RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 BMP2KQ9NSY1 1161 aaPredicted RBP10.62□□□□□ -0.71
SMC2-201ENST00000286398 CCDC18Q5T9S5 1454 aa10.62□□□□□ -0.71
SMC2-201ENST00000286398 SLC3A2P08195 630 aaKnown RBP10.62□□□□□ -0.71
SMC2-201ENST00000286398 POTEB2H3BUK9 544 aa10.62□□□□□ -0.71
SMC2-201ENST00000286398 CTR9Q6PD62 1173 aa10.62□□□□□ -0.71
SMC2-201ENST00000286398 SSBP05455 408 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMC2-201ENST00000286398 GSTTP1A0A1W2PQM5 241 aa10.61□□□□□ -0.71
SMC2-201ENST00000286398 CDKL5O76039 1030 aa10.61□□□□□ -0.71
SMC2-201ENST00000286398 SYTL4Q96C24 671 aaPredicted RBP10.61□□□□□ -0.71
SMC2-201ENST00000286398 SSR1P43307 286 aaKnown RBP10.61□□□□□ -0.71
SMC2-201ENST00000286398 UBE4AQ14139 1066 aa10.61□□□□□ -0.71
SMC2-201ENST00000286398 MVPQ14764 893 aaKnown RBP10.61□□□□□ -0.71
SMC2-201ENST00000286398 CCDC83Q8IWF9 413 aa10.61□□□□□ -0.71
SMC2-201ENST00000286398 SPECC1LQ69YQ0 1117 aa10.61□□□□□ -0.71
SMC2-201ENST00000286398 ATF7IPQ6VMQ6 1270 aa10.61□□□□□ -0.71
SMC2-201ENST00000286398 SCAND2PQ9GZW5 306 aaPredicted RBP10.61□□□□□ -0.71
SMC2-201ENST00000286398 GCOM1H8Y6P7 765 aaPredicted RBP10.6□□□□□ -0.71
SMC2-201ENST00000286398 STAMBPO95630 424 aa10.6□□□□□ -0.71
SMC2-201ENST00000286398 MYZAPP0CAP1 466 aa10.6□□□□□ -0.71
SMC2-201ENST00000286398 CETN2P41208 172 aa10.6□□□□□ -0.71
SMC2-201ENST00000286398 SEPT6Q14141 434 aa10.6□□□□□ -0.71
SMC2-201ENST00000286398 TSR2Q969E8 191 aaKnown RBP10.6□□□□□ -0.71
SMC2-201ENST00000286398 SRCIN1Q9C0H9 1055 aa10.6□□□□□ -0.71
SMC2-201ENST00000286398 CCDC69A6NI79 296 aa10.6□□□□□ -0.71
SMC2-201ENST00000286398 MAP4K4O95819 1239 aaPredicted RBP10.6□□□□□ -0.71
SMC2-201ENST00000286398 CLCN1P35523 988 aa10.6□□□□□ -0.71
SMC2-201ENST00000286398 NUP133Q8WUM0 1156 aa10.6□□□□□ -0.71
SMC2-201ENST00000286398 HLTFQ14527 1009 aaKnown RBP eCLIP10.6□□□□□ -0.719e-7■■□□□ 14.2
SMC2-201ENST00000286398 DAAM2Q86T65 1068 aa10.6□□□□□ -0.71
SMC2-201ENST00000286398 PPM1EQ8WY54 764 aa10.6□□□□□ -0.71
SMC2-201ENST00000286398 SERPINA10Q9UK55 444 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 CCDC160A6NGH7 325 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 GSDMDP57764 484 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 KRT32Q14532 448 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 CCDC57Q2TAC2 916 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 WWC2Q6AWC2 1192 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 RAPGEF4Q8WZA2 1011 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 SSFA2P28290 1259 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 PPP2R1AP30153 589 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 KLHL10Q6JEL2 608 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 GIGYF2Q6Y7W6 1299 aaKnown RBP10.59□□□□□ -0.71
SMC2-201ENST00000286398 CFAP57Q96MR6 1250 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 GOPCQ9HD26 462 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 ATP2C2O75185 946 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 ADCY5O95622 1261 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 DNA2P51530 1060 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 CCDC158Q5M9N0 1113 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 FHOD3Q2V2M9 1422 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 TMCO5BA8MYB1 307 aa10.59□□□□□ -0.71
SMC2-201ENST00000286398 SNW1Q13573 536 aaKnown RBP10.59□□□□□ -0.71
SMC2-201ENST00000286398 TNPO1Q92973 898 aaKnown RBP10.59□□□□□ -0.71
SMC2-201ENST00000286398 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMC2-201ENST00000286398 HSPA4P34932 840 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 SOGA3Q5TF21 947 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 NACAP1Q9BZK3 213 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 CCDC88BA6NC98 1476 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 IVLP07476 585 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 PRKAR2BP31323 418 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 CWC27Q6UX04 472 aaKnown RBP10.58□□□□□ -0.72
SMC2-201ENST00000286398 WDR66Q8TBY9 1149 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 FBF1Q8TES7 1133 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 TMX1Q9H3N1 280 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 CCDC178Q5BJE1 867 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 CKAP2LQ8IYA6 745 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 RSPH14Q9UHP6 348 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 PAXBP1Q9Y5B6 917 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 USO1O60763 962 aaKnown RBP10.58□□□□□ -0.72
SMC2-201ENST00000286398 CCT4P50991 539 aaKnown RBP10.58□□□□□ -0.72
SMC2-201ENST00000286398 SARNPP82979 210 aaKnown RBP10.58□□□□□ -0.72
SMC2-201ENST00000286398 CPSF2Q9P2I0 782 aaKnown RBP10.58□□□□□ -0.72
SMC2-201ENST00000286398 SLC4A2P04920 1241 aa10.58□□□□□ -0.72
SMC2-201ENST00000286398 PUS7Q96PZ0 661 aaKnown RBP10.58□□□□□ -0.72
SMC2-201ENST00000286398 NAA15Q9BXJ9 866 aaKnown RBP10.58□□□□□ -0.72
SMC2-201ENST00000286398 SMG6Q86US8 1419 aaKnown RBP10.57□□□□□ -0.72
SMC2-201ENST00000286398 TTC39AQ5SRH9 613 aa10.57□□□□□ -0.72
SMC2-201ENST00000286398 TRHP20396 242 aaPredicted RBP10.57□□□□□ -0.72
SMC2-201ENST00000286398 CASTP20810 708 aaKnown RBP10.57□□□□□ -0.72
SMC2-201ENST00000286398 CEP135Q66GS9 1140 aa10.57□□□□□ -0.72
SMC2-201ENST00000286398 ARID4AP29374 1257 aaPredicted RBP10.57□□□□□ -0.72
SMC2-201ENST00000286398 CACNA2D4Q7Z3S7 1137 aa10.57□□□□□ -0.72
SMC2-201ENST00000286398 CPLX3Q8WVH0 158 aa10.57□□□□□ -0.72
SMC2-201ENST00000286398 TBC1D2Q9BYX2 928 aa10.57□□□□□ -0.72
SMC2-201ENST00000286398 ZSWIM4Q9H7M6 989 aa10.57□□□□□ -0.72
SMC2-201ENST00000286398 FKBP15Q5T1M5 1219 aa10.57□□□□□ -0.72
SMC2-201ENST00000286398 GOLGA6L9A6NEM1 432 aa10.56□□□□□ -0.72
SMC2-201ENST00000286398 CTAGE5O15320 804 aa10.56□□□□□ -0.72
SMC2-201ENST00000286398 MAATS1Q7Z4T9 603 aa10.56□□□□□ -0.72
SMC2-201ENST00000286398 PNISRQ8TF01 805 aaKnown RBP10.56□□□□□ -0.72
SMC2-201ENST00000286398 C6orf163Q5TEZ5 329 aa10.56□□□□□ -0.72
SMC2-201ENST00000286398 GTPBP4Q9BZE4 634 aaKnown RBP10.56□□□□□ -0.72
SMC2-201ENST00000286398 SIL1Q9H173 461 aa10.56□□□□□ -0.72
SMC2-201ENST00000286398 ARFGAP3Q9NP61 516 aa10.56□□□□□ -0.72
SMC2-201ENST00000286398 CTNNA3Q9UI47 895 aa10.56□□□□□ -0.72
SMC2-201ENST00000286398 TMC6Q7Z403 805 aa10.56□□□□□ -0.72
SMC2-201ENST00000286398 VPS36Q86VN1 386 aa10.56□□□□□ -0.72
SMC2-201ENST00000286398 CEP57Q86XR8 500 aa10.56□□□□□ -0.72
SMC2-201ENST00000286398 CEP131Q9UPN4 1083 aa10.56□□□□□ -0.72
SMC2-201ENST00000286398 DESP17661 470 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 GNG11P61952 73 aa10.55□□□□□ -0.72
SMC2-201ENST00000286398 HOOK3Q86VS8 718 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms