RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 NECTIN2Q92692 538 aa17.8■□□□□ 0.44
COL6A2-201ENST00000300527 CFAP44Q96MT7 982 aa17.8■□□□□ 0.44
COL6A2-201ENST00000300527 MCM5P33992 734 aa17.8■□□□□ 0.44
COL6A2-201ENST00000300527 PPP4R3BQ5MIZ7 849 aa17.8■□□□□ 0.44
COL6A2-201ENST00000300527 MTERF4Q7Z6M4 381 aaKnown RBP17.8■□□□□ 0.44
COL6A2-201ENST00000300527 ANKRD44Q8N8A2 993 aa17.8■□□□□ 0.44
COL6A2-201ENST00000300527 IFT57Q9NWB7 429 aa17.8■□□□□ 0.44
COL6A2-201ENST00000300527 ADCY5O95622 1261 aa17.8■□□□□ 0.44
COL6A2-201ENST00000300527 USP48Q86UV5 1035 aa17.8■□□□□ 0.44
COL6A2-201ENST00000300527 ZNF428Q96B54 188 aa17.8■□□□□ 0.44
COL6A2-201ENST00000300527 FIBPO43427 364 aa17.79■□□□□ 0.44
COL6A2-201ENST00000300527 MAP4K4O95819 1239 aaPredicted RBP17.79■□□□□ 0.44
COL6A2-201ENST00000300527 NOLC1Q14978 699 aaKnown RBP eCLIP17.79■□□□□ 0.44
COL6A2-201ENST00000300527 MCCP23508 829 aa17.79■□□□□ 0.44
COL6A2-201ENST00000300527 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
COL6A2-201ENST00000300527 MCM10Q7L590 875 aa17.78■□□□□ 0.44
COL6A2-201ENST00000300527 CCDC94Q9BW85 323 aaPredicted RBP17.78■□□□□ 0.44
COL6A2-201ENST00000300527 ADGRL1O94910 1474 aa17.78■□□□□ 0.44
COL6A2-201ENST00000300527 ZFYVE16Q7Z3T8 1539 aa17.78■□□□□ 0.44
COL6A2-201ENST00000300527 SMAP1Q8IYB5 467 aaPredicted RBP17.78■□□□□ 0.44
COL6A2-201ENST00000300527 QRICH2Q9H0J4 1663 aa17.77■□□□□ 0.44
COL6A2-201ENST00000300527 TET3O43151 1660 aa17.77■□□□□ 0.43
COL6A2-201ENST00000300527 NME9Q86XW9 330 aa17.77■□□□□ 0.43
COL6A2-201ENST00000300527 FANCAO15360 1455 aa17.76■□□□□ 0.43
COL6A2-201ENST00000300527 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
COL6A2-201ENST00000300527 MYRIPQ8NFW9 859 aa17.76■□□□□ 0.43
COL6A2-201ENST00000300527 CNPY2Q9Y2B0 182 aa17.76■□□□□ 0.43
COL6A2-201ENST00000300527 PHF14O94880 888 aa17.76■□□□□ 0.43
COL6A2-201ENST00000300527 ADGRB2O60241 1585 aa17.76■□□□□ 0.43
COL6A2-201ENST00000300527 ATP7AQ04656 1500 aa17.75■□□□□ 0.43
COL6A2-201ENST00000300527 BRD1O95696 1058 aa17.75■□□□□ 0.43
COL6A2-201ENST00000300527 PDE1AP54750 535 aa17.75■□□□□ 0.43
COL6A2-201ENST00000300527 WAPLQ7Z5K2 1190 aa17.75■□□□□ 0.43
COL6A2-201ENST00000300527 RPAP2Q8IXW5 612 aaPredicted RBP17.75■□□□□ 0.43
COL6A2-201ENST00000300527 MSH6P52701 1360 aa17.75■□□□□ 0.43
COL6A2-201ENST00000300527 GIMAP6Q6P9H5 292 aa17.74■□□□□ 0.43
COL6A2-201ENST00000300527 KIF3AQ9Y496 699 aa17.74■□□□□ 0.43
COL6A2-201ENST00000300527 TULP4Q9NRJ4 1543 aa17.74■□□□□ 0.43
COL6A2-201ENST00000300527 HMMRO75330 724 aa17.74■□□□□ 0.43
COL6A2-201ENST00000300527 AEBP1Q8IUX7 1158 aa17.74■□□□□ 0.43
COL6A2-201ENST00000300527 IDI1Q13907 227 aa17.74■□□□□ 0.43
COL6A2-201ENST00000300527 MED14O60244 1454 aa17.74■□□□□ 0.43
COL6A2-201ENST00000300527 SHROOM2Q13796 1616 aa17.73■□□□□ 0.43
COL6A2-201ENST00000300527 ZNF710Q8N1W2 664 aa17.73■□□□□ 0.43
COL6A2-201ENST00000300527 PTCH1Q13635 1447 aa17.73■□□□□ 0.43
COL6A2-201ENST00000300527 MROH2AA6NES4 1674 aa17.73■□□□□ 0.43
COL6A2-201ENST00000300527 KIF1BO60333 1816 aa17.73■□□□□ 0.43
COL6A2-201ENST00000300527 IL1RAPL2Q9NP60 686 aa17.73■□□□□ 0.43
COL6A2-201ENST00000300527 KIAA1210Q9ULL0 1709 aa17.72■□□□□ 0.43
COL6A2-201ENST00000300527 LMOD3Q0VAK6 560 aa17.72■□□□□ 0.43
COL6A2-201ENST00000300527 DDX54Q8TDD1 881 aaKnown RBP17.72■□□□□ 0.43
COL6A2-201ENST00000300527 BRPF1P55201 1214 aaPredicted RBP17.72■□□□□ 0.43
COL6A2-201ENST00000300527 ATP2B3Q16720 1220 aa17.72■□□□□ 0.43
COL6A2-201ENST00000300527 CHAF1AQ13111 956 aaPredicted RBP17.71■□□□□ 0.43
COL6A2-201ENST00000300527 ESYT1Q9BSJ8 1104 aa17.71■□□□□ 0.43
COL6A2-201ENST00000300527 NPATQ14207 1427 aa17.71■□□□□ 0.43
COL6A2-201ENST00000300527 SULT6B1Q6IMI4 303 aa17.71■□□□□ 0.43
COL6A2-201ENST00000300527 PIBF1Q8WXW3 757 aa17.71■□□□□ 0.43
COL6A2-201ENST00000300527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.71■□□□□ 0.43
COL6A2-201ENST00000300527 NUTM2FA1L443 756 aa17.71■□□□□ 0.43
COL6A2-201ENST00000300527 HMGN5P82970 282 aaKnown RBP17.7■□□□□ 0.42
COL6A2-201ENST00000300527 G2E3Q7L622 706 aa17.7■□□□□ 0.42
COL6A2-201ENST00000300527 NCKAP5LQ9HCH0 1330 aa17.7■□□□□ 0.42
COL6A2-201ENST00000300527 PDCL2Q8N4E4 241 aa17.7■□□□□ 0.42
COL6A2-201ENST00000300527 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
COL6A2-201ENST00000300527 BCL2L12Q9HB09 334 aa17.7■□□□□ 0.42
COL6A2-201ENST00000300527 LRRC7Q96NW7 1537 aa17.7■□□□□ 0.42
COL6A2-201ENST00000300527 DRC7Q8IY82 874 aa17.7■□□□□ 0.42
COL6A2-201ENST00000300527 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
COL6A2-201ENST00000300527 CPA1P15085 419 aa17.69■□□□□ 0.42
COL6A2-201ENST00000300527 U2AF2P26368 475 aaKnown RBP eCLIP17.69■□□□□ 0.42
COL6A2-201ENST00000300527 RPGRIP1LQ68CZ1 1315 aa17.69■□□□□ 0.42
COL6A2-201ENST00000300527 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
COL6A2-201ENST00000300527 WDR33Q9C0J8 1336 aaKnown RBP17.68■□□□□ 0.42
COL6A2-201ENST00000300527 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
COL6A2-201ENST00000300527 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
COL6A2-201ENST00000300527 PIK3R4Q99570 1358 aa17.68■□□□□ 0.42
COL6A2-201ENST00000300527 CCDC183Q5T5S1 534 aa17.68■□□□□ 0.42
COL6A2-201ENST00000300527 UNC5CLQ8IV45 518 aa17.68■□□□□ 0.42
COL6A2-201ENST00000300527 PYCARDQ9ULZ3 195 aa17.68■□□□□ 0.42
COL6A2-201ENST00000300527 VPS37CA5D8V6 355 aaPredicted RBP17.67■□□□□ 0.42
COL6A2-201ENST00000300527 ZSCAN20P17040 1043 aaPredicted RBP17.67■□□□□ 0.42
COL6A2-201ENST00000300527 IL13P35225 146 aa17.67■□□□□ 0.42
COL6A2-201ENST00000300527 MCM2P49736 904 aa17.67■□□□□ 0.42
COL6A2-201ENST00000300527 ADGRB1O14514 1584 aa17.67■□□□□ 0.42
COL6A2-201ENST00000300527 MX1P20591 662 aa17.67■□□□□ 0.42
COL6A2-201ENST00000300527 DMTNQ08495 405 aa17.67■□□□□ 0.42
COL6A2-201ENST00000300527 PRIMPOLQ96LW4 560 aa17.67■□□□□ 0.42
COL6A2-201ENST00000300527 FAM135BQ49AJ0 1406 aa17.67■□□□□ 0.42
COL6A2-201ENST00000300527 RIOK3O14730 519 aaKnown RBP17.66■□□□□ 0.42
COL6A2-201ENST00000300527 NRXN1Q9ULB1 1477 aa17.66■□□□□ 0.42
COL6A2-201ENST00000300527 CAMK4Q16566 473 aa17.66■□□□□ 0.42
COL6A2-201ENST00000300527 COG3Q96JB2 828 aa17.66■□□□□ 0.42
COL6A2-201ENST00000300527 PUS7Q96PZ0 661 aaKnown RBP17.66■□□□□ 0.42
COL6A2-201ENST00000300527 LRRCC1Q9C099 1032 aa17.66■□□□□ 0.42
COL6A2-201ENST00000300527 EFCAB6Q5THR3 1501 aa17.65■□□□□ 0.42
COL6A2-201ENST00000300527 RAPGEF3O95398 923 aa17.65■□□□□ 0.42
COL6A2-201ENST00000300527 CHMLP26374 656 aa17.65■□□□□ 0.42
COL6A2-201ENST00000300527 SMC3Q9UQE7 1217 aa17.65■□□□□ 0.42
COL6A2-201ENST00000300527 FKBP5Q13451 457 aaPredicted RBP17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms