RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 TRMT2AQ8IZ69 625 aaKnown RBP13.91□□□□□ -0.18
CASP3-201ENST00000308394 LRRC59Q96AG4 307 aaKnown RBP13.91□□□□□ -0.18
CASP3-201ENST00000308394 NBPF4Q96M43 638 aa13.91□□□□□ -0.18
CASP3-201ENST00000308394 RGPD1P0DJD0 1748 aa13.91□□□□□ -0.18
CASP3-201ENST00000308394 ROBO1Q9Y6N7 1651 aa13.91□□□□□ -0.18
CASP3-201ENST00000308394 NHSL1Q5SYE7 1610 aa13.9□□□□□ -0.18
CASP3-201ENST00000308394 KDRP35968 1356 aa13.9□□□□□ -0.18
CASP3-201ENST00000308394 KIAA0232Q92628 1395 aa13.9□□□□□ -0.18
CASP3-201ENST00000308394 PHRF1Q9P1Y6 1649 aaKnown RBP13.89□□□□□ -0.19
CASP3-201ENST00000308394 LMOD3Q0VAK6 560 aa13.89□□□□□ -0.19
CASP3-201ENST00000308394 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
CASP3-201ENST00000308394 THUMPD2Q9BTF0 503 aaKnown RBP13.88□□□□□ -0.19
CASP3-201ENST00000308394 PRDM11Q9NQV5 511 aa13.88□□□□□ -0.19
CASP3-201ENST00000308394 FAM83GA6ND36 823 aa13.88□□□□□ -0.19
CASP3-201ENST00000308394 UBAP1LF5GYI3 381 aa13.88□□□□□ -0.19
CASP3-201ENST00000308394 MTHFSDQ2M296 383 aaKnown RBP13.88□□□□□ -0.19
CASP3-201ENST00000308394 LAS1LQ9Y4W2 734 aaKnown RBP13.88□□□□□ -0.19
CASP3-201ENST00000308394 CSB-PGBD3P0DP91 1061 aa13.87□□□□□ -0.19
CASP3-201ENST00000308394 DCTN1Q14203 1278 aa13.87□□□□□ -0.19
CASP3-201ENST00000308394 ERBB3P21860 1342 aa13.87□□□□□ -0.19
CASP3-201ENST00000308394 TSR2Q969E8 191 aaKnown RBP13.87□□□□□ -0.19
CASP3-201ENST00000308394 CPDO75976 1380 aa13.86□□□□□ -0.19
CASP3-201ENST00000308394 CALD1Q05682 793 aaKnown RBP13.86□□□□□ -0.19
CASP3-201ENST00000308394 GAS2L2Q8NHY3 880 aa13.86□□□□□ -0.19
CASP3-201ENST00000308394 NLRP2Q9NX02 1062 aa13.86□□□□□ -0.19
CASP3-201ENST00000308394 IL16Q14005 1332 aa13.86□□□□□ -0.19
CASP3-201ENST00000308394 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
CASP3-201ENST00000308394 RTF1Q92541 710 aaKnown RBP13.85□□□□□ -0.19
CASP3-201ENST00000308394 MCM10Q7L590 875 aa13.85□□□□□ -0.19
CASP3-201ENST00000308394 CRYBG1Q9Y4K1 1723 aa13.85□□□□□ -0.19
CASP3-201ENST00000308394 FANCIQ9NVI1 1328 aa13.84□□□□□ -0.19
CASP3-201ENST00000308394 RGPD5Q99666 1765 aa13.84□□□□□ -0.19
CASP3-201ENST00000308394 AHDC1Q5TGY3 1603 aaPredicted RBP13.84□□□□□ -0.19
CASP3-201ENST00000308394 RRP1P56182 461 aaKnown RBP13.84□□□□□ -0.19
CASP3-201ENST00000308394 BRPF3Q9ULD4 1205 aa13.83□□□□□ -0.2
CASP3-201ENST00000308394 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
CASP3-201ENST00000308394 RGPD2P0DJD1 1756 aa13.83□□□□□ -0.2
CASP3-201ENST00000308394 DLG5Q8TDM6 1919 aa13.82□□□□□ -0.2
CASP3-201ENST00000308394 GNAI1P63096 354 aa13.82□□□□□ -0.2
CASP3-201ENST00000308394 EXOSC9Q06265 439 aaKnown RBP13.82□□□□□ -0.2
CASP3-201ENST00000308394 GNAT3A8MTJ3 354 aa13.81□□□□□ -0.2
CASP3-201ENST00000308394 PLIN1O60240 522 aa13.81□□□□□ -0.2
CASP3-201ENST00000308394 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
CASP3-201ENST00000308394 COL18A1P39060 1754 aa13.81□□□□□ -0.2
CASP3-201ENST00000308394 EVA1CP58658 441 aa13.81□□□□□ -0.2
CASP3-201ENST00000308394 PLEKHO1Q53GL0 409 aaPredicted RBP13.81□□□□□ -0.2
CASP3-201ENST00000308394 CERKQ8TCT0 537 aa13.81□□□□□ -0.2
CASP3-201ENST00000308394 RAPGEF4Q8WZA2 1011 aa13.81□□□□□ -0.2
CASP3-201ENST00000308394 HMGB1P09429 215 aaKnown RBP13.8□□□□□ -0.2
CASP3-201ENST00000308394 TOM1L2Q6ZVM7 507 aa13.8□□□□□ -0.2
CASP3-201ENST00000308394 STRN4Q9NRL3 753 aa13.8□□□□□ -0.2
CASP3-201ENST00000308394 BCAR3O75815 825 aa13.8□□□□□ -0.2
CASP3-201ENST00000308394 PHLPP1O60346 1717 aa13.8□□□□□ -0.2
CASP3-201ENST00000308394 AMOTQ4VCS5 1084 aa13.79□□□□□ -0.2
CASP3-201ENST00000308394 MBIPQ9NS73 344 aa13.79□□□□□ -0.2
CASP3-201ENST00000308394 NAP1L2Q9ULW6 460 aaPredicted RBP13.79□□□□□ -0.2
CASP3-201ENST00000308394 ABCC6O95255 1503 aa13.79□□□□□ -0.2
CASP3-201ENST00000308394 ABCA3Q99758 1704 aa13.79□□□□□ -0.2
CASP3-201ENST00000308394 HTATSF1O43719 755 aaKnown RBP13.78□□□□□ -0.2
CASP3-201ENST00000308394 ZNF530Q6P9A1 599 aaPredicted RBP13.78□□□□□ -0.2
CASP3-201ENST00000308394 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
CASP3-201ENST00000308394 MAP3K5Q99683 1374 aa13.78□□□□□ -0.2
CASP3-201ENST00000308394 ZNF853P0CG23 659 aa13.78□□□□□ -0.2
CASP3-201ENST00000308394 TATP17735 454 aaPredicted RBP13.78□□□□□ -0.2
CASP3-201ENST00000308394 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
CASP3-201ENST00000308394 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.78□□□□□ -0.2
CASP3-201ENST00000308394 NCAPD2Q15021 1401 aa13.78□□□□□ -0.2
CASP3-201ENST00000308394 WDR17Q8IZU2 1322 aa13.78□□□□□ -0.2
CASP3-201ENST00000308394 NUTM2BA6NNL0 878 aaPredicted RBP13.77□□□□□ -0.2
CASP3-201ENST00000308394 NUTM2EB1AL46 878 aaPredicted RBP13.77□□□□□ -0.2
CASP3-201ENST00000308394 NUTM2AQ8IVF1 878 aaPredicted RBP13.77□□□□□ -0.2
CASP3-201ENST00000308394 BTG4Q9NY30 223 aa13.77□□□□□ -0.2
CASP3-201ENST00000308394 ADAMTS2O95450 1211 aa13.77□□□□□ -0.21
CASP3-201ENST00000308394 RARSP54136 660 aaKnown RBP13.77□□□□□ -0.21
CASP3-201ENST00000308394 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.21
CASP3-201ENST00000308394 BCL2L13Q9BXK5 485 aa13.77□□□□□ -0.21
CASP3-201ENST00000308394 MIS18AQ9NYP9 233 aa13.77□□□□□ -0.21
CASP3-201ENST00000308394 COL16A1Q07092 1604 aaPredicted RBP13.76□□□□□ -0.21
CASP3-201ENST00000308394 COL5A2P05997 1499 aaPredicted RBP13.76□□□□□ -0.21
CASP3-201ENST00000308394 ELL2O00472 640 aaPredicted RBP13.76□□□□□ -0.21
CASP3-201ENST00000308394 CT47B1P0C2W7 299 aaPredicted RBP13.76□□□□□ -0.21
CASP3-201ENST00000308394 AKAP4Q5JQC9 854 aa13.76□□□□□ -0.21
CASP3-201ENST00000308394 LARP1Q6PKG0 1096 aaKnown RBP13.76□□□□□ -0.21
CASP3-201ENST00000308394 IL17REQ8NFR9 667 aa13.76□□□□□ -0.21
CASP3-201ENST00000308394 CANXP27824 592 aaKnown RBP13.76□□□□□ -0.21
CASP3-201ENST00000308394 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
CASP3-201ENST00000308394 CHL1O00533 1208 aa13.75□□□□□ -0.21
CASP3-201ENST00000308394 MPRIPQ6WCQ1 1025 aa13.75□□□□□ -0.21
CASP3-201ENST00000308394 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
CASP3-201ENST00000308394 TSPYL4Q9UJ04 414 aa13.75□□□□□ -0.21
CASP3-201ENST00000308394 CRB1P82279 1406 aa13.74□□□□□ -0.21
CASP3-201ENST00000308394 LMO7Q8WWI1 1683 aa13.74□□□□□ -0.21
CASP3-201ENST00000308394 LGR6Q9HBX8 967 aa13.74□□□□□ -0.21
CASP3-201ENST00000308394 SPG7Q9UQ90 795 aa13.74□□□□□ -0.21
CASP3-201ENST00000308394 ZFP91Q96JP5 570 aaPredicted RBP13.74□□□□□ -0.21
CASP3-201ENST00000308394 COL22A1Q8NFW1 1626 aaPredicted RBP13.74□□□□□ -0.21
CASP3-201ENST00000308394 FAM208AQ9UK61 1670 aaKnown RBP13.73□□□□□ -0.21
CASP3-201ENST00000308394 TSPYL6Q8N831 410 aa13.73□□□□□ -0.21
CASP3-201ENST00000308394 SMC4Q9NTJ3 1288 aa13.73□□□□□ -0.21
CASP3-201ENST00000308394 MEGF6O75095 1541 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms