RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 APLP1P51693 650 aa13.58□□□□□ -0.24
TEFM-201ENST00000306049 SLC27A3Q5K4L6 730 aa13.57□□□□□ -0.24
TEFM-201ENST00000306049 L3MBTL2Q969R5 705 aa13.57□□□□□ -0.24
TEFM-201ENST00000306049 NLRP2Q9NX02 1062 aa13.57□□□□□ -0.24
TEFM-201ENST00000306049 ERBB3P21860 1342 aa13.57□□□□□ -0.24
TEFM-201ENST00000306049 FAM208AQ9UK61 1670 aaKnown RBP13.56□□□□□ -0.24
TEFM-201ENST00000306049 IL2RBP14784 551 aa13.56□□□□□ -0.24
TEFM-201ENST00000306049 ADCY9O60503 1353 aa13.56□□□□□ -0.24
TEFM-201ENST00000306049 ROCK2O75116 1388 aaKnown RBP13.56□□□□□ -0.24
TEFM-201ENST00000306049 USP31Q70CQ4 1352 aa13.56□□□□□ -0.24
TEFM-201ENST00000306049 LY75O60449 1722 aa13.56□□□□□ -0.24
TEFM-201ENST00000306049 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
TEFM-201ENST00000306049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.55□□□□□ -0.24
TEFM-201ENST00000306049 DOT1LQ8TEK3 1739 aa13.55□□□□□ -0.24
TEFM-201ENST00000306049 COL13A1Q5TAT6 717 aaPredicted RBP13.53□□□□□ -0.24
TEFM-201ENST00000306049 NME9Q86XW9 330 aa13.53□□□□□ -0.24
TEFM-201ENST00000306049 DNAJC5GQ8N7S2 189 aa13.53□□□□□ -0.24
TEFM-201ENST00000306049 ANKRD24Q8TF21 1146 aa13.53□□□□□ -0.24
TEFM-201ENST00000306049 CD163L1Q9NR16 1453 aa13.53□□□□□ -0.24
TEFM-201ENST00000306049 KIF3CO14782 793 aa13.52□□□□□ -0.25
TEFM-201ENST00000306049 SBNO2Q9Y2G9 1366 aa13.51□□□□□ -0.25
TEFM-201ENST00000306049 KCNQ4P56696 695 aa13.51□□□□□ -0.25
TEFM-201ENST00000306049 TNS4Q8IZW8 715 aa13.5□□□□□ -0.25
TEFM-201ENST00000306049 CD2APQ9Y5K6 639 aa13.5□□□□□ -0.25
TEFM-201ENST00000306049 PRELPP51888 382 aa13.49□□□□□ -0.25
TEFM-201ENST00000306049 MSL1Q68DK7 614 aa13.49□□□□□ -0.25
TEFM-201ENST00000306049 DDX54Q8TDD1 881 aaKnown RBP13.49□□□□□ -0.25
TEFM-201ENST00000306049 SIN3AQ96ST3 1273 aa13.49□□□□□ -0.25
TEFM-201ENST00000306049 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
TEFM-201ENST00000306049 EDC4Q6P2E9 1401 aaKnown RBP13.48□□□□□ -0.25
TEFM-201ENST00000306049 TOMM70O94826 608 aa13.48□□□□□ -0.25
TEFM-201ENST00000306049 HDGFL2Q7Z4V5 671 aaPredicted RBP13.48□□□□□ -0.25
TEFM-201ENST00000306049 TMC1Q8TDI8 760 aa13.48□□□□□ -0.25
TEFM-201ENST00000306049 SYTL4Q96C24 671 aaPredicted RBP13.48□□□□□ -0.25
TEFM-201ENST00000306049 COL23A1Q86Y22 540 aaPredicted RBP13.47□□□□□ -0.25
TEFM-201ENST00000306049 TAF1LQ8IZX4 1826 aa13.47□□□□□ -0.25
TEFM-201ENST00000306049 NEUROD1Q13562 356 aa13.46□□□□□ -0.25
TEFM-201ENST00000306049 IP6K1Q92551 441 aa13.46□□□□□ -0.25
TEFM-201ENST00000306049 SLC12A5Q9H2X9 1139 aa13.46□□□□□ -0.25
TEFM-201ENST00000306049 WWC3Q9ULE0 1092 aa13.46□□□□□ -0.25
TEFM-201ENST00000306049 ANKRD36BQ8N2N9 1353 aa13.45□□□□□ -0.26
TEFM-201ENST00000306049 WDR90Q96KV7 1748 aa13.45□□□□□ -0.26
TEFM-201ENST00000306049 C5P01031 1676 aa13.45□□□□□ -0.26
TEFM-201ENST00000306049 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
TEFM-201ENST00000306049 LTV1Q96GA3 475 aaPredicted RBP13.45□□□□□ -0.26
TEFM-201ENST00000306049 CCNL1Q9UK58 526 aaPredicted RBP13.45□□□□□ -0.26
TEFM-201ENST00000306049 A0A1W2PP64 1363 aa13.45□□□□□ -0.26
TEFM-201ENST00000306049 NSD2O96028 1365 aa13.45□□□□□ -0.26
TEFM-201ENST00000306049 KLRG1Q96E93 195 aa13.44□□□□□ -0.26
TEFM-201ENST00000306049 IGSF1Q8N6C5 1336 aa13.43□□□□□ -0.26
TEFM-201ENST00000306049 TERF2IPQ9NYB0 399 aa13.43□□□□□ -0.26
TEFM-201ENST00000306049 ITGB4P16144 1822 aa13.43□□□□□ -0.26
TEFM-201ENST00000306049 PCNTO95613 3336 aa13.42□□□□□ -0.26
TEFM-201ENST00000306049 JMYQ8N9B5 988 aa13.42□□□□□ -0.26
TEFM-201ENST00000306049 CARD11Q9BXL7 1154 aa13.42□□□□□ -0.26
TEFM-201ENST00000306049 MEGF6O75095 1541 aa13.42□□□□□ -0.26
TEFM-201ENST00000306049 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
TEFM-201ENST00000306049 FLAD1Q8NFF5 587 aa13.41□□□□□ -0.26
TEFM-201ENST00000306049 ZCRB1Q8TBF4 217 aaKnown RBP13.41□□□□□ -0.26
TEFM-201ENST00000306049 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
TEFM-201ENST00000306049 HOXC9P31274 260 aa13.4□□□□□ -0.26
TEFM-201ENST00000306049 HTRA3P83110 453 aa13.4□□□□□ -0.26
TEFM-201ENST00000306049 C16orf71Q8IYS4 520 aaPredicted RBP13.4□□□□□ -0.26
TEFM-201ENST00000306049 AMPHP49418 695 aa13.39□□□□□ -0.27
TEFM-201ENST00000306049 USP47Q96K76 1375 aa13.39□□□□□ -0.27
TEFM-201ENST00000306049 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
TEFM-201ENST00000306049 FBLN1P23142 703 aa13.38□□□□□ -0.27
TEFM-201ENST00000306049 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
TEFM-201ENST00000306049 DSG3P32926 999 aa13.38□□□□□ -0.27
TEFM-201ENST00000306049 RBM46Q8TBY0 533 aaKnown RBP13.38□□□□□ -0.27
TEFM-201ENST00000306049 COG3Q96JB2 828 aa13.38□□□□□ -0.27
TEFM-201ENST00000306049 PUS7Q96PZ0 661 aaKnown RBP13.38□□□□□ -0.27
TEFM-201ENST00000306049 NMRK2Q9NPI5 230 aa13.38□□□□□ -0.27
TEFM-201ENST00000306049 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
TEFM-201ENST00000306049 KIF20BQ96Q89 1820 aa13.36□□□□□ -0.27
TEFM-201ENST00000306049 C4BP0C0L5 1744 aa13.36□□□□□ -0.27
TEFM-201ENST00000306049 SLC34A2O95436 690 aa13.36□□□□□ -0.27
TEFM-201ENST00000306049 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
TEFM-201ENST00000306049 RTL1A6NKG5 1358 aa13.35□□□□□ -0.27
TEFM-201ENST00000306049 FSTL1Q12841 308 aa13.35□□□□□ -0.27
TEFM-201ENST00000306049 CGNL1Q0VF96 1302 aa13.35□□□□□ -0.27
TEFM-201ENST00000306049 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
TEFM-201ENST00000306049 NBPF6Q5VWK0 638 aa13.34□□□□□ -0.27
TEFM-201ENST00000306049 USHBP1Q8N6Y0 703 aa13.34□□□□□ -0.27
TEFM-201ENST00000306049 NBPF4Q96M43 638 aa13.34□□□□□ -0.27
TEFM-201ENST00000306049 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
TEFM-201ENST00000306049 PKD1L3Q7Z443 1732 aa13.33□□□□□ -0.27
TEFM-201ENST00000306049 RRS1Q15050 365 aaKnown RBP13.33□□□□□ -0.28
TEFM-201ENST00000306049 RAPGEF4Q8WZA2 1011 aa13.33□□□□□ -0.28
TEFM-201ENST00000306049 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
TEFM-201ENST00000306049 SMG6Q86US8 1419 aaKnown RBP13.32□□□□□ -0.28
TEFM-201ENST00000306049 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
TEFM-201ENST00000306049 ARHGAP27Q6ZUM4 889 aa13.32□□□□□ -0.28
TEFM-201ENST00000306049 AK7Q96M32 723 aa13.32□□□□□ -0.28
TEFM-201ENST00000306049 TESK2Q96S53 571 aa13.32□□□□□ -0.28
TEFM-201ENST00000306049 BCS1LQ9Y276 419 aa13.32□□□□□ -0.28
TEFM-201ENST00000306049 PHF14O94880 888 aa13.31□□□□□ -0.28
TEFM-201ENST00000306049 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
TEFM-201ENST00000306049 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
TEFM-201ENST00000306049 PCDH11XQ9BZA7 1347 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms