RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 DDX19BQ9UMR2 479 aa24.21■■□□□ 1.47
VBP1-201ENST00000286428 AMOTQ4VCS5 1084 aa24.2■■□□□ 1.46
VBP1-201ENST00000286428 KDM2BQ8NHM5 1336 aa24.19■■□□□ 1.46
VBP1-201ENST00000286428 TNS3Q68CZ2 1445 aa24.19■■□□□ 1.46
VBP1-201ENST00000286428 ZNF335Q9H4Z2 1342 aaPredicted RBP24.19■■□□□ 1.46
VBP1-201ENST00000286428 TRIM27P14373 513 aa24.18■■□□□ 1.46
VBP1-201ENST00000286428 SLAIN2Q9P270 581 aa24.18■■□□□ 1.46
VBP1-201ENST00000286428 SPATA31A3Q5VYP0 1347 aa24.18■■□□□ 1.46
VBP1-201ENST00000286428 CRB1P82279 1406 aa24.18■■□□□ 1.46
VBP1-201ENST00000286428 PLEKHO1Q53GL0 409 aaPredicted RBP24.18■■□□□ 1.46
VBP1-201ENST00000286428 NBPF6Q5VWK0 638 aa24.18■■□□□ 1.46
VBP1-201ENST00000286428 ANKRD24Q8TF21 1146 aa24.18■■□□□ 1.46
VBP1-201ENST00000286428 NBPF4Q96M43 638 aa24.18■■□□□ 1.46
VBP1-201ENST00000286428 MAP3K5Q99683 1374 aa24.17■■□□□ 1.46
VBP1-201ENST00000286428 ALS2Q96Q42 1657 aa24.17■■□□□ 1.46
VBP1-201ENST00000286428 SOS1Q07889 1333 aaPredicted RBP24.16■■□□□ 1.46
VBP1-201ENST00000286428 BRINP3Q76B58 766 aa24.16■■□□□ 1.46
VBP1-201ENST00000286428 MRPL50Q8N5N7 158 aaKnown RBP24.16■■□□□ 1.46
VBP1-201ENST00000286428 TSPYL4Q9UJ04 414 aa24.15■■□□□ 1.46
VBP1-201ENST00000286428 RLBP1P12271 317 aa24.15■■□□□ 1.46
VBP1-201ENST00000286428 TSPYL6Q8N831 410 aa24.15■■□□□ 1.46
VBP1-201ENST00000286428 C8orf58Q8NAV2 365 aa24.15■■□□□ 1.46
VBP1-201ENST00000286428 RBM19Q9Y4C8 960 aaKnown RBP24.15■■□□□ 1.46
VBP1-201ENST00000286428 API5Q9BZZ5 524 aaKnown RBP24.14■■□□□ 1.45
VBP1-201ENST00000286428 CHMP4AQ9BY43 222 aa24.13■■□□□ 1.45
VBP1-201ENST00000286428 PXDNQ92626 1479 aa24.13■■□□□ 1.45
VBP1-201ENST00000286428 ELL2O00472 640 aaPredicted RBP24.12■■□□□ 1.45
VBP1-201ENST00000286428 RWDD1Q9H446 243 aaPredicted RBP24.12■■□□□ 1.45
VBP1-201ENST00000286428 NCAPD2Q15021 1401 aa24.12■■□□□ 1.45
VBP1-201ENST00000286428 ZC3H6P61129 1189 aaKnown RBP24.11■■□□□ 1.45
VBP1-201ENST00000286428 ABCC6O95255 1503 aa24.11■■□□□ 1.45
VBP1-201ENST00000286428 TAF7Q15545 349 aaPredicted RBP24.11■■□□□ 1.45
VBP1-201ENST00000286428 ITPRIPQ8IWB1 547 aa24.11■■□□□ 1.45
VBP1-201ENST00000286428 USHBP1Q8N6Y0 703 aa24.11■■□□□ 1.45
VBP1-201ENST00000286428 PLEKHG2Q9H7P9 1386 aa24.1■■□□□ 1.45
VBP1-201ENST00000286428 AKAP4Q5JQC9 854 aa24.1■■□□□ 1.45
VBP1-201ENST00000286428 ERBB3P21860 1342 aa24.1■■□□□ 1.45
VBP1-201ENST00000286428 PLEKHG5O94827 1062 aa24.09■■□□□ 1.45
VBP1-201ENST00000286428 DDX17Q92841 729 aaKnown RBP24.09■■□□□ 1.45
VBP1-201ENST00000286428 SOS2Q07890 1332 aaPredicted RBP24.09■■□□□ 1.45
VBP1-201ENST00000286428 XIRP1Q702N8 1843 aaKnown RBP24.09■■□□□ 1.45
VBP1-201ENST00000286428 MED1Q15648 1581 aaPredicted RBP24.09■■□□□ 1.45
VBP1-201ENST00000286428 CPDO75976 1380 aa24.08■■□□□ 1.45
VBP1-201ENST00000286428 C1orf141Q5JVX7 400 aa24.08■■□□□ 1.44
VBP1-201ENST00000286428 LRRC59Q96AG4 307 aaKnown RBP24.08■■□□□ 1.44
VBP1-201ENST00000286428 TNNQ9UQP3 1299 aa24.07■■□□□ 1.44
VBP1-201ENST00000286428 AXIN2Q9Y2T1 843 aa24.07■■□□□ 1.44
VBP1-201ENST00000286428 PTPRCP08575 1304 aa24.06■■□□□ 1.44
VBP1-201ENST00000286428 TMEM57Q8N5G2 664 aa24.06■■□□□ 1.44
VBP1-201ENST00000286428 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
VBP1-201ENST00000286428 ZNF530Q6P9A1 599 aaPredicted RBP24.05■■□□□ 1.44
VBP1-201ENST00000286428 CEMIPQ8WUJ3 1361 aa24.04■■□□□ 1.44
VBP1-201ENST00000286428 RAPGEF4Q8WZA2 1011 aa24.04■■□□□ 1.44
VBP1-201ENST00000286428 IGHDP01880 384 aa24.02■■□□□ 1.44
VBP1-201ENST00000286428 CSB-PGBD3P0DP91 1061 aa24.02■■□□□ 1.44
VBP1-201ENST00000286428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.02■■□□□ 1.44
VBP1-201ENST00000286428 ABCC4O15439 1325 aa24.02■■□□□ 1.44
VBP1-201ENST00000286428 TEFQ10587 303 aa24.02■■□□□ 1.44
VBP1-201ENST00000286428 CCDC30Q5VVM6 783 aa24.02■■□□□ 1.44
VBP1-201ENST00000286428 STK31Q9BXU1 1019 aa24.02■■□□□ 1.44
VBP1-201ENST00000286428 LRRC37A3O60309 1634 aa24.02■■□□□ 1.43
VBP1-201ENST00000286428 OVOS2A0A0G2JMS6 1433 aa24.01■■□□□ 1.43
VBP1-201ENST00000286428 CAMTA1Q9Y6Y1 1673 aa24.01■■□□□ 1.43
VBP1-201ENST00000286428 TATP17735 454 aaPredicted RBP24.01■■□□□ 1.43
VBP1-201ENST00000286428 ZBTB40Q9NUA8 1239 aa24.01■■□□□ 1.43
VBP1-201ENST00000286428 NLRP2Q9NX02 1062 aa24.01■■□□□ 1.43
VBP1-201ENST00000286428 MIS18AQ9NYP9 233 aa24.01■■□□□ 1.43
VBP1-201ENST00000286428 PCDHB15Q9Y5E8 787 aa24.01■■□□□ 1.43
VBP1-201ENST00000286428 HDAC1Q13547 482 aaPredicted RBP24■■□□□ 1.43
VBP1-201ENST00000286428 CABLES1Q8TDN4 633 aa23.99■■□□□ 1.43
VBP1-201ENST00000286428 SPG7Q9UQ90 795 aa23.99■■□□□ 1.43
VBP1-201ENST00000286428 HOXB7P09629 217 aa23.98■■□□□ 1.43
VBP1-201ENST00000286428 SLC4A2P04920 1241 aa23.97■■□□□ 1.43
VBP1-201ENST00000286428 ZBTB7BO15156 539 aaPredicted RBP23.96■■□□□ 1.43
VBP1-201ENST00000286428 KRT24Q2M2I5 525 aa23.96■■□□□ 1.43
VBP1-201ENST00000286428 RNMTO43148 476 aaKnown RBP23.95■■□□□ 1.43
VBP1-201ENST00000286428 PRDM11Q9NQV5 511 aa23.95■■□□□ 1.43
VBP1-201ENST00000286428 FAM208AQ9UK61 1670 aaKnown RBP23.95■■□□□ 1.42
VBP1-201ENST00000286428 INTS3Q68E01 1043 aaKnown RBP23.95■■□□□ 1.42
VBP1-201ENST00000286428 LMO7Q8WWI1 1683 aa23.94■■□□□ 1.42
VBP1-201ENST00000286428 BTBD11A6QL63 1104 aa23.93■■□□□ 1.42
VBP1-201ENST00000286428 HSP90AB1P08238 724 aaKnown RBP23.92■■□□□ 1.42
VBP1-201ENST00000286428 PDE4AP27815 886 aa23.92■■□□□ 1.42
VBP1-201ENST00000286428 CHRNA2Q15822 529 aa23.92■■□□□ 1.42
VBP1-201ENST00000286428 LGR6Q9HBX8 967 aa23.92■■□□□ 1.42
VBP1-201ENST00000286428 COL18A1P39060 1754 aa23.92■■□□□ 1.42
VBP1-201ENST00000286428 CRYBG1Q9Y4K1 1723 aa23.91■■□□□ 1.42
VBP1-201ENST00000286428 RGPD2P0DJD1 1756 aa23.91■■□□□ 1.42
VBP1-201ENST00000286428 MPRIPQ6WCQ1 1025 aa23.91■■□□□ 1.42
VBP1-201ENST00000286428 IFNL2Q8IZJ0 200 aa23.9■■□□□ 1.42
VBP1-201ENST00000286428 BACH2Q9BYV9 841 aa23.9■■□□□ 1.42
VBP1-201ENST00000286428 CCT4P50991 539 aaKnown RBP23.89■■□□□ 1.42
VBP1-201ENST00000286428 EIF4A1P60842 406 aaKnown RBP23.89■■□□□ 1.41
VBP1-201ENST00000286428 RGS3P49796 1198 aa23.88■■□□□ 1.41
VBP1-201ENST00000286428 WDR17Q8IZU2 1322 aa23.88■■□□□ 1.41
VBP1-201ENST00000286428 NHSL1Q5SYE7 1610 aa23.87■■□□□ 1.41
VBP1-201ENST00000286428 HDGFL1Q5TGJ6 251 aa23.87■■□□□ 1.41
VBP1-201ENST00000286428 FAM161AQ3B820 660 aa23.86■■□□□ 1.41
VBP1-201ENST00000286428 GCC1Q96CN9 775 aa23.86■■□□□ 1.41
VBP1-201ENST00000286428 RGPD5Q99666 1765 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms