RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 EYA1Q99502 592 aa25.8■■□□□ 1.72
MALSU1-201ENST00000287543 PCDH11XQ9BZA7 1347 aa25.8■■□□□ 1.72
MALSU1-201ENST00000287543 PCDH11YQ9BZA8 1340 aa25.8■■□□□ 1.72
MALSU1-201ENST00000287543 PER1O15534 1290 aaPredicted RBP25.78■■□□□ 1.72
MALSU1-201ENST00000287543 EIF4A2Q14240 407 aaKnown RBP25.78■■□□□ 1.72
MALSU1-201ENST00000287543 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.78■■□□□ 1.72
MALSU1-201ENST00000287543 SPG7Q9UQ90 795 aa25.78■■□□□ 1.72
MALSU1-201ENST00000287543 PRIM1P49642 420 aaKnown RBP25.77■■□□□ 1.72
MALSU1-201ENST00000287543 SYTL4Q96C24 671 aaPredicted RBP25.77■■□□□ 1.72
MALSU1-201ENST00000287543 NCAPD2Q15021 1401 aa25.77■■□□□ 1.72
MALSU1-201ENST00000287543 PLEKHG2Q9H7P9 1386 aa25.74■■□□□ 1.71
MALSU1-201ENST00000287543 STK32BQ9NY57 414 aa25.74■■□□□ 1.71
MALSU1-201ENST00000287543 RGPD3A6NKT7 1758 aaPredicted RBP25.74■■□□□ 1.71
MALSU1-201ENST00000287543 RGPD4Q7Z3J3 1758 aa25.74■■□□□ 1.71
MALSU1-201ENST00000287543 SBF2Q86WG5 1849 aa25.73■■□□□ 1.71
MALSU1-201ENST00000287543 SLC27A3Q5K4L6 730 aa25.73■■□□□ 1.71
MALSU1-201ENST00000287543 RREB1Q92766 1687 aa25.73■■□□□ 1.71
MALSU1-201ENST00000287543 HMGB2P26583 209 aaKnown RBP25.72■■□□□ 1.71
MALSU1-201ENST00000287543 NPC1L1Q9UHC9 1359 aa25.71■■□□□ 1.71
MALSU1-201ENST00000287543 NHSQ6T4R5 1651 aa25.71■■□□□ 1.71
MALSU1-201ENST00000287543 ANKRD26Q9UPS8 1709 aa25.71■■□□□ 1.71
MALSU1-201ENST00000287543 IGSF1Q8N6C5 1336 aa25.7■■□□□ 1.71
MALSU1-201ENST00000287543 CYP27B1O15528 508 aa25.7■■□□□ 1.7
MALSU1-201ENST00000287543 ANO8Q9HCE9 1232 aaPredicted RBP25.7■■□□□ 1.7
MALSU1-201ENST00000287543 NKX1-1Q15270 411 aaPredicted RBP25.69■■□□□ 1.7
MALSU1-201ENST00000287543 SLC15A2Q16348 729 aa25.69■■□□□ 1.7
MALSU1-201ENST00000287543 CC2D1BQ5T0F9 858 aaKnown RBP25.68■■□□□ 1.7
MALSU1-201ENST00000287543 NUP188Q5SRE5 1749 aa25.67■■□□□ 1.7
MALSU1-201ENST00000287543 IFNL2Q8IZJ0 200 aa25.67■■□□□ 1.7
MALSU1-201ENST00000287543 SPON1Q9HCB6 807 aa25.66■■□□□ 1.7
MALSU1-201ENST00000287543 MTHFSP49914 203 aa25.65■■□□□ 1.7
MALSU1-201ENST00000287543 AMOTQ4VCS5 1084 aa25.65■■□□□ 1.7
MALSU1-201ENST00000287543 PLEKHO1Q53GL0 409 aaPredicted RBP25.65■■□□□ 1.7
MALSU1-201ENST00000287543 RGPD2P0DJD1 1756 aa25.64■■□□□ 1.69
MALSU1-201ENST00000287543 MAP2P11137 1827 aaKnown RBP25.63■■□□□ 1.69
MALSU1-201ENST00000287543 IL13P35225 146 aa25.63■■□□□ 1.69
MALSU1-201ENST00000287543 LRP5O75197 1615 aa25.63■■□□□ 1.69
MALSU1-201ENST00000287543 HSP90AB1P08238 724 aaKnown RBP25.62■■□□□ 1.69
MALSU1-201ENST00000287543 PHKG2P15735 406 aa25.62■■□□□ 1.69
MALSU1-201ENST00000287543 MPRIPQ6WCQ1 1025 aa25.62■■□□□ 1.69
MALSU1-201ENST00000287543 SMARCC1Q92922 1105 aaPredicted RBP25.62■■□□□ 1.69
MALSU1-201ENST00000287543 LRRC4BQ9NT99 713 aa25.62■■□□□ 1.69
MALSU1-201ENST00000287543 SULT6B1Q6IMI4 303 aa25.6■■□□□ 1.69
MALSU1-201ENST00000287543 CCNL1Q9UK58 526 aaPredicted RBP25.59■■□□□ 1.69
MALSU1-201ENST00000287543 SRCAPQ6ZRS2 3230 aa25.59■■□□□ 1.69
MALSU1-201ENST00000287543 DIAPH1O60610 1272 aaKnown RBP25.57■■□□□ 1.68
MALSU1-201ENST00000287543 AKT1S1Q96B36 256 aa25.57■■□□□ 1.68
MALSU1-201ENST00000287543 TMOD3Q9NYL9 352 aa25.56■■□□□ 1.68
MALSU1-201ENST00000287543 PPP1R1BQ9UD71 204 aaPredicted RBP25.56■■□□□ 1.68
MALSU1-201ENST00000287543 BTAF1O14981 1849 aa25.56■■□□□ 1.68
MALSU1-201ENST00000287543 KDRP35968 1356 aa25.56■■□□□ 1.68
MALSU1-201ENST00000287543 SHANK3Q9BYB0 1731 aa25.55■■□□□ 1.68
MALSU1-201ENST00000287543 PIGBQ92521 554 aa25.55■■□□□ 1.68
MALSU1-201ENST00000287543 DCAF5Q96JK2 942 aa25.55■■□□□ 1.68
MALSU1-201ENST00000287543 ERVV-2B6SEH9 535 aa25.54■■□□□ 1.68
MALSU1-201ENST00000287543 C1orf141Q5JVX7 400 aa25.54■■□□□ 1.68
MALSU1-201ENST00000287543 ZNF530Q6P9A1 599 aaPredicted RBP25.54■■□□□ 1.68
MALSU1-201ENST00000287543 AEBP1Q8IUX7 1158 aa25.54■■□□□ 1.68
MALSU1-201ENST00000287543 PALLDQ8WX93 1383 aa25.54■■□□□ 1.68
MALSU1-201ENST00000287543 CNGB1Q14028 1251 aaPredicted RBP25.53■■□□□ 1.68
MALSU1-201ENST00000287543 ZNF827Q17R98 1081 aa25.53■■□□□ 1.68
MALSU1-201ENST00000287543 MTFR1LQ9H019 292 aa25.53■■□□□ 1.68
MALSU1-201ENST00000287543 TFCP2L1Q9NZI6 479 aa25.53■■□□□ 1.68
MALSU1-201ENST00000287543 PKD1L3Q7Z443 1732 aa25.53■■□□□ 1.68
MALSU1-201ENST00000287543 ZBTB7AO95365 584 aa25.52■■□□□ 1.68
MALSU1-201ENST00000287543 SLC16A10Q8TF71 515 aa25.52■■□□□ 1.68
MALSU1-201ENST00000287543 DOT1LQ8TEK3 1739 aa25.51■■□□□ 1.68
MALSU1-201ENST00000287543 CFAP53Q96M91 514 aa25.51■■□□□ 1.67
MALSU1-201ENST00000287543 PDGFDQ9GZP0 370 aaPredicted RBP25.51■■□□□ 1.67
MALSU1-201ENST00000287543 KCNQ4P56696 695 aa25.49■■□□□ 1.67
MALSU1-201ENST00000287543 ATF5Q9Y2D1 282 aaPredicted RBP25.48■■□□□ 1.67
MALSU1-201ENST00000287543 PAPPAQ13219 1627 aa25.47■■□□□ 1.67
MALSU1-201ENST00000287543 CABP4P57796 275 aa25.46■■□□□ 1.67
MALSU1-201ENST00000287543 AKAP4Q5JQC9 854 aa25.46■■□□□ 1.67
MALSU1-201ENST00000287543 FLAD1Q8NFF5 587 aa25.46■■□□□ 1.67
MALSU1-201ENST00000287543 LOC102724428A0A0B4J2F2 783 aa25.45■■□□□ 1.66
MALSU1-201ENST00000287543 HMOX1P09601 288 aa25.45■■□□□ 1.66
MALSU1-201ENST00000287543 SIK1P57059 783 aa25.45■■□□□ 1.66
MALSU1-201ENST00000287543 PTGER2P43116 358 aa25.44■■□□□ 1.66
MALSU1-201ENST00000287543 ASAP1Q9ULH1 1129 aa25.44■■□□□ 1.66
MALSU1-201ENST00000287543 NUDCQ9Y266 331 aa25.44■■□□□ 1.66
MALSU1-201ENST00000287543 KAT6BQ8WYB5 2073 aa25.44■■□□□ 1.66
MALSU1-201ENST00000287543 PNPLA7Q6ZV29 1317 aa25.43■■□□□ 1.66
MALSU1-201ENST00000287543 U2SURPO15042 1029 aaKnown RBP25.43■■□□□ 1.66
MALSU1-201ENST00000287543 ATG3Q9NT62 314 aa25.43■■□□□ 1.66
MALSU1-201ENST00000287543 PPP2R1AP30153 589 aa25.41■■□□□ 1.66
MALSU1-201ENST00000287543 CASZ1Q86V15 1759 aa25.41■■□□□ 1.66
MALSU1-201ENST00000287543 AK7Q96M32 723 aa25.4■■□□□ 1.66
MALSU1-201ENST00000287543 DCAF8L1A6NGE4 600 aa25.39■■□□□ 1.66
MALSU1-201ENST00000287543 POLD1P28340 1107 aa25.39■■□□□ 1.66
MALSU1-201ENST00000287543 ATP6V1AP38606 617 aa25.39■■□□□ 1.66
MALSU1-201ENST00000287543 SGIP1Q9BQI5 828 aa25.39■■□□□ 1.66
MALSU1-201ENST00000287543 LY75O60449 1722 aa25.39■■□□□ 1.65
MALSU1-201ENST00000287543 MSH5O43196 834 aa25.38■■□□□ 1.65
MALSU1-201ENST00000287543 ARXQ96QS3 562 aa25.38■■□□□ 1.65
MALSU1-201ENST00000287543 KDM6AO15550 1401 aaPredicted RBP25.37■■□□□ 1.65
MALSU1-201ENST00000287543 MTHFSDQ2M296 383 aaKnown RBP25.37■■□□□ 1.65
MALSU1-201ENST00000287543 NFATC2IPQ8NCF5 419 aa25.37■■□□□ 1.65
MALSU1-201ENST00000287543 COL3A1P02461 1466 aaPredicted RBP25.36■■□□□ 1.65
MALSU1-201ENST00000287543 COL23A1Q86Y22 540 aaPredicted RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms