABRB3-202ENST00000311550 AMOTL2Q9Y2J4 779 aa20.42■□□□□ 0.86
GABRB3-202ENST00000311550 CCDC8Q9H0W5 538 aaPredicted RBP20.42■□□□□ 0.86
GABRB3-202ENST00000311550 MEIS3Q99687 375 aa20.42■□□□□ 0.86
GABRB3-202ENST00000311550 C8orf58Q8NAV2 365 aa20.42■□□□□ 0.86
GABRB3-202ENST00000311550 ARHGEF12Q9NZN5 1544 aa20.42■□□□□ 0.86
GABRB3-202ENST00000311550 BAG4O95429 457 aaKnown RBP20.42■□□□□ 0.86
GABRB3-202ENST00000311550 CCDC57Q2TAC2 916 aa20.41■□□□□ 0.86
GABRB3-202ENST00000311550 DNMT1P26358 1616 aaKnown RBP20.41■□□□□ 0.86
GABRB3-202ENST00000311550 MTERF4Q7Z6M4 381 aaKnown RBP20.41■□□□□ 0.86
GABRB3-202ENST00000311550 TTLL5Q6EMB2 1281 aa20.41■□□□□ 0.86
GABRB3-202ENST00000311550 DNAAF4Q8WXU2 420 aa20.41■□□□□ 0.86
GABRB3-202ENST00000311550 CEBPAP49715 358 aaPredicted RBP20.41■□□□□ 0.86
GABRB3-202ENST00000311550 XBP1P17861 261 aa20.4■□□□□ 0.86
GABRB3-202ENST00000311550 ZRANB1Q9UGI0 708 aa20.4■□□□□ 0.86
GABRB3-202ENST00000311550 HSP90AB2PQ58FF8 381 aa20.4■□□□□ 0.86
GABRB3-202ENST00000311550 BRMS1Q9HCU9 246 aa20.4■□□□□ 0.86
GABRB3-202ENST00000311550 PIK3C2GO75747 1445 aa20.4■□□□□ 0.86
GABRB3-202ENST00000311550 ARGLU1Q9NWB6 273 aaPredicted RBP20.4■□□□□ 0.86
GABRB3-202ENST00000311550 COL17A1Q9UMD9 1497 aaPredicted RBP20.39■□□□□ 0.86
GABRB3-202ENST00000311550 DENND4BO75064 1496 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms