RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 NBPF14Q5TI25 921 aa13.35□□□□□ -0.27
CNOT9-202ENST00000295701 TTC21BQ7Z4L5 1316 aa13.35□□□□□ -0.27
CNOT9-202ENST00000295701 EVC2Q86UK5 1308 aa13.35□□□□□ -0.27
CNOT9-202ENST00000295701 TRPM1Q7Z4N2 1603 aa13.35□□□□□ -0.27
CNOT9-202ENST00000295701 POTEFA5A3E0 1075 aa13.34□□□□□ -0.27
CNOT9-202ENST00000295701 DDB1Q16531 1140 aa13.34□□□□□ -0.27
CNOT9-202ENST00000295701 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
CNOT9-202ENST00000295701 LRRC37A3O60309 1634 aa13.34□□□□□ -0.27
CNOT9-202ENST00000295701 AKAP12Q02952 1782 aa13.33□□□□□ -0.28
CNOT9-202ENST00000295701 IER5LQ5T953 404 aa13.33□□□□□ -0.28
CNOT9-202ENST00000295701 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
CNOT9-202ENST00000295701 ARHGEF25Q86VW2 580 aa13.33□□□□□ -0.28
CNOT9-202ENST00000295701 WNK3Q9BYP7 1800 aa13.32□□□□□ -0.28
CNOT9-202ENST00000295701 OVOS2A0A0G2JMS6 1433 aa13.32□□□□□ -0.28
CNOT9-202ENST00000295701 OVOS2A0A0J9YW53 1432 aa13.32□□□□□ -0.28
CNOT9-202ENST00000295701 OVOS2Q6IE36 1432 aa13.32□□□□□ -0.28
CNOT9-202ENST00000295701 KAT6BQ8WYB5 2073 aa13.32□□□□□ -0.28
CNOT9-202ENST00000295701 SEC24BO95487 1268 aa13.32□□□□□ -0.28
CNOT9-202ENST00000295701 POTEJP0CG39 1038 aa13.32□□□□□ -0.28
CNOT9-202ENST00000295701 PDGFDQ9GZP0 370 aaPredicted RBP13.32□□□□□ -0.28
CNOT9-202ENST00000295701 ANO8Q9HCE9 1232 aaPredicted RBP13.32□□□□□ -0.28
CNOT9-202ENST00000295701 WDR17Q8IZU2 1322 aa13.32□□□□□ -0.28
CNOT9-202ENST00000295701 ROCK2O75116 1388 aaKnown RBP13.31□□□□□ -0.28
CNOT9-202ENST00000295701 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
CNOT9-202ENST00000295701 PLSCR1O15162 318 aa13.3□□□□□ -0.28
CNOT9-202ENST00000295701 KCNQ2O43526 872 aa13.3□□□□□ -0.28
CNOT9-202ENST00000295701 BCL11BQ9C0K0 894 aaPredicted RBP13.3□□□□□ -0.28
CNOT9-202ENST00000295701 COLQQ9Y215 455 aaPredicted RBP13.3□□□□□ -0.28
CNOT9-202ENST00000295701 CSB-PGBD3P0DP91 1061 aa13.29□□□□□ -0.28
CNOT9-202ENST00000295701 MAMSTRQ6ZN01 415 aa13.29□□□□□ -0.28
CNOT9-202ENST00000295701 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
CNOT9-202ENST00000295701 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
CNOT9-202ENST00000295701 SPON1Q9HCB6 807 aa13.29□□□□□ -0.28
CNOT9-202ENST00000295701 KCNH5Q8NCM2 988 aa13.28□□□□□ -0.28
CNOT9-202ENST00000295701 PPP1R1BQ9UD71 204 aaPredicted RBP13.28□□□□□ -0.28
CNOT9-202ENST00000295701 KTN1Q86UP2 1357 aaKnown RBP13.28□□□□□ -0.28
CNOT9-202ENST00000295701 NFAT5O94916 1531 aa13.28□□□□□ -0.28
CNOT9-202ENST00000295701 C11orf95C9JLR9 678 aaPredicted RBP13.27□□□□□ -0.29
CNOT9-202ENST00000295701 TTC21AQ8NDW8 1320 aa13.27□□□□□ -0.29
CNOT9-202ENST00000295701 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.29
CNOT9-202ENST00000295701 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.29
CNOT9-202ENST00000295701 EXOC5O00471 708 aa13.26□□□□□ -0.29
CNOT9-202ENST00000295701 MON2Q7Z3U7 1717 aa13.26□□□□□ -0.29
CNOT9-202ENST00000295701 CASZ1Q86V15 1759 aa13.26□□□□□ -0.29
CNOT9-202ENST00000295701 NME9Q86XW9 330 aa13.26□□□□□ -0.29
CNOT9-202ENST00000295701 ZBTB7AO95365 584 aa13.25□□□□□ -0.29
CNOT9-202ENST00000295701 YY1P25490 414 aa13.25□□□□□ -0.29
CNOT9-202ENST00000295701 ACSBG1Q96GR2 724 aa13.25□□□□□ -0.29
CNOT9-202ENST00000295701 CDCA7Q9BWT1 371 aaPredicted RBP13.25□□□□□ -0.29
CNOT9-202ENST00000295701 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
CNOT9-202ENST00000295701 TXNRD1Q16881 649 aa13.24□□□□□ -0.29
CNOT9-202ENST00000295701 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
CNOT9-202ENST00000295701 CD163L1Q9NR16 1453 aa13.23□□□□□ -0.29
CNOT9-202ENST00000295701 BCL9O00512 1426 aa13.23□□□□□ -0.29
CNOT9-202ENST00000295701 LTN1O94822 1766 aa13.23□□□□□ -0.29
CNOT9-202ENST00000295701 USP31Q70CQ4 1352 aa13.22□□□□□ -0.29
CNOT9-202ENST00000295701 CARD11Q9BXL7 1154 aa13.22□□□□□ -0.29
CNOT9-202ENST00000295701 SCUBE2Q9NQ36 999 aa13.22□□□□□ -0.29
CNOT9-202ENST00000295701 NLRP2Q9NX02 1062 aa13.22□□□□□ -0.29
CNOT9-202ENST00000295701 CCDC7Q96M83 1385 aa13.21□□□□□ -0.29
CNOT9-202ENST00000295701 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.29
CNOT9-202ENST00000295701 PTGER2P43116 358 aa13.21□□□□□ -0.29
CNOT9-202ENST00000295701 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
CNOT9-202ENST00000295701 ERBB3P21860 1342 aa13.2□□□□□ -0.3
CNOT9-202ENST00000295701 PLCG2P16885 1265 aa13.2□□□□□ -0.3
CNOT9-202ENST00000295701 PSEN1P49768 467 aa13.2□□□□□ -0.3
CNOT9-202ENST00000295701 SLC15A2Q16348 729 aa13.2□□□□□ -0.3
CNOT9-202ENST00000295701 ANKRD24Q8TF21 1146 aa13.2□□□□□ -0.3
CNOT9-202ENST00000295701 STK32BQ9NY57 414 aa13.2□□□□□ -0.3
CNOT9-202ENST00000295701 MYOM1P52179 1685 aa13.2□□□□□ -0.3
CNOT9-202ENST00000295701 TNS2Q63HR2 1409 aa13.2□□□□□ -0.3
CNOT9-202ENST00000295701 USP54Q70EL1 1684 aa13.19□□□□□ -0.3
CNOT9-202ENST00000295701 FBLN1P23142 703 aa13.19□□□□□ -0.3
CNOT9-202ENST00000295701 IRX5P78411 483 aaPredicted RBP13.19□□□□□ -0.3
CNOT9-202ENST00000295701 NHSQ6T4R5 1651 aa13.18□□□□□ -0.3
CNOT9-202ENST00000295701 BTAF1O14981 1849 aa13.18□□□□□ -0.3
CNOT9-202ENST00000295701 UTRNP46939 3433 aa13.18□□□□□ -0.3
CNOT9-202ENST00000295701 IL2RBP14784 551 aa13.18□□□□□ -0.3
CNOT9-202ENST00000295701 PDAP1Q13442 181 aaKnown RBP13.17□□□□□ -0.3
CNOT9-202ENST00000295701 HDGFL2Q7Z4V5 671 aaPredicted RBP13.17□□□□□ -0.3
CNOT9-202ENST00000295701 LTV1Q96GA3 475 aaPredicted RBP13.17□□□□□ -0.3
CNOT9-202ENST00000295701 ABCC6O95255 1503 aa13.17□□□□□ -0.3
CNOT9-202ENST00000295701 A0A1W2PP64 1363 aa13.17□□□□□ -0.3
CNOT9-202ENST00000295701 FHDC1Q9C0D6 1143 aaPredicted RBP13.16□□□□□ -0.3
CNOT9-202ENST00000295701 LRRC4BQ9NT99 713 aa13.16□□□□□ -0.3
CNOT9-202ENST00000295701 RGPD2P0DJD1 1756 aa13.16□□□□□ -0.3
CNOT9-202ENST00000295701 EDC4Q6P2E9 1401 aaKnown RBP13.15□□□□□ -0.3
CNOT9-202ENST00000295701 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
CNOT9-202ENST00000295701 ZNF827Q17R98 1081 aa13.15□□□□□ -0.3
CNOT9-202ENST00000295701 DDX54Q8TDD1 881 aaKnown RBP13.15□□□□□ -0.3
CNOT9-202ENST00000295701 OCEL1Q9H607 264 aa13.15□□□□□ -0.3
CNOT9-202ENST00000295701 KCNQ4P56696 695 aa13.14□□□□□ -0.31
CNOT9-202ENST00000295701 IP6K1Q92551 441 aa13.14□□□□□ -0.31
CNOT9-202ENST00000295701 SYT17Q9BSW7 474 aa13.14□□□□□ -0.31
CNOT9-202ENST00000295701 TERF2IPQ9NYB0 399 aa13.14□□□□□ -0.31
CNOT9-202ENST00000295701 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
CNOT9-202ENST00000295701 ST20-MTHFSA0A0A6YYL1 179 aa13.13□□□□□ -0.31
CNOT9-202ENST00000295701 TESK2Q96S53 571 aa13.13□□□□□ -0.31
CNOT9-202ENST00000295701 MTFR1LQ9H019 292 aa13.13□□□□□ -0.31
CNOT9-202ENST00000295701 MAP3K19Q56UN5 1328 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms