RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 USHBP1Q8N6Y0 703 aa19.15■□□□□ 0.66
TMEM41B-201ENST00000299596 PPP1R1BQ9UD71 204 aaPredicted RBP19.14■□□□□ 0.65
TMEM41B-201ENST00000299596 MEGF6O75095 1541 aa19.14■□□□□ 0.65
TMEM41B-201ENST00000299596 PPM1GO15355 546 aaPredicted RBP19.13■□□□□ 0.65
TMEM41B-201ENST00000299596 PRIM1P49642 420 aaKnown RBP19.13■□□□□ 0.65
TMEM41B-201ENST00000299596 SYTL4Q96C24 671 aaPredicted RBP19.13■□□□□ 0.65
TMEM41B-201ENST00000299596 WASHC2AQ641Q2 1341 aa19.12■□□□□ 0.65
TMEM41B-201ENST00000299596 SLC27A3Q5K4L6 730 aa19.11■□□□□ 0.65
TMEM41B-201ENST00000299596 PANK3Q9H999 370 aa19.11■□□□□ 0.65
TMEM41B-201ENST00000299596 PDGFDQ9GZP0 370 aaPredicted RBP19.1■□□□□ 0.65
TMEM41B-201ENST00000299596 POLKQ9UBT6 870 aa19.1■□□□□ 0.65
TMEM41B-201ENST00000299596 RGPD2P0DJD1 1756 aa19.1■□□□□ 0.65
TMEM41B-201ENST00000299596 LRRC4BQ9NT99 713 aa19.09■□□□□ 0.65
TMEM41B-201ENST00000299596 BTAF1O14981 1849 aa19.09■□□□□ 0.65
TMEM41B-201ENST00000299596 PCDH11XQ9BZA7 1347 aa19.09■□□□□ 0.65
TMEM41B-201ENST00000299596 PCDH11YQ9BZA8 1340 aa19.09■□□□□ 0.65
TMEM41B-201ENST00000299596 ZBTB7AO95365 584 aa19.08■□□□□ 0.65
TMEM41B-201ENST00000299596 KAT6BQ8WYB5 2073 aa19.07■□□□□ 0.64
TMEM41B-201ENST00000299596 MTFR1LQ9H019 292 aa19.07■□□□□ 0.64
TMEM41B-201ENST00000299596 CASZ1Q86V15 1759 aa19.06■□□□□ 0.64
TMEM41B-201ENST00000299596 TNNT2P45379 298 aaPredicted RBP19.06■□□□□ 0.64
TMEM41B-201ENST00000299596 ATF5Q9Y2D1 282 aaPredicted RBP19.06■□□□□ 0.64
TMEM41B-201ENST00000299596 NSD2O96028 1365 aa19.05■□□□□ 0.64
TMEM41B-201ENST00000299596 EYA1Q99502 592 aa19.05■□□□□ 0.64
TMEM41B-201ENST00000299596 PTGER2P43116 358 aa19.04■□□□□ 0.64
TMEM41B-201ENST00000299596 ZNF827Q17R98 1081 aa19.04■□□□□ 0.64
TMEM41B-201ENST00000299596 AKT1S1Q96B36 256 aa19.04■□□□□ 0.64
TMEM41B-201ENST00000299596 SPG7Q9UQ90 795 aa19.04■□□□□ 0.64
TMEM41B-201ENST00000299596 NCAPD2Q15021 1401 aa19.04■□□□□ 0.64
TMEM41B-201ENST00000299596 SHANK3Q9BYB0 1731 aa19.03■□□□□ 0.64
TMEM41B-201ENST00000299596 CYP27B1O15528 508 aa19.03■□□□□ 0.64
TMEM41B-201ENST00000299596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.03■□□□□ 0.645e-11■■■□□ 17.1
TMEM41B-201ENST00000299596 PAPPAQ13219 1627 aa19.02■□□□□ 0.64
TMEM41B-201ENST00000299596 HMGB2P26583 209 aaKnown RBP19.02■□□□□ 0.64
TMEM41B-201ENST00000299596 KNSTRNQ9Y448 316 aa19.02■□□□□ 0.64
TMEM41B-201ENST00000299596 DCAF8L1A6NGE4 600 aa19.01■□□□□ 0.63
TMEM41B-201ENST00000299596 EIF4A2Q14240 407 aaKnown RBP19.01■□□□□ 0.63
TMEM41B-201ENST00000299596 DOT1LQ8TEK3 1739 aa19.01■□□□□ 0.63
TMEM41B-201ENST00000299596 CCNL1Q9UK58 526 aaPredicted RBP19.01■□□□□ 0.63
TMEM41B-201ENST00000299596 ANKRD26Q9UPS8 1709 aa19.01■□□□□ 0.63
TMEM41B-201ENST00000299596 KCNQ4P56696 695 aa19■□□□□ 0.63
TMEM41B-201ENST00000299596 NKX1-1Q15270 411 aaPredicted RBP19■□□□□ 0.63
TMEM41B-201ENST00000299596 MORC1Q86VD1 984 aa19■□□□□ 0.63
TMEM41B-201ENST00000299596 SLC16A10Q8TF71 515 aa19■□□□□ 0.63
TMEM41B-201ENST00000299596 TFCP2L1Q9NZI6 479 aa19■□□□□ 0.63
TMEM41B-201ENST00000299596 MAP2P11137 1827 aaKnown RBP19■□□□□ 0.63
TMEM41B-201ENST00000299596 MPRIPQ6WCQ1 1025 aa19■□□□□ 0.63
TMEM41B-201ENST00000299596 SGIP1Q9BQI5 828 aa18.99■□□□□ 0.63
TMEM41B-201ENST00000299596 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
TMEM41B-201ENST00000299596 KIF7Q2M1P5 1343 aa18.97■□□□□ 0.63
TMEM41B-201ENST00000299596 PLEKHG2Q9H7P9 1386 aa18.97■□□□□ 0.63
TMEM41B-201ENST00000299596 IFNL2Q8IZJ0 200 aa18.96■□□□□ 0.63
TMEM41B-201ENST00000299596 PNPLA7Q6ZV29 1317 aa18.96■□□□□ 0.63
TMEM41B-201ENST00000299596 ARXQ96QS3 562 aa18.95■□□□□ 0.62
TMEM41B-201ENST00000299596 IGSF1Q8N6C5 1336 aa18.95■□□□□ 0.62
TMEM41B-201ENST00000299596 PALLDQ8WX93 1383 aa18.95■□□□□ 0.62
TMEM41B-201ENST00000299596 LY75O60449 1722 aa18.95■□□□□ 0.62
TMEM41B-201ENST00000299596 PHKG2P15735 406 aa18.94■□□□□ 0.62
TMEM41B-201ENST00000299596 PIGBQ92521 554 aa18.94■□□□□ 0.62
TMEM41B-201ENST00000299596 SYT17Q9BSW7 474 aa18.94■□□□□ 0.62
TMEM41B-201ENST00000299596 FHDC1Q9C0D6 1143 aaPredicted RBP18.94■□□□□ 0.62
TMEM41B-201ENST00000299596 PKD1L3Q7Z443 1732 aa18.94■□□□□ 0.62
TMEM41B-201ENST00000299596 AMER1Q5JTC6 1135 aaPredicted RBP18.93■□□□□ 0.62
TMEM41B-201ENST00000299596 POLD1P28340 1107 aa18.92■□□□□ 0.62
TMEM41B-201ENST00000299596 TMOD3Q9NYL9 352 aa18.91■□□□□ 0.62
TMEM41B-201ENST00000299596 PLEKHO1Q53GL0 409 aaPredicted RBP18.91■□□□□ 0.62
TMEM41B-201ENST00000299596 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
TMEM41B-201ENST00000299596 AMOTQ4VCS5 1084 aa18.9■□□□□ 0.62
TMEM41B-201ENST00000299596 FLAD1Q8NFF5 587 aa18.9■□□□□ 0.62
TMEM41B-201ENST00000299596 QSER1Q2KHR3 1735 aa18.89■□□□□ 0.62
TMEM41B-201ENST00000299596 PER1O15534 1290 aaPredicted RBP18.89■□□□□ 0.61
TMEM41B-201ENST00000299596 MSH5O43196 834 aa18.89■□□□□ 0.61
TMEM41B-201ENST00000299596 COL23A1Q86Y22 540 aaPredicted RBP18.89■□□□□ 0.61
TMEM41B-201ENST00000299596 MAP3K5Q99683 1374 aa18.88■□□□□ 0.61
TMEM41B-201ENST00000299596 TOGARAM1Q9Y4F4 1720 aa18.87■□□□□ 0.61
TMEM41B-201ENST00000299596 ERVV-2B6SEH9 535 aa18.87■□□□□ 0.61
TMEM41B-201ENST00000299596 YY1P25490 414 aa18.87■□□□□ 0.61
TMEM41B-201ENST00000299596 DCAF5Q96JK2 942 aa18.87■□□□□ 0.61
TMEM41B-201ENST00000299596 LOC102724428A0A0B4J2F2 783 aa18.86■□□□□ 0.61
TMEM41B-201ENST00000299596 IL13P35225 146 aa18.86■□□□□ 0.61
TMEM41B-201ENST00000299596 SIK1P57059 783 aa18.86■□□□□ 0.61
TMEM41B-201ENST00000299596 ASAP1Q9ULH1 1129 aa18.86■□□□□ 0.61
TMEM41B-201ENST00000299596 SULT6B1Q6IMI4 303 aa18.85■□□□□ 0.61
TMEM41B-201ENST00000299596 ZNF530Q6P9A1 599 aaPredicted RBP18.85■□□□□ 0.61
TMEM41B-201ENST00000299596 AEBP1Q8IUX7 1158 aa18.85■□□□□ 0.61
TMEM41B-201ENST00000299596 AK7Q96M32 723 aa18.85■□□□□ 0.61
TMEM41B-201ENST00000299596 ITGB4P16144 1822 aa18.85■□□□□ 0.61
TMEM41B-201ENST00000299596 MTHFSP49914 203 aa18.84■□□□□ 0.61
TMEM41B-201ENST00000299596 CC2D1BQ5T0F9 858 aaKnown RBP18.83■□□□□ 0.61
TMEM41B-201ENST00000299596 ATG3Q9NT62 314 aa18.83■□□□□ 0.61
TMEM41B-201ENST00000299596 UTRNP46939 3433 aa18.83■□□□□ 0.61
TMEM41B-201ENST00000299596 ATP6V1AP38606 617 aa18.83■□□□□ 0.6
TMEM41B-201ENST00000299596 C1orf141Q5JVX7 400 aa18.83■□□□□ 0.6
TMEM41B-201ENST00000299596 KDRP35968 1356 aa18.83■□□□□ 0.6
TMEM41B-201ENST00000299596 C5P01031 1676 aa18.82■□□□□ 0.6
TMEM41B-201ENST00000299596 CABP4P57796 275 aa18.82■□□□□ 0.6
TMEM41B-201ENST00000299596 KLHL34Q8N239 644 aa18.82■□□□□ 0.6
TMEM41B-201ENST00000299596 TUBGCP6Q96RT7 1819 aa18.82■□□□□ 0.6
TMEM41B-201ENST00000299596 NPC1L1Q9UHC9 1359 aa18.81■□□□□ 0.6
TMEM41B-201ENST00000299596 LINC00116Q8NCU8 138 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms