RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.47■□□□□ 0.71
CHAF1A-201ENST00000301280 FKBP5Q13451 457 aaPredicted RBP19.46■□□□□ 0.71
CHAF1A-201ENST00000301280 ADAMTS13Q76LX8 1427 aa19.46■□□□□ 0.71
CHAF1A-201ENST00000301280 ALDH1L2Q3SY69 923 aa19.46■□□□□ 0.71
CHAF1A-201ENST00000301280 G2E3Q7L622 706 aa19.46■□□□□ 0.71
CHAF1A-201ENST00000301280 EXOC6BQ9Y2D4 811 aa19.45■□□□□ 0.7
CHAF1A-201ENST00000301280 MRPL50Q8N5N7 158 aaKnown RBP19.45■□□□□ 0.7
CHAF1A-201ENST00000301280 MEIS3Q99687 375 aa19.45■□□□□ 0.7
CHAF1A-201ENST00000301280 TTC21BQ7Z4L5 1316 aa19.44■□□□□ 0.7
CHAF1A-201ENST00000301280 SLIT1O75093 1534 aa19.44■□□□□ 0.7
CHAF1A-201ENST00000301280 N4BP2Q86UW6 1770 aaPredicted RBP19.44■□□□□ 0.7
CHAF1A-201ENST00000301280 TBC1D32Q96NH3 1257 aa19.43■□□□□ 0.7
CHAF1A-201ENST00000301280 MAP4K4O95819 1239 aaPredicted RBP19.43■□□□□ 0.7
CHAF1A-201ENST00000301280 CALD1Q05682 793 aaKnown RBP19.43■□□□□ 0.7
CHAF1A-201ENST00000301280 DIP2AQ14689 1571 aa19.43■□□□□ 0.7
CHAF1A-201ENST00000301280 ZNF853P0CG23 659 aa19.42■□□□□ 0.7
CHAF1A-201ENST00000301280 ESCO1Q5FWF5 840 aa19.42■□□□□ 0.7
CHAF1A-201ENST00000301280 ARHGAP23Q9P227 1491 aa19.42■□□□□ 0.7
CHAF1A-201ENST00000301280 SSH2Q76I76 1423 aa19.42■□□□□ 0.7
CHAF1A-201ENST00000301280 XRN1Q8IZH2 1706 aaKnown RBP19.41■□□□□ 0.7
CHAF1A-201ENST00000301280 MTHFSDQ2M296 383 aaKnown RBP19.41■□□□□ 0.7
CHAF1A-201ENST00000301280 RILPL2Q969X0 211 aa19.41■□□□□ 0.7
CHAF1A-201ENST00000301280 OVOS2A0A0J9YW53 1432 aa19.41■□□□□ 0.7
CHAF1A-201ENST00000301280 OVOS2Q6IE36 1432 aa19.41■□□□□ 0.7
CHAF1A-201ENST00000301280 ROBO2Q9HCK4 1378 aa19.41■□□□□ 0.7
CHAF1A-201ENST00000301280 TRIM6-TRIM34B2RNG4 842 aa19.41■□□□□ 0.7
CHAF1A-201ENST00000301280 ZBTB7BO15156 539 aaPredicted RBP19.41■□□□□ 0.7
CHAF1A-201ENST00000301280 CFAP44Q96MT7 982 aa19.41■□□□□ 0.7
CHAF1A-201ENST00000301280 LRRC37A3O60309 1634 aa19.4■□□□□ 0.7
CHAF1A-201ENST00000301280 TMEM2Q9UHN6 1383 aa19.4■□□□□ 0.7
CHAF1A-201ENST00000301280 KCNA6P17658 529 aa19.4■□□□□ 0.7
CHAF1A-201ENST00000301280 MAP3K19Q56UN5 1328 aa19.39■□□□□ 0.7
CHAF1A-201ENST00000301280 LMOD3Q0VAK6 560 aa19.39■□□□□ 0.69
CHAF1A-201ENST00000301280 SMC5Q8IY18 1101 aa19.39■□□□□ 0.69
CHAF1A-201ENST00000301280 CCDC9Q9Y3X0 531 aaKnown RBP19.39■□□□□ 0.69
CHAF1A-201ENST00000301280 SIRT2Q8IXJ6 389 aa19.39■□□□□ 0.69
CHAF1A-201ENST00000301280 STK31Q9BXU1 1019 aa19.39■□□□□ 0.69
CHAF1A-201ENST00000301280 IL1RAPL2Q9NP60 686 aa19.38■□□□□ 0.69
CHAF1A-201ENST00000301280 TNRQ92752 1358 aa19.38■□□□□ 0.69
CHAF1A-201ENST00000301280 PLEKHG1Q9ULL1 1385 aa19.38■□□□□ 0.69
CHAF1A-201ENST00000301280 IFT57Q9NWB7 429 aa19.38■□□□□ 0.69
CHAF1A-201ENST00000301280 API5Q9BZZ5 524 aaKnown RBP19.37■□□□□ 0.69
CHAF1A-201ENST00000301280 PSME1Q06323 249 aa19.36■□□□□ 0.69
CHAF1A-201ENST00000301280 ARHGAP45Q92619 1136 aa19.36■□□□□ 0.69
CHAF1A-201ENST00000301280 ZNF692Q9BU19 519 aaPredicted RBP19.36■□□□□ 0.69
CHAF1A-201ENST00000301280 TBC1D9Q6ZT07 1266 aa19.36■□□□□ 0.69
CHAF1A-201ENST00000301280 EYA1Q99502 592 aa19.36■□□□□ 0.69
CHAF1A-201ENST00000301280 RGPD8O14715 1765 aaPredicted RBP19.36■□□□□ 0.69
CHAF1A-201ENST00000301280 LRRC59Q96AG4 307 aaKnown RBP19.36■□□□□ 0.69
CHAF1A-201ENST00000301280 USP31Q70CQ4 1352 aa19.35■□□□□ 0.69
CHAF1A-201ENST00000301280 NUCB1Q02818 461 aa19.35■□□□□ 0.69
CHAF1A-201ENST00000301280 KIF24Q5T7B8 1368 aa19.35■□□□□ 0.69
CHAF1A-201ENST00000301280 AIMP1Q12904 312 aaKnown RBP19.34■□□□□ 0.69
CHAF1A-201ENST00000301280 CD2BP2O95400 341 aaKnown RBP19.34■□□□□ 0.69
CHAF1A-201ENST00000301280 LARP6Q9BRS8 491 aaKnown RBP19.34■□□□□ 0.69
CHAF1A-201ENST00000301280 TUBGCP6Q96RT7 1819 aa19.34■□□□□ 0.69
CHAF1A-201ENST00000301280 CHAMP1Q96JM3 812 aa19.33■□□□□ 0.69
CHAF1A-201ENST00000301280 ANTXR1Q9H6X2 564 aa19.33■□□□□ 0.69
CHAF1A-201ENST00000301280 ZC3H6P61129 1189 aaKnown RBP19.33■□□□□ 0.68
CHAF1A-201ENST00000301280 OS9Q13438 667 aaPredicted RBP19.33■□□□□ 0.68
CHAF1A-201ENST00000301280 PIK3C2AO00443 1686 aa19.33■□□□□ 0.68
CHAF1A-201ENST00000301280 A0A0G2JS52 829 aa19.32■□□□□ 0.68
CHAF1A-201ENST00000301280 FER1L4A9Z1Z3 1794 aa19.32■□□□□ 0.68
CHAF1A-201ENST00000301280 SETD1BQ9UPS6 1966 aaKnown RBP19.32■□□□□ 0.68
CHAF1A-201ENST00000301280 MPRIPQ6WCQ1 1025 aa19.32■□□□□ 0.68
CHAF1A-201ENST00000301280 TAOK2Q9UL54 1235 aa19.31■□□□□ 0.68
CHAF1A-201ENST00000301280 PIP4K2AP48426 406 aaPredicted RBP19.31■□□□□ 0.68
CHAF1A-201ENST00000301280 DDX17Q92841 729 aaKnown RBP19.31■□□□□ 0.68
CHAF1A-201ENST00000301280 ABCC4O15439 1325 aa19.31■□□□□ 0.68
CHAF1A-201ENST00000301280 CACNA1FO60840 1977 aa19.31■□□□□ 0.68
CHAF1A-201ENST00000301280 PTPRUQ92729 1446 aa19.3■□□□□ 0.68
CHAF1A-201ENST00000301280 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
CHAF1A-201ENST00000301280 USP6P35125 1406 aa19.29■□□□□ 0.68
CHAF1A-201ENST00000301280 JARID2Q92833 1246 aaPredicted RBP19.29■□□□□ 0.68
CHAF1A-201ENST00000301280 PLEKHG3A1L390 1219 aa19.28■□□□□ 0.68
CHAF1A-201ENST00000301280 PHAXQ9H814 394 aaKnown RBP19.28■□□□□ 0.68
CHAF1A-201ENST00000301280 NUTM1Q86Y26 1132 aa19.28■□□□□ 0.68
CHAF1A-201ENST00000301280 RGS12O14924 1447 aa19.28■□□□□ 0.68
CHAF1A-201ENST00000301280 NCOA3Q9Y6Q9 1424 aa19.28■□□□□ 0.68
CHAF1A-201ENST00000301280 PANK2Q9BZ23 570 aa19.27■□□□□ 0.68
CHAF1A-201ENST00000301280 ZNF330Q9Y3S2 320 aaPredicted RBP19.27■□□□□ 0.68
CHAF1A-201ENST00000301280 HDGFL1Q5TGJ6 251 aa19.27■□□□□ 0.67
CHAF1A-201ENST00000301280 FAM208AQ9UK61 1670 aaKnown RBP19.26■□□□□ 0.67
CHAF1A-201ENST00000301280 KCNQ3O43525 872 aa19.26■□□□□ 0.67
CHAF1A-201ENST00000301280 PHRF1Q9P1Y6 1649 aaKnown RBP19.26■□□□□ 0.67
CHAF1A-201ENST00000301280 THEMISQ8N1K5 641 aaPredicted RBP19.25■□□□□ 0.67
CHAF1A-201ENST00000301280 LGR6Q9HBX8 967 aa19.25■□□□□ 0.67
CHAF1A-201ENST00000301280 ANO2Q9NQ90 1003 aa19.25■□□□□ 0.67
CHAF1A-201ENST00000301280 CHMP5Q9NZZ3 219 aa19.25■□□□□ 0.67
CHAF1A-201ENST00000301280 TRAK2O60296 914 aa19.25■□□□□ 0.67
CHAF1A-201ENST00000301280 GSPT1P15170 499 aaKnown RBP19.25■□□□□ 0.67
CHAF1A-201ENST00000301280 GCC1Q96CN9 775 aa19.25■□□□□ 0.67
CHAF1A-201ENST00000301280 TEFQ10587 303 aa19.25■□□□□ 0.67
CHAF1A-201ENST00000301280 ORAI2Q96SN7 254 aa19.25■□□□□ 0.67
CHAF1A-201ENST00000301280 MSH6P52701 1360 aa19.24■□□□□ 0.67
CHAF1A-201ENST00000301280 MCM4P33991 863 aa19.24■□□□□ 0.67
CHAF1A-201ENST00000301280 RRAGDQ9NQL2 400 aaPredicted RBP19.24■□□□□ 0.67
CHAF1A-201ENST00000301280 LRRFIP2Q9Y608 721 aaKnown RBP19.24■□□□□ 0.67
CHAF1A-201ENST00000301280 CSB-PGBD3P0DP91 1061 aa19.24■□□□□ 0.67
CHAF1A-201ENST00000301280 CDC45O75419 566 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms