RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 USP48Q86UV5 1035 aa13.79□□□□□ -0.2
TRUB1-201ENST00000298746 NECTIN2Q92692 538 aa13.79□□□□□ -0.2
TRUB1-201ENST00000298746 DTNBO60941 627 aa13.79□□□□□ -0.2
TRUB1-201ENST00000298746 CYP2E1P05181 493 aaPredicted RBP13.79□□□□□ -0.2
TRUB1-201ENST00000298746 MCM2P49736 904 aa13.79□□□□□ -0.2
TRUB1-201ENST00000298746 ANKRD44Q8N8A2 993 aa13.79□□□□□ -0.2
TRUB1-201ENST00000298746 CDK19Q9BWU1 502 aa13.79□□□□□ -0.2
TRUB1-201ENST00000298746 SPHKAPQ2M3C7 1700 aa13.79□□□□□ -0.2
TRUB1-201ENST00000298746 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
TRUB1-201ENST00000298746 HAP1P54257 671 aaPredicted RBP13.78□□□□□ -0.2
TRUB1-201ENST00000298746 RRS1Q15050 365 aaKnown RBP13.78□□□□□ -0.2
TRUB1-201ENST00000298746 MYRIPQ8NFW9 859 aa13.78□□□□□ -0.2
TRUB1-201ENST00000298746 PDCL2Q8N4E4 241 aa13.78□□□□□ -0.2
TRUB1-201ENST00000298746 PRDM4Q9UKN5 801 aa13.78□□□□□ -0.2
TRUB1-201ENST00000298746 F6X3S4 739 aa13.78□□□□□ -0.2
TRUB1-201ENST00000298746 MAP4K4O95819 1239 aaPredicted RBP13.77□□□□□ -0.21
TRUB1-201ENST00000298746 CEP85Q6P2H3 762 aa13.77□□□□□ -0.21
TRUB1-201ENST00000298746 ZNF771Q7L3S4 317 aaPredicted RBP13.77□□□□□ -0.21
TRUB1-201ENST00000298746 MIS18AQ9NYP9 233 aa13.77□□□□□ -0.21
TRUB1-201ENST00000298746 WDR33Q9C0J8 1336 aaKnown RBP13.77□□□□□ -0.21
TRUB1-201ENST00000298746 FAM184AQ8NB25 1140 aa13.77□□□□□ -0.21
TRUB1-201ENST00000298746 PRIMPOLQ96LW4 560 aa13.77□□□□□ -0.21
TRUB1-201ENST00000298746 POLKQ9UBT6 870 aa13.77□□□□□ -0.21
TRUB1-201ENST00000298746 ABCC4O15439 1325 aa13.77□□□□□ -0.21
TRUB1-201ENST00000298746 DIAPH3Q9NSV4 1193 aa13.76□□□□□ -0.21
TRUB1-201ENST00000298746 GOLGA6L4A6NEF3 574 aa13.76□□□□□ -0.21
TRUB1-201ENST00000298746 ABCA6Q8N139 1617 aa13.76□□□□□ -0.21
TRUB1-201ENST00000298746 VPS37CA5D8V6 355 aaPredicted RBP13.76□□□□□ -0.21
TRUB1-201ENST00000298746 GOLGA6L6A8MZA4 724 aa13.76□□□□□ -0.21
TRUB1-201ENST00000298746 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
TRUB1-201ENST00000298746 PDE1AP54750 535 aa13.76□□□□□ -0.21
TRUB1-201ENST00000298746 GIMAP6Q6P9H5 292 aa13.76□□□□□ -0.21
TRUB1-201ENST00000298746 MCM10Q7L590 875 aa13.76□□□□□ -0.21
TRUB1-201ENST00000298746 CNPY2Q9Y2B0 182 aa13.76□□□□□ -0.21
TRUB1-201ENST00000298746 MAP3K4Q9Y6R4 1608 aa13.75□□□□□ -0.21
TRUB1-201ENST00000298746 SMC3Q9UQE7 1217 aa13.75□□□□□ -0.21
TRUB1-201ENST00000298746 BRD1O95696 1058 aa13.75□□□□□ -0.21
TRUB1-201ENST00000298746 ZNF592Q92610 1267 aa13.75□□□□□ -0.21
TRUB1-201ENST00000298746 PALD1Q9ULE6 856 aa13.75□□□□□ -0.21
TRUB1-201ENST00000298746 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
TRUB1-201ENST00000298746 CCDC183Q5T5S1 534 aa13.74□□□□□ -0.21
TRUB1-201ENST00000298746 PIBF1Q8WXW3 757 aa13.74□□□□□ -0.21
TRUB1-201ENST00000298746 IL1RAPL2Q9NP60 686 aa13.74□□□□□ -0.21
TRUB1-201ENST00000298746 ADGRL1O94910 1474 aa13.73□□□□□ -0.21
TRUB1-201ENST00000298746 KCNJ4P48050 445 aa13.73□□□□□ -0.21
TRUB1-201ENST00000298746 COG3Q96JB2 828 aa13.73□□□□□ -0.21
TRUB1-201ENST00000298746 STK31Q9BXU1 1019 aa13.73□□□□□ -0.21
TRUB1-201ENST00000298746 MYOM2P54296 1465 aa13.73□□□□□ -0.21
TRUB1-201ENST00000298746 RPGRIP1LQ68CZ1 1315 aa13.73□□□□□ -0.21
TRUB1-201ENST00000298746 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
TRUB1-201ENST00000298746 SULT6B1Q6IMI4 303 aa13.73□□□□□ -0.21
TRUB1-201ENST00000298746 RTF1Q92541 710 aaKnown RBP13.73□□□□□ -0.21
TRUB1-201ENST00000298746 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
TRUB1-201ENST00000298746 NME9Q86XW9 330 aa13.73□□□□□ -0.21
TRUB1-201ENST00000298746 ESYT1Q9BSJ8 1104 aa13.73□□□□□ -0.21
TRUB1-201ENST00000298746 LRRCC1Q9C099 1032 aa13.73□□□□□ -0.21
TRUB1-201ENST00000298746 ZRANB1Q9UGI0 708 aa13.73□□□□□ -0.21
TRUB1-201ENST00000298746 FKBP5Q13451 457 aaPredicted RBP13.72□□□□□ -0.21
TRUB1-201ENST00000298746 NUTM2FA1L443 756 aa13.72□□□□□ -0.21
TRUB1-201ENST00000298746 MX1P20591 662 aa13.72□□□□□ -0.21
TRUB1-201ENST00000298746 ATP6V1DQ9Y5K8 247 aa13.72□□□□□ -0.21
TRUB1-201ENST00000298746 CFAP74Q9C0B2 1584 aa13.72□□□□□ -0.21
TRUB1-201ENST00000298746 OS9Q13438 667 aaPredicted RBP13.71□□□□□ -0.21
TRUB1-201ENST00000298746 BCL2L12Q9HB09 334 aa13.71□□□□□ -0.21
TRUB1-201ENST00000298746 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRUB1-201ENST00000298746 BRPF1P55201 1214 aaPredicted RBP13.71□□□□□ -0.21
TRUB1-201ENST00000298746 GNAI2P04899 355 aa13.71□□□□□ -0.22
TRUB1-201ENST00000298746 WAPLQ7Z5K2 1190 aa13.71□□□□□ -0.22
TRUB1-201ENST00000298746 DDX54Q8TDD1 881 aaKnown RBP13.71□□□□□ -0.22
TRUB1-201ENST00000298746 FANCAO15360 1455 aa13.7□□□□□ -0.22
TRUB1-201ENST00000298746 MSH6P52701 1360 aa13.7□□□□□ -0.22
TRUB1-201ENST00000298746 IDI1Q13907 227 aa13.7□□□□□ -0.22
TRUB1-201ENST00000298746 CAMK4Q16566 473 aa13.7□□□□□ -0.22
TRUB1-201ENST00000298746 UVSSAQ2YD98 709 aa13.7□□□□□ -0.22
TRUB1-201ENST00000298746 SRCIN1Q9C0H9 1055 aa13.7□□□□□ -0.22
TRUB1-201ENST00000298746 DMTNQ08495 405 aa13.7□□□□□ -0.22
TRUB1-201ENST00000298746 LETM1O95202 739 aaPredicted RBP13.7□□□□□ -0.22
TRUB1-201ENST00000298746 NUTM1Q86Y26 1132 aa13.7□□□□□ -0.22
TRUB1-201ENST00000298746 C16orf45Q96MC5 204 aaPredicted RBP13.7□□□□□ -0.22
TRUB1-201ENST00000298746 PUS7Q96PZ0 661 aaKnown RBP13.7□□□□□ -0.22
TRUB1-201ENST00000298746 TSPYL4Q9UJ04 414 aa13.7□□□□□ -0.22
TRUB1-201ENST00000298746 RIOK3O14730 519 aaKnown RBP13.69□□□□□ -0.22
TRUB1-201ENST00000298746 CDK11BP21127 795 aaKnown RBP13.69□□□□□ -0.22
TRUB1-201ENST00000298746 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
TRUB1-201ENST00000298746 KIF1BO60333 1816 aa13.69□□□□□ -0.22
TRUB1-201ENST00000298746 ABCC1P33527 1531 aa13.69□□□□□ -0.22
TRUB1-201ENST00000298746 KDM4AO75164 1064 aa13.68□□□□□ -0.22
TRUB1-201ENST00000298746 ATP2B3Q16720 1220 aa13.68□□□□□ -0.22
TRUB1-201ENST00000298746 FERMT3Q86UX7 667 aa13.68□□□□□ -0.22
TRUB1-201ENST00000298746 TRIM5Q9C035 493 aa13.68□□□□□ -0.22
TRUB1-201ENST00000298746 STX6O43752 255 aa13.68□□□□□ -0.22
TRUB1-201ENST00000298746 INTS4Q96HW7 963 aaKnown RBP13.68□□□□□ -0.22
TRUB1-201ENST00000298746 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.68□□□□□ -0.22
TRUB1-201ENST00000298746 UBE2HP62256 183 aa13.67□□□□□ -0.22
TRUB1-201ENST00000298746 CCDC83Q8IWF9 413 aa13.67□□□□□ -0.22
TRUB1-201ENST00000298746 PTCH1Q13635 1447 aa13.67□□□□□ -0.22
TRUB1-201ENST00000298746 TET3O43151 1660 aa13.67□□□□□ -0.22
TRUB1-201ENST00000298746 CCDC192P0DO97 292 aa13.67□□□□□ -0.22
TRUB1-201ENST00000298746 CHMLP26374 656 aa13.67□□□□□ -0.22
TRUB1-201ENST00000298746 ZSCAN22P10073 491 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms