RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 ZBTB7CA1YPR0 619 aa17.68■□□□□ 0.42
NXF1-201ENST00000294172 CHMP4BQ9H444 224 aaKnown RBP17.68■□□□□ 0.42
NXF1-201ENST00000294172 CRB1P82279 1406 aa17.68■□□□□ 0.42
NXF1-201ENST00000294172 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
NXF1-201ENST00000294172 HAP1P54257 671 aaPredicted RBP17.67■□□□□ 0.42
NXF1-201ENST00000294172 TSPYL4Q9UJ04 414 aa17.67■□□□□ 0.42
NXF1-201ENST00000294172 ADGRL3Q9HAR2 1447 aa17.67■□□□□ 0.42
NXF1-201ENST00000294172 USHBP1Q8N6Y0 703 aa17.66■□□□□ 0.42
NXF1-201ENST00000294172 KIF24Q5T7B8 1368 aa17.66■□□□□ 0.42
NXF1-201ENST00000294172 XPCQ01831 940 aaPredicted RBP17.65■□□□□ 0.42
NXF1-201ENST00000294172 KIAA0232Q92628 1395 aa17.65■□□□□ 0.42
NXF1-201ENST00000294172 ORAI2Q96SN7 254 aa17.65■□□□□ 0.42
NXF1-201ENST00000294172 MARF1Q9Y4F3 1742 aaKnown RBP17.64■□□□□ 0.41
NXF1-201ENST00000294172 LNPKQ9C0E8 428 aa17.64■□□□□ 0.41
NXF1-201ENST00000294172 USP19O94966 1318 aa17.64■□□□□ 0.41
NXF1-201ENST00000294172 GNAT3A8MTJ3 354 aa17.63■□□□□ 0.41
NXF1-201ENST00000294172 NUCB1Q02818 461 aa17.63■□□□□ 0.41
NXF1-201ENST00000294172 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
NXF1-201ENST00000294172 LMOD2Q6P5Q4 547 aa17.63■□□□□ 0.41
NXF1-201ENST00000294172 VIRMAQ69YN4 1812 aaKnown RBP17.62■□□□□ 0.41
NXF1-201ENST00000294172 PROSER2Q86WR7 435 aaPredicted RBP17.62■□□□□ 0.41
NXF1-201ENST00000294172 UPF2Q9HAU5 1272 aaKnown RBP17.62■□□□□ 0.41
NXF1-201ENST00000294172 IP6K1Q92551 441 aa17.61■□□□□ 0.41
NXF1-201ENST00000294172 ANKRD45Q5TZF3 282 aa17.61■□□□□ 0.41
NXF1-201ENST00000294172 CHD1LQ86WJ1 897 aa17.61■□□□□ 0.41
NXF1-201ENST00000294172 HTATSF1O43719 755 aaKnown RBP17.6■□□□□ 0.41
NXF1-201ENST00000294172 SIRT2Q8IXJ6 389 aa17.6■□□□□ 0.41
NXF1-201ENST00000294172 KCNH5Q8NCM2 988 aa17.6■□□□□ 0.41
NXF1-201ENST00000294172 RTL1A6NKG5 1358 aa17.59■□□□□ 0.41
NXF1-201ENST00000294172 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
NXF1-201ENST00000294172 GCC1Q96CN9 775 aa17.59■□□□□ 0.41
NXF1-201ENST00000294172 NWD1Q149M9 1564 aa17.59■□□□□ 0.41
NXF1-201ENST00000294172 USP54Q70EL1 1684 aa17.58■□□□□ 0.41
NXF1-201ENST00000294172 DEKP35659 375 aaKnown RBP17.58■□□□□ 0.41
NXF1-201ENST00000294172 NBPF6Q5VWK0 638 aa17.58■□□□□ 0.41
NXF1-201ENST00000294172 IL17REQ8NFR9 667 aa17.58■□□□□ 0.41
NXF1-201ENST00000294172 NBPF4Q96M43 638 aa17.58■□□□□ 0.41
NXF1-201ENST00000294172 MAP3K5Q99683 1374 aa17.58■□□□□ 0.4
NXF1-201ENST00000294172 PTPRCP08575 1304 aa17.58■□□□□ 0.4
NXF1-201ENST00000294172 RTL5Q5HYW3 569 aaPredicted RBP17.57■□□□□ 0.4
NXF1-201ENST00000294172 RGS12O14924 1447 aa17.57■□□□□ 0.4
NXF1-201ENST00000294172 G2E3Q7L622 706 aa17.56■□□□□ 0.4
NXF1-201ENST00000294172 LTN1O94822 1766 aa17.56■□□□□ 0.4
NXF1-201ENST00000294172 GCP02774 474 aa17.56■□□□□ 0.4
NXF1-201ENST00000294172 NECTIN2Q92692 538 aa17.56■□□□□ 0.4
NXF1-201ENST00000294172 BCL11AQ9H165 835 aa17.56■□□□□ 0.4
NXF1-201ENST00000294172 NFAT5O94916 1531 aa17.56■□□□□ 0.4
NXF1-201ENST00000294172 SLC4A10Q6U841 1118 aa17.55■□□□□ 0.4
NXF1-201ENST00000294172 LRRC59Q96AG4 307 aaKnown RBP17.55■□□□□ 0.4
NXF1-201ENST00000294172 STK31Q9BXU1 1019 aa17.55■□□□□ 0.4
NXF1-201ENST00000294172 MSH6P52701 1360 aa17.54■□□□□ 0.4
NXF1-201ENST00000294172 TAF7Q15545 349 aaPredicted RBP17.54■□□□□ 0.4
NXF1-201ENST00000294172 TBC1D32Q96NH3 1257 aa17.54■□□□□ 0.4
NXF1-201ENST00000294172 F6X3S4 739 aa17.54■□□□□ 0.4
NXF1-201ENST00000294172 MFAP1P55081 439 aaKnown RBP17.54■□□□□ 0.4
NXF1-201ENST00000294172 KRT28Q7Z3Y7 464 aa17.54■□□□□ 0.4
NXF1-201ENST00000294172 C19orf44Q9H6X5 657 aa17.53■□□□□ 0.4
NXF1-201ENST00000294172 MEIS3Q99687 375 aa17.53■□□□□ 0.4
NXF1-201ENST00000294172 DNAJC5Q9H3Z4 198 aa17.53■□□□□ 0.4
NXF1-201ENST00000294172 CCDC30Q5VVM6 783 aa17.52■□□□□ 0.39
NXF1-201ENST00000294172 ARHGEF25Q86VW2 580 aa17.51■□□□□ 0.39
NXF1-201ENST00000294172 BECN1Q14457 450 aa17.5■□□□□ 0.39
NXF1-201ENST00000294172 CEP85Q6P2H3 762 aa17.5■□□□□ 0.39
NXF1-201ENST00000294172 ANKRD44Q8N8A2 993 aa17.5■□□□□ 0.39
NXF1-201ENST00000294172 LGR6Q9HBX8 967 aa17.5■□□□□ 0.39
NXF1-201ENST00000294172 FKBP5Q13451 457 aaPredicted RBP17.49■□□□□ 0.39
NXF1-201ENST00000294172 DCTPP1Q9H773 170 aa17.49■□□□□ 0.39
NXF1-201ENST00000294172 C1orf167Q5SNV9 1468 aa17.49■□□□□ 0.39
NXF1-201ENST00000294172 ATF3P18847 181 aa17.49■□□□□ 0.39
NXF1-201ENST00000294172 FLIIQ13045 1269 aa17.49■□□□□ 0.39
NXF1-201ENST00000294172 RPAP2Q8IXW5 612 aaPredicted RBP17.49■□□□□ 0.39
NXF1-201ENST00000294172 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
NXF1-201ENST00000294172 LRRC37A3O60309 1634 aa17.49■□□□□ 0.39
NXF1-201ENST00000294172 CCT4P50991 539 aaKnown RBP17.48■□□□□ 0.39
NXF1-201ENST00000294172 BMP2KLQ5H9B9 411 aa17.48■□□□□ 0.39
NXF1-201ENST00000294172 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
NXF1-201ENST00000294172 ZNF530Q6P9A1 599 aaPredicted RBP17.48■□□□□ 0.39
NXF1-201ENST00000294172 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
NXF1-201ENST00000294172 ATP10DQ9P241 1426 aa17.47■□□□□ 0.39
NXF1-201ENST00000294172 APBB1O00213 710 aa17.47■□□□□ 0.39
NXF1-201ENST00000294172 DDX17Q92841 729 aaKnown RBP17.47■□□□□ 0.39
NXF1-201ENST00000294172 AXIN2Q9Y2T1 843 aa17.47■□□□□ 0.39
NXF1-201ENST00000294172 ZC3H6P61129 1189 aaKnown RBP17.47■□□□□ 0.39
NXF1-201ENST00000294172 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
NXF1-201ENST00000294172 TMEM94Q12767 1356 aa17.46■□□□□ 0.39
NXF1-201ENST00000294172 HDGFL1Q5TGJ6 251 aa17.46■□□□□ 0.39
NXF1-201ENST00000294172 MPRIPQ6WCQ1 1025 aa17.46■□□□□ 0.39
NXF1-201ENST00000294172 CEMIPQ8WUJ3 1361 aa17.45■□□□□ 0.38
NXF1-201ENST00000294172 TEFQ10587 303 aa17.45■□□□□ 0.38
NXF1-201ENST00000294172 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
NXF1-201ENST00000294172 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
NXF1-201ENST00000294172 EIF2S2P20042 333 aaKnown RBP17.44■□□□□ 0.38
NXF1-201ENST00000294172 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
NXF1-201ENST00000294172 SLIT3O75094 1523 aa17.44■□□□□ 0.38
NXF1-201ENST00000294172 HSPA2P54652 639 aa17.44■□□□□ 0.38
NXF1-201ENST00000294172 C1orf141Q5JVX7 400 aa17.44■□□□□ 0.38
NXF1-201ENST00000294172 SOS1Q07889 1333 aaPredicted RBP17.44■□□□□ 0.38
NXF1-201ENST00000294172 AMOTQ4VCS5 1084 aa17.43■□□□□ 0.38
NXF1-201ENST00000294172 PLEKHM2Q8IWE5 1019 aa17.43■□□□□ 0.38
NXF1-201ENST00000294172 USP35Q9P2H5 1018 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms