RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 MTHFSP49914 203 aa34.08■■■■□ 3.05
PDF-201ENST00000288022 ACSBG1Q96GR2 724 aa34.08■■■■□ 3.05
PDF-201ENST00000288022 SHANK3Q9BYB0 1731 aa34.07■■■■□ 3.05
PDF-201ENST00000288022 EZH2Q15910 746 aaKnown RBP34.07■■■■□ 3.04
PDF-201ENST00000288022 PTF1AQ7RTS3 328 aa34.06■■■■□ 3.04
PDF-201ENST00000288022 CAMKK2Q96RR4 588 aa34.04■■■■□ 3.04
PDF-201ENST00000288022 NHSQ6T4R5 1651 aa34.03■■■■□ 3.04
PDF-201ENST00000288022 KCNQ2O43526 872 aa34.03■■■■□ 3.04
PDF-201ENST00000288022 IGSF1Q8N6C5 1336 aa34.03■■■■□ 3.04
PDF-201ENST00000288022 PCDH11XQ9BZA7 1347 aa34.02■■■■□ 3.04
PDF-201ENST00000288022 PCDH11YQ9BZA8 1340 aa34.02■■■■□ 3.04
PDF-201ENST00000288022 PARD3Q8TEW0 1356 aa34.01■■■■□ 3.04
PDF-201ENST00000288022 PKD1L3Q7Z443 1732 aa33.99■■■■□ 3.03
PDF-201ENST00000288022 SPG7Q9UQ90 795 aa33.98■■■■□ 3.03
PDF-201ENST00000288022 IL13P35225 146 aa33.97■■■■□ 3.03
PDF-201ENST00000288022 DOT1LQ8TEK3 1739 aa33.96■■■■□ 3.03
PDF-201ENST00000288022 KAT6BQ8WYB5 2073 aa33.95■■■■□ 3.03
PDF-201ENST00000288022 PLSCR1O15162 318 aa33.95■■■■□ 3.03
PDF-201ENST00000288022 SYTL4Q96C24 671 aaPredicted RBP33.95■■■■□ 3.03
PDF-201ENST00000288022 RREB1Q92766 1687 aa33.94■■■■□ 3.02
PDF-201ENST00000288022 RGPD3A6NKT7 1758 aaPredicted RBP33.94■■■■□ 3.02
PDF-201ENST00000288022 RGPD4Q7Z3J3 1758 aa33.94■■■■□ 3.02
PDF-201ENST00000288022 DDX10Q13206 875 aaKnown RBP33.94■■■■□ 3.02
PDF-201ENST00000288022 DIAPH1O60610 1272 aaKnown RBP33.93■■■■□ 3.02
PDF-201ENST00000288022 CYP27B1O15528 508 aa33.92■■■■□ 3.02
PDF-201ENST00000288022 SULT6B1Q6IMI4 303 aa33.92■■■■□ 3.02
PDF-201ENST00000288022 AEBP1Q8IUX7 1158 aa33.92■■■■□ 3.02
PDF-201ENST00000288022 BTAF1O14981 1849 aa33.91■■■■□ 3.02
PDF-201ENST00000288022 PRIM1P49642 420 aaKnown RBP33.91■■■■□ 3.02
PDF-201ENST00000288022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.91■■■■□ 3.02
PDF-201ENST00000288022 NUP188Q5SRE5 1749 aa33.9■■■■□ 3.02
PDF-201ENST00000288022 PPP2R1AP30153 589 aa33.88■■■■□ 3.01
PDF-201ENST00000288022 CFAP53Q96M91 514 aa33.88■■■■□ 3.01
PDF-201ENST00000288022 PLEKHG2Q9H7P9 1386 aa33.86■■■■□ 3.01
PDF-201ENST00000288022 COL3A1P02461 1466 aaPredicted RBP33.86■■■■□ 3.01
PDF-201ENST00000288022 PSDA5PKW4 1024 aaPredicted RBP33.85■■■■□ 3.01
PDF-201ENST00000288022 PLEKHO1Q53GL0 409 aaPredicted RBP33.85■■■■□ 3.01
PDF-201ENST00000288022 KDRP35968 1356 aa33.85■■■■□ 3.01
PDF-201ENST00000288022 NBPF14Q5TI25 921 aa33.84■■■■□ 3.01
PDF-201ENST00000288022 IFNL2Q8IZJ0 200 aa33.84■■■■□ 3.01
PDF-201ENST00000288022 U2SURPO15042 1029 aaKnown RBP33.83■■■■□ 3.01
PDF-201ENST00000288022 HMOX1P09601 288 aa33.83■■■■□ 3.01
PDF-201ENST00000288022 TXNRD1Q16881 649 aa33.83■■■■□ 3.01
PDF-201ENST00000288022 PHKG2P15735 406 aa33.82■■■■□ 3
PDF-201ENST00000288022 AMOTQ4VCS5 1084 aa33.82■■■■□ 3
PDF-201ENST00000288022 R3HDM1Q15032 1099 aaKnown RBP33.81■■■■□ 3
PDF-201ENST00000288022 PROM2Q8N271 834 aa33.81■■■■□ 3
PDF-201ENST00000288022 NKX1-1Q15270 411 aaPredicted RBP33.8■■■■□ 3
PDF-201ENST00000288022 ZNF530Q6P9A1 599 aaPredicted RBP33.8■■■■□ 3
PDF-201ENST00000288022 TOGARAM1Q9Y4F4 1720 aa33.79■■■■□ 3
PDF-201ENST00000288022 MPRIPQ6WCQ1 1025 aa33.77■■■■□ 3
PDF-201ENST00000288022 C1orf141Q5JVX7 400 aa33.74■■■□□ 2.99
PDF-201ENST00000288022 NUDCQ9Y266 331 aa33.74■■■□□ 2.99
PDF-201ENST00000288022 ITGB4P16144 1822 aa33.74■■■□□ 2.99
PDF-201ENST00000288022 HSP90AB1P08238 724 aaKnown RBP33.73■■■□□ 2.99
PDF-201ENST00000288022 RALBP1Q15311 655 aa33.7■■■□□ 2.99
PDF-201ENST00000288022 DCAF5Q96JK2 942 aa33.69■■■□□ 2.98
PDF-201ENST00000288022 ANO8Q9HCE9 1232 aaPredicted RBP33.69■■■□□ 2.98
PDF-201ENST00000288022 TMOD3Q9NYL9 352 aa33.69■■■□□ 2.98
PDF-201ENST00000288022 PIGBQ92521 554 aa33.68■■■□□ 2.98
PDF-201ENST00000288022 SLC27A3Q5K4L6 730 aa33.67■■■□□ 2.98
PDF-201ENST00000288022 STK32BQ9NY57 414 aa33.67■■■□□ 2.98
PDF-201ENST00000288022 LY75O60449 1722 aa33.67■■■□□ 2.98
PDF-201ENST00000288022 ZNF316A6NFI3 1004 aaPredicted RBP33.66■■■□□ 2.98
PDF-201ENST00000288022 U2AF1L5P0DN76 240 aaPredicted RBP33.65■■■□□ 2.98
PDF-201ENST00000288022 U2AF1Q01081 240 aaKnown RBP eCLIP33.65■■■□□ 2.98
PDF-201ENST00000288022 LRRC4BQ9NT99 713 aa33.65■■■□□ 2.98
PDF-201ENST00000288022 PALLDQ8WX93 1383 aa33.64■■■□□ 2.98
PDF-201ENST00000288022 KCNQ4P56696 695 aa33.64■■■□□ 2.98
PDF-201ENST00000288022 CCNL1Q9UK58 526 aaPredicted RBP33.64■■■□□ 2.98
PDF-201ENST00000288022 KDM6AO15550 1401 aaPredicted RBP33.63■■■□□ 2.97
PDF-201ENST00000288022 AKAP4Q5JQC9 854 aa33.63■■■□□ 2.97
PDF-201ENST00000288022 SMARCC1Q92922 1105 aaPredicted RBP33.63■■■□□ 2.97
PDF-201ENST00000288022 ERVV-2B6SEH9 535 aa33.62■■■□□ 2.97
PDF-201ENST00000288022 MTHFSDQ2M296 383 aaKnown RBP33.62■■■□□ 2.97
PDF-201ENST00000288022 PAPPAQ13219 1627 aa33.61■■■□□ 2.97
PDF-201ENST00000288022 PRKAR2BP31323 418 aa33.6■■■□□ 2.97
PDF-201ENST00000288022 CABP4P57796 275 aa33.6■■■□□ 2.97
PDF-201ENST00000288022 SLC15A2Q16348 729 aa33.6■■■□□ 2.97
PDF-201ENST00000288022 RSPH6AQ9H0K4 717 aa33.58■■■□□ 2.97
PDF-201ENST00000288022 MYBBP1AQ9BQG0 1328 aaKnown RBP33.57■■■□□ 2.97
PDF-201ENST00000288022 ASAP1Q9ULH1 1129 aa33.56■■■□□ 2.96
PDF-201ENST00000288022 SCN11AQ9UI33 1791 aa33.55■■■□□ 2.96
PDF-201ENST00000288022 GAS2L2Q8NHY3 880 aa33.55■■■□□ 2.96
PDF-201ENST00000288022 ZNF827Q17R98 1081 aa33.54■■■□□ 2.96
PDF-201ENST00000288022 FCHSD2O94868 740 aa33.53■■■□□ 2.96
PDF-201ENST00000288022 PHACTR3Q96KR7 559 aa33.52■■■□□ 2.96
PDF-201ENST00000288022 ATG3Q9NT62 314 aa33.52■■■□□ 2.96
PDF-201ENST00000288022 NFATC2IPQ8NCF5 419 aa33.51■■■□□ 2.95
PDF-201ENST00000288022 LGR6Q9HBX8 967 aa33.51■■■□□ 2.95
PDF-201ENST00000288022 C5P01031 1676 aa33.5■■■□□ 2.95
PDF-201ENST00000288022 RNMTO43148 476 aaKnown RBP33.5■■■□□ 2.95
PDF-201ENST00000288022 AKT1S1Q96B36 256 aa33.5■■■□□ 2.95
PDF-201ENST00000288022 PRKRIP1Q9H875 184 aaPredicted RBP33.5■■■□□ 2.95
PDF-201ENST00000288022 LRP5O75197 1615 aa33.5■■■□□ 2.95
PDF-201ENST00000288022 MAP3K5Q99683 1374 aa33.49■■■□□ 2.95
PDF-201ENST00000288022 VIRMAQ69YN4 1812 aaKnown RBP33.49■■■□□ 2.95
PDF-201ENST00000288022 CASZ1Q86V15 1759 aa33.48■■■□□ 2.95
PDF-201ENST00000288022 LOC102724428A0A0B4J2F2 783 aa33.48■■■□□ 2.95
PDF-201ENST00000288022 SIK1P57059 783 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms