RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 DISP2A7MBM2 1401 aa13.55□□□□□ -0.24
CCDC58-201ENST00000291458 PSDA5PKW4 1024 aaPredicted RBP13.54□□□□□ -0.24
CCDC58-201ENST00000291458 FYB1O15117 783 aa13.54□□□□□ -0.24
CCDC58-201ENST00000291458 TNS2Q63HR2 1409 aa13.54□□□□□ -0.24
CCDC58-201ENST00000291458 ANKRD26Q9UPS8 1709 aa13.53□□□□□ -0.24
CCDC58-201ENST00000291458 APBA3O96018 575 aa13.53□□□□□ -0.24
CCDC58-201ENST00000291458 EZH2Q15910 746 aaKnown RBP13.53□□□□□ -0.24
CCDC58-201ENST00000291458 PIP4P2Q8N4L2 257 aa13.53□□□□□ -0.24
CCDC58-201ENST00000291458 CARD14Q9BXL6 1004 aa13.53□□□□□ -0.24
CCDC58-201ENST00000291458 NUP188Q5SRE5 1749 aa13.53□□□□□ -0.24
CCDC58-201ENST00000291458 KAT6BQ8WYB5 2073 aa13.52□□□□□ -0.24
CCDC58-201ENST00000291458 HOXC9P31274 260 aa13.52□□□□□ -0.25
CCDC58-201ENST00000291458 MIER1Q8N108 512 aa13.52□□□□□ -0.25
CCDC58-201ENST00000291458 IP6K1Q92551 441 aa13.52□□□□□ -0.25
CCDC58-201ENST00000291458 RREB1Q92766 1687 aa13.52□□□□□ -0.25
CCDC58-201ENST00000291458 USHBP1Q8N6Y0 703 aa13.51□□□□□ -0.25
CCDC58-201ENST00000291458 MARCH10Q8NA82 808 aaPredicted RBP13.51□□□□□ -0.25
CCDC58-201ENST00000291458 RTL1A6NKG5 1358 aa13.5□□□□□ -0.25
CCDC58-201ENST00000291458 PPM1GO15355 546 aaPredicted RBP13.5□□□□□ -0.25
CCDC58-201ENST00000291458 IL2RBP14784 551 aa13.5□□□□□ -0.25
CCDC58-201ENST00000291458 TNNT2P45379 298 aaPredicted RBP13.5□□□□□ -0.25
CCDC58-201ENST00000291458 PTF1AQ7RTS3 328 aa13.5□□□□□ -0.25
CCDC58-201ENST00000291458 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
CCDC58-201ENST00000291458 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
CCDC58-201ENST00000291458 MAP2P11137 1827 aaKnown RBP13.5□□□□□ -0.25
CCDC58-201ENST00000291458 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
CCDC58-201ENST00000291458 CGNL1Q0VF96 1302 aa13.49□□□□□ -0.25
CCDC58-201ENST00000291458 C11orf95C9JLR9 678 aaPredicted RBP13.49□□□□□ -0.25
CCDC58-201ENST00000291458 EXOC5O00471 708 aa13.49□□□□□ -0.25
CCDC58-201ENST00000291458 ACSBG1Q96GR2 724 aa13.49□□□□□ -0.25
CCDC58-201ENST00000291458 CDCA7Q9BWT1 371 aaPredicted RBP13.49□□□□□ -0.25
CCDC58-201ENST00000291458 EMILIN1Q9Y6C2 1016 aa13.49□□□□□ -0.25
CCDC58-201ENST00000291458 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
CCDC58-201ENST00000291458 NHSQ6T4R5 1651 aa13.48□□□□□ -0.25
CCDC58-201ENST00000291458 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
CCDC58-201ENST00000291458 MEGF6O75095 1541 aa13.48□□□□□ -0.25
CCDC58-201ENST00000291458 DOT1LQ8TEK3 1739 aa13.47□□□□□ -0.25
CCDC58-201ENST00000291458 R3HDM1Q15032 1099 aaKnown RBP13.47□□□□□ -0.25
CCDC58-201ENST00000291458 PANK3Q9H999 370 aa13.47□□□□□ -0.25
CCDC58-201ENST00000291458 FLT4P35916 1363 aa13.46□□□□□ -0.25
CCDC58-201ENST00000291458 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
CCDC58-201ENST00000291458 CAMKK2Q96RR4 588 aa13.46□□□□□ -0.25
CCDC58-201ENST00000291458 BTAF1O14981 1849 aa13.46□□□□□ -0.26
CCDC58-201ENST00000291458 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
CCDC58-201ENST00000291458 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
CCDC58-201ENST00000291458 KIF7Q2M1P5 1343 aa13.45□□□□□ -0.26
CCDC58-201ENST00000291458 CNGB1Q14028 1251 aaPredicted RBP13.45□□□□□ -0.26
CCDC58-201ENST00000291458 DDX54Q8TDD1 881 aaKnown RBP13.45□□□□□ -0.26
CCDC58-201ENST00000291458 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
CCDC58-201ENST00000291458 KCNQ2O43526 872 aa13.43□□□□□ -0.26
CCDC58-201ENST00000291458 NBPF6Q5VWK0 638 aa13.43□□□□□ -0.26
CCDC58-201ENST00000291458 NBPF4Q96M43 638 aa13.43□□□□□ -0.26
CCDC58-201ENST00000291458 INSRP06213 1382 aa13.43□□□□□ -0.26
CCDC58-201ENST00000291458 PARD3Q8TEW0 1356 aa13.43□□□□□ -0.26
CCDC58-201ENST00000291458 BCL11BQ9C0K0 894 aaPredicted RBP13.42□□□□□ -0.26
CCDC58-201ENST00000291458 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
CCDC58-201ENST00000291458 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
CCDC58-201ENST00000291458 LRP5O75197 1615 aa13.41□□□□□ -0.26
CCDC58-201ENST00000291458 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
CCDC58-201ENST00000291458 BCL9O00512 1426 aa13.39□□□□□ -0.27
CCDC58-201ENST00000291458 TATP17735 454 aaPredicted RBP13.39□□□□□ -0.27
CCDC58-201ENST00000291458 MORC1Q86VD1 984 aa13.39□□□□□ -0.27
CCDC58-201ENST00000291458 ANO8Q9HCE9 1232 aaPredicted RBP13.39□□□□□ -0.27
CCDC58-201ENST00000291458 KNSTRNQ9Y448 316 aa13.39□□□□□ -0.27
CCDC58-201ENST00000291458 NSD2O96028 1365 aa13.38□□□□□ -0.27
CCDC58-201ENST00000291458 NBPF14Q5TI25 921 aa13.38□□□□□ -0.27
CCDC58-201ENST00000291458 ZCRB1Q8TBF4 217 aaKnown RBP13.38□□□□□ -0.27
CCDC58-201ENST00000291458 POLKQ9UBT6 870 aa13.38□□□□□ -0.27
CCDC58-201ENST00000291458 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
CCDC58-201ENST00000291458 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
CCDC58-201ENST00000291458 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
CCDC58-201ENST00000291458 MNX1P50219 401 aaPredicted RBP13.36□□□□□ -0.27
CCDC58-201ENST00000291458 CC2D1BQ5T0F9 858 aaKnown RBP13.36□□□□□ -0.27
CCDC58-201ENST00000291458 IFNLR1Q8IU57 520 aaPredicted RBP13.36□□□□□ -0.27
CCDC58-201ENST00000291458 PLSCR1O15162 318 aa13.35□□□□□ -0.27
CCDC58-201ENST00000291458 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
CCDC58-201ENST00000291458 TXNRD1Q16881 649 aa13.35□□□□□ -0.27
CCDC58-201ENST00000291458 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
CCDC58-201ENST00000291458 WASHC2AQ641Q2 1341 aa13.35□□□□□ -0.27
CCDC58-201ENST00000291458 PCDH11XQ9BZA7 1347 aa13.35□□□□□ -0.27
CCDC58-201ENST00000291458 PCDH11YQ9BZA8 1340 aa13.35□□□□□ -0.27
CCDC58-201ENST00000291458 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
CCDC58-201ENST00000291458 KCNQ4P56696 695 aa13.34□□□□□ -0.27
CCDC58-201ENST00000291458 EYA1Q99502 592 aa13.34□□□□□ -0.27
CCDC58-201ENST00000291458 CASZ1Q86V15 1759 aa13.34□□□□□ -0.27
CCDC58-201ENST00000291458 ITGB4P16144 1822 aa13.34□□□□□ -0.27
CCDC58-201ENST00000291458 PAPPAQ13219 1627 aa13.33□□□□□ -0.28
CCDC58-201ENST00000291458 POTEHQ6S545 545 aa13.33□□□□□ -0.28
CCDC58-201ENST00000291458 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
CCDC58-201ENST00000291458 TUBGCP6Q96RT7 1819 aa13.32□□□□□ -0.28
CCDC58-201ENST00000291458 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
CCDC58-201ENST00000291458 STK32BQ9NY57 414 aa13.32□□□□□ -0.28
CCDC58-201ENST00000291458 LY75O60449 1722 aa13.32□□□□□ -0.28
CCDC58-201ENST00000291458 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
CCDC58-201ENST00000291458 PDGFDQ9GZP0 370 aaPredicted RBP13.31□□□□□ -0.28
CCDC58-201ENST00000291458 CYP27B1O15528 508 aa13.3□□□□□ -0.28
CCDC58-201ENST00000291458 ZBTB7AO95365 584 aa13.29□□□□□ -0.28
CCDC58-201ENST00000291458 ZNF827Q17R98 1081 aa13.29□□□□□ -0.28
CCDC58-201ENST00000291458 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
CCDC58-201ENST00000291458 SPG7Q9UQ90 795 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms