RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 MCM4P33991 863 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 CDC42BPAQ5VT25 1732 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 TTC37Q6PGP7 1564 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 PIBF1Q8WXW3 757 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 G3V3G9 751 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 DCAF8Q5TAQ9 597 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 ANKLE2Q86XL3 938 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 DDX17Q92841 729 aaKnown RBP5.77□□□□□ -1.49
UBR1-201ENST00000290650 RSPH6AQ9H0K4 717 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 MAST1Q9Y2H9 1570 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 CPLX1O14810 134 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 IFT57Q9NWB7 429 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 R3HCC1Q9Y3T6 440 aaKnown RBP5.77□□□□□ -1.49
UBR1-201ENST00000290650 CASTP20810 708 aaKnown RBP5.77□□□□□ -1.49
UBR1-201ENST00000290650 CCT4P50991 539 aaKnown RBP5.77□□□□□ -1.49
UBR1-201ENST00000290650 BICDL1Q6ZP65 573 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 JAKMIP1Q96N16 626 aaKnown RBP5.77□□□□□ -1.49
UBR1-201ENST00000290650 MYD88Q99836 296 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 RBM27Q9P2N5 1060 aaKnown RBP5.77□□□□□ -1.49
UBR1-201ENST00000290650 TATP17735 454 aaPredicted RBP5.76□□□□□ -1.49
UBR1-201ENST00000290650 SKOR2Q2VWA4 1001 aaPredicted RBP5.76□□□□□ -1.49
UBR1-201ENST00000290650 RAB11FIP4Q86YS3 637 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 CCAR2Q8N163 923 aaKnown RBP5.76□□□□□ -1.49
UBR1-201ENST00000290650 SAMD9LQ8IVG5 1584 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 NUCB2P80303 420 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 COL17A1Q9UMD9 1497 aaPredicted RBP5.76□□□□□ -1.49
UBR1-201ENST00000290650 UHRF1BP1Q6BDS2 1440 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.76□□□□□ -1.49
UBR1-201ENST00000290650 BECN2A8MW95 431 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 GOLGA6L19H0YKK7 550 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 PHF14O94880 888 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 EIF4A2Q14240 407 aaKnown RBP5.76□□□□□ -1.49
UBR1-201ENST00000290650 OTUD7AQ8TE49 926 aaPredicted RBP5.76□□□□□ -1.49
UBR1-201ENST00000290650 TCEANC2Q96MN5 208 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 CAMK4Q16566 473 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 SLC4A8Q2Y0W8 1093 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 SYCE3A1L190 88 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 PRDM11Q9NQV5 511 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 SPATA31E1Q6ZUB1 1445 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 KDM5CP41229 1560 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 GUCY1B3Q02153 619 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 HDAC5Q9UQL6 1122 aa5.76□□□□□ -1.49
UBR1-201ENST00000290650 CCDC83Q8IWF9 413 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 PI4KAP2A4QPH2 592 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 FLIIQ13045 1269 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 HSP90AA2PQ14568 343 aaPredicted RBP5.75□□□□□ -1.49
UBR1-201ENST00000290650 VSIG10Q8N0Z9 540 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 PI4KAP1Q8N8J0 262 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 CHPF2Q9P2E5 772 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 RABEP1Q15276 862 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 TNPO1Q92973 898 aaKnown RBP5.75□□□□□ -1.49
UBR1-201ENST00000290650 MAP3K2Q9Y2U5 619 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 NINLQ9Y2I6 1382 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 MX1P20591 662 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 PRPF40BQ6NWY9 871 aaKnown RBP5.75□□□□□ -1.49
UBR1-201ENST00000290650 G2E3Q7L622 706 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 CNNM1Q9NRU3 951 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 EIF2AK4Q9P2K8 1649 aaKnown RBP5.75□□□□□ -1.49
UBR1-201ENST00000290650 MAGI2Q86UL8 1455 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 ADAMTS2O95450 1211 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 RNF20Q5VTR2 975 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 GRPEL1Q9HAV7 217 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 ANKRD36BQ8N2N9 1353 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 GPTP24298 496 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 CSPP1Q1MSJ5 1256 aa5.75□□□□□ -1.49
UBR1-201ENST00000290650 PA2G4Q9UQ80 394 aaKnown RBP5.75□□□□□ -1.49
UBR1-201ENST00000290650 MTHFSDQ2M296 383 aaKnown RBP5.74□□□□□ -1.49
UBR1-201ENST00000290650 CHMP4AQ9BY43 222 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 PANK2Q9BZ23 570 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 ABCC1P33527 1531 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 HTATSF1O43719 755 aaKnown RBP5.74□□□□□ -1.49
UBR1-201ENST00000290650 ZBTB3Q9H5J0 574 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 PHF8Q9UPP1 1060 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 ATP7AQ04656 1500 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 NRDCO43847 1150 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 ABCC2Q92887 1545 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 NUP160Q12769 1436 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 DHX16O60231 1041 aaKnown RBP5.74□□□□□ -1.49
UBR1-201ENST00000290650 TTC39AQ5SRH9 613 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 FAM43AQ8N2R8 423 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 ZNF518AQ6AHZ1 1483 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 MEX3CQ5U5Q3 659 aaKnown RBP5.74□□□□□ -1.49
UBR1-201ENST00000290650 CCDC82Q8N4S0 544 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 KDM5AP29375 1690 aaKnown RBP5.74□□□□□ -1.49
UBR1-201ENST00000290650 SDSP20132 328 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 TRDNQ13061 729 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 PPP1R42Q7Z4L9 355 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 TBC1D32Q96NH3 1257 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 LRRC2Q9BYS8 371 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 SNRKQ9NRH2 765 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 TRIM35Q9UPQ4 493 aa5.74□□□□□ -1.49
UBR1-201ENST00000290650 RALYLQ86SE5 291 aaKnown RBP5.73□□□□□ -1.49
UBR1-201ENST00000290650 MRPL50Q8N5N7 158 aaKnown RBP5.73□□□□□ -1.49
UBR1-201ENST00000290650 PHAXQ9H814 394 aaKnown RBP5.73□□□□□ -1.49
UBR1-201ENST00000290650 MRE11P49959 708 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 AKAP17AQ02040 695 aaKnown RBP5.73□□□□□ -1.49
UBR1-201ENST00000290650 HSP90AB4PQ58FF6 505 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 TTLL5Q6EMB2 1281 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 ATP6V1DQ9Y5K8 247 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 KIF1BO60333 1816 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms