RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 RGPD2P0DJD1 1756 aa32.94■■■□□ 2.86
SDCCAG3-201ENST00000298537 CRB1P82279 1406 aa32.94■■■□□ 2.86
SDCCAG3-201ENST00000298537 TWISTNBQ3B726 338 aaPredicted RBP32.93■■■□□ 2.86
SDCCAG3-201ENST00000298537 CHL1O00533 1208 aa32.91■■■□□ 2.86
SDCCAG3-201ENST00000298537 DZIP1LQ8IYY4 767 aaKnown RBP32.91■■■□□ 2.86
SDCCAG3-201ENST00000298537 IGHDP01880 384 aa32.91■■■□□ 2.86
SDCCAG3-201ENST00000298537 BRINP3Q76B58 766 aa32.91■■■□□ 2.86
SDCCAG3-201ENST00000298537 GAS2L2Q8NHY3 880 aa32.9■■■□□ 2.86
SDCCAG3-201ENST00000298537 ATF7IPQ6VMQ6 1270 aa32.9■■■□□ 2.86
SDCCAG3-201ENST00000298537 FTSJ3Q8IY81 847 aaKnown RBP32.9■■■□□ 2.86
SDCCAG3-201ENST00000298537 ALDH1L2Q3SY69 923 aa32.89■■■□□ 2.86
SDCCAG3-201ENST00000298537 NPHP3Q7Z494 1330 aa32.89■■■□□ 2.86
SDCCAG3-201ENST00000298537 RTF1Q92541 710 aaKnown RBP32.89■■■□□ 2.86
SDCCAG3-201ENST00000298537 PHRF1Q9P1Y6 1649 aaKnown RBP32.88■■■□□ 2.85
SDCCAG3-201ENST00000298537 ANKRD24Q8TF21 1146 aa32.88■■■□□ 2.85
SDCCAG3-201ENST00000298537 MVPQ14764 893 aaKnown RBP32.87■■■□□ 2.85
SDCCAG3-201ENST00000298537 MRPL50Q8N5N7 158 aaKnown RBP32.87■■■□□ 2.85
SDCCAG3-201ENST00000298537 PXDNQ92626 1479 aa32.86■■■□□ 2.85
SDCCAG3-201ENST00000298537 PCDHB15Q9Y5E8 787 aa32.86■■■□□ 2.85
SDCCAG3-201ENST00000298537 CENPQQ7L2Z9 268 aaPredicted RBP32.85■■■□□ 2.85
SDCCAG3-201ENST00000298537 TMEM57Q8N5G2 664 aa32.84■■■□□ 2.85
SDCCAG3-201ENST00000298537 IL17REQ8NFR9 667 aa32.84■■■□□ 2.85
SDCCAG3-201ENST00000298537 GNAT3A8MTJ3 354 aa32.83■■■□□ 2.85
SDCCAG3-201ENST00000298537 SLAIN2Q9P270 581 aa32.83■■■□□ 2.85
SDCCAG3-201ENST00000298537 KIF16BQ96L93 1317 aa32.82■■■□□ 2.84
SDCCAG3-201ENST00000298537 RGPD5Q99666 1765 aa32.82■■■□□ 2.84
SDCCAG3-201ENST00000298537 TNS3Q68CZ2 1445 aa32.82■■■□□ 2.84
SDCCAG3-201ENST00000298537 ITPRIPQ8IWB1 547 aa32.81■■■□□ 2.84
SDCCAG3-201ENST00000298537 SPATA31A3Q5VYP0 1347 aa32.81■■■□□ 2.84
SDCCAG3-201ENST00000298537 TSPYL4Q9UJ04 414 aa32.8■■■□□ 2.84
SDCCAG3-201ENST00000298537 ZNF428Q96B54 188 aa32.79■■■□□ 2.84
SDCCAG3-201ENST00000298537 MAP3K5Q99683 1374 aa32.79■■■□□ 2.84
SDCCAG3-201ENST00000298537 CHRNA2Q15822 529 aa32.79■■■□□ 2.84
SDCCAG3-201ENST00000298537 BRPF1P55201 1214 aaPredicted RBP32.77■■■□□ 2.84
SDCCAG3-201ENST00000298537 IPO8O15397 1037 aaKnown RBP32.76■■■□□ 2.83
SDCCAG3-201ENST00000298537 ERBB3P21860 1342 aa32.75■■■□□ 2.83
SDCCAG3-201ENST00000298537 LGR6Q9HBX8 967 aa32.74■■■□□ 2.83
SDCCAG3-201ENST00000298537 HTATSF1O43719 755 aaKnown RBP32.73■■■□□ 2.83
SDCCAG3-201ENST00000298537 LRRC37A3O60309 1634 aa32.73■■■□□ 2.83
SDCCAG3-201ENST00000298537 MS4A1P11836 297 aa32.72■■■□□ 2.83
SDCCAG3-201ENST00000298537 KIAA0232Q92628 1395 aa32.71■■■□□ 2.83
SDCCAG3-201ENST00000298537 NCAPD2Q15021 1401 aa32.7■■■□□ 2.83
SDCCAG3-201ENST00000298537 ZNF530Q6P9A1 599 aaPredicted RBP32.69■■■□□ 2.82
SDCCAG3-201ENST00000298537 DDX19BQ9UMR2 479 aa32.69■■■□□ 2.82
SDCCAG3-201ENST00000298537 CRYBG1Q9Y4K1 1723 aa32.67■■■□□ 2.82
SDCCAG3-201ENST00000298537 RGS3P49796 1198 aa32.67■■■□□ 2.82
SDCCAG3-201ENST00000298537 SOS2Q07890 1332 aaPredicted RBP32.67■■■□□ 2.82
SDCCAG3-201ENST00000298537 MPRIPQ6WCQ1 1025 aa32.67■■■□□ 2.82
SDCCAG3-201ENST00000298537 COL18A1P39060 1754 aa32.66■■■□□ 2.82
SDCCAG3-201ENST00000298537 NLRP2Q9NX02 1062 aa32.66■■■□□ 2.82
SDCCAG3-201ENST00000298537 ARHGAP45Q92619 1136 aa32.65■■■□□ 2.82
SDCCAG3-201ENST00000298537 ZBTB40Q9NUA8 1239 aa32.65■■■□□ 2.82
SDCCAG3-201ENST00000298537 TAF7Q15545 349 aaPredicted RBP32.64■■■□□ 2.82
SDCCAG3-201ENST00000298537 PLEKHO1Q53GL0 409 aaPredicted RBP32.64■■■□□ 2.82
SDCCAG3-201ENST00000298537 CAMTA1Q9Y6Y1 1673 aa32.64■■■□□ 2.82
SDCCAG3-201ENST00000298537 CEMIPQ8WUJ3 1361 aa32.64■■■□□ 2.81
SDCCAG3-201ENST00000298537 ABCC4O15439 1325 aa32.63■■■□□ 2.81
SDCCAG3-201ENST00000298537 AAMPQ13685 434 aa32.62■■■□□ 2.81
SDCCAG3-201ENST00000298537 NECTIN2Q92692 538 aa32.62■■■□□ 2.81
SDCCAG3-201ENST00000298537 AKAP4Q5JQC9 854 aa32.61■■■□□ 2.81
SDCCAG3-201ENST00000298537 G2E3Q7L622 706 aa32.61■■■□□ 2.81
SDCCAG3-201ENST00000298537 SLC4A2P04920 1241 aa32.6■■■□□ 2.81
SDCCAG3-201ENST00000298537 CSB-PGBD3P0DP91 1061 aa32.6■■■□□ 2.81
SDCCAG3-201ENST00000298537 LMO7Q8WWI1 1683 aa32.59■■■□□ 2.81
SDCCAG3-201ENST00000298537 KCNQ3O43525 872 aa32.59■■■□□ 2.81
SDCCAG3-201ENST00000298537 C1orf115Q9H7X2 142 aa32.59■■■□□ 2.81
SDCCAG3-201ENST00000298537 RGS12O14924 1447 aa32.59■■■□□ 2.81
SDCCAG3-201ENST00000298537 PDE4AP27815 886 aa32.59■■■□□ 2.81
SDCCAG3-201ENST00000298537 ZBTB7BO15156 539 aaPredicted RBP32.58■■■□□ 2.81
SDCCAG3-201ENST00000298537 AMOTQ4VCS5 1084 aa32.57■■■□□ 2.81
SDCCAG3-201ENST00000298537 API5Q9BZZ5 524 aaKnown RBP32.55■■■□□ 2.8
SDCCAG3-201ENST00000298537 FAM208AQ9UK61 1670 aaKnown RBP32.55■■■□□ 2.8
SDCCAG3-201ENST00000298537 C1orf141Q5JVX7 400 aa32.55■■■□□ 2.8
SDCCAG3-201ENST00000298537 RWDD1Q9H446 243 aaPredicted RBP32.55■■■□□ 2.8
SDCCAG3-201ENST00000298537 CPDO75976 1380 aa32.54■■■□□ 2.8
SDCCAG3-201ENST00000298537 MEGF6O75095 1541 aa32.54■■■□□ 2.8
SDCCAG3-201ENST00000298537 RNMTO43148 476 aaKnown RBP32.54■■■□□ 2.8
SDCCAG3-201ENST00000298537 BACH2Q9BYV9 841 aa32.52■■■□□ 2.8
SDCCAG3-201ENST00000298537 PRDM11Q9NQV5 511 aa32.52■■■□□ 2.8
SDCCAG3-201ENST00000298537 HAP1P54257 671 aaPredicted RBP32.52■■■□□ 2.8
SDCCAG3-201ENST00000298537 RAPGEF4Q8WZA2 1011 aa32.52■■■□□ 2.8
SDCCAG3-201ENST00000298537 PDZRN3Q9UPQ7 1066 aa32.52■■■□□ 2.8
SDCCAG3-201ENST00000298537 TEFQ10587 303 aa32.5■■■□□ 2.79
SDCCAG3-201ENST00000298537 F6X3S4 739 aa32.49■■■□□ 2.79
SDCCAG3-201ENST00000298537 BTBD11A6QL63 1104 aa32.48■■■□□ 2.79
SDCCAG3-201ENST00000298537 EIF4A1P60842 406 aaKnown RBP32.48■■■□□ 2.79
SDCCAG3-201ENST00000298537 BABAM1Q9NWV8 329 aa32.48■■■□□ 2.79
SDCCAG3-201ENST00000298537 HDAC1Q13547 482 aaPredicted RBP32.47■■■□□ 2.79
SDCCAG3-201ENST00000298537 NHSL1Q5SYE7 1610 aa32.46■■■□□ 2.79
SDCCAG3-201ENST00000298537 TATP17735 454 aaPredicted RBP32.46■■■□□ 2.79
SDCCAG3-201ENST00000298537 VIRMAQ69YN4 1812 aaKnown RBP32.45■■■□□ 2.79
SDCCAG3-201ENST00000298537 PTPRCP08575 1304 aa32.44■■■□□ 2.78
SDCCAG3-201ENST00000298537 INTS3Q68E01 1043 aaKnown RBP32.44■■■□□ 2.78
SDCCAG3-201ENST00000298537 STK31Q9BXU1 1019 aa32.43■■■□□ 2.78
SDCCAG3-201ENST00000298537 EIF2S2P20042 333 aaKnown RBP32.43■■■□□ 2.78
SDCCAG3-201ENST00000298537 CCDC30Q5VVM6 783 aa32.43■■■□□ 2.78
SDCCAG3-201ENST00000298537 SIRT2Q8IXJ6 389 aa32.43■■■□□ 2.78
SDCCAG3-201ENST00000298537 KDM3BQ7LBC6 1761 aa32.42■■■□□ 2.78
SDCCAG3-201ENST00000298537 ABCA3Q99758 1704 aa32.42■■■□□ 2.78
SDCCAG3-201ENST00000298537 HDGFL1Q5TGJ6 251 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms