RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 PXDNQ92626 1479 aa12.66□□□□□ -0.38
PPP4R1-201ENST00000285124 MYT1Q01538 1121 aa12.66□□□□□ -0.38
PPP4R1-201ENST00000285124 CRBNQ96SW2 442 aa12.66□□□□□ -0.38
PPP4R1-201ENST00000285124 TATP17735 454 aaPredicted RBP12.66□□□□□ -0.38
PPP4R1-201ENST00000285124 C8orf37Q96NL8 207 aa12.66□□□□□ -0.38
PPP4R1-201ENST00000285124 GNAI1P63096 354 aa12.65□□□□□ -0.38
PPP4R1-201ENST00000285124 RARSP54136 660 aaKnown RBP12.65□□□□□ -0.38
PPP4R1-201ENST00000285124 BCL11AQ9H165 835 aa12.65□□□□□ -0.38
PPP4R1-201ENST00000285124 TEFQ10587 303 aa12.65□□□□□ -0.39
PPP4R1-201ENST00000285124 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.39
PPP4R1-201ENST00000285124 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
PPP4R1-201ENST00000285124 COG6Q9Y2V7 657 aa12.64□□□□□ -0.39
PPP4R1-201ENST00000285124 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
PPP4R1-201ENST00000285124 KCNQ3O43525 872 aa12.64□□□□□ -0.39
PPP4R1-201ENST00000285124 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-201ENST00000285124 TWISTNBQ3B726 338 aaPredicted RBP12.63□□□□□ -0.39
PPP4R1-201ENST00000285124 NGLY1Q96IV0 654 aa12.63□□□□□ -0.39
PPP4R1-201ENST00000285124 CCDC136Q96JN2 1154 aa12.63□□□□□ -0.39
PPP4R1-201ENST00000285124 IQSEC2Q5JU85 1478 aa12.63□□□□□ -0.39
PPP4R1-201ENST00000285124 CALD1Q05682 793 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-201ENST00000285124 SLC39A6Q13433 755 aa12.63□□□□□ -0.39
PPP4R1-201ENST00000285124 ZNF428Q96B54 188 aa12.63□□□□□ -0.39
PPP4R1-201ENST00000285124 NFAT5O94916 1531 aa12.63□□□□□ -0.39
PPP4R1-201ENST00000285124 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
PPP4R1-201ENST00000285124 RTL1A6NKG5 1358 aa12.62□□□□□ -0.39
PPP4R1-201ENST00000285124 HSPA1LP34931 641 aa12.61□□□□□ -0.39
PPP4R1-201ENST00000285124 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-201ENST00000285124 IFT57Q9NWB7 429 aa12.61□□□□□ -0.39
PPP4R1-201ENST00000285124 NOB1Q9ULX3 412 aaKnown RBP12.61□□□□□ -0.39
PPP4R1-201ENST00000285124 KDRP35968 1356 aa12.61□□□□□ -0.39
PPP4R1-201ENST00000285124 SYTL4Q96C24 671 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-201ENST00000285124 NFATC2IPQ8NCF5 419 aa12.6□□□□□ -0.39
PPP4R1-201ENST00000285124 KIF24Q5T7B8 1368 aa12.6□□□□□ -0.39
PPP4R1-201ENST00000285124 VAMP4O75379 141 aa12.6□□□□□ -0.39
PPP4R1-201ENST00000285124 FTSJ3Q8IY81 847 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-201ENST00000285124 BTBD11A6QL63 1104 aa12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 RLBP1P12271 317 aa12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 TAF7Q15545 349 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 AMOTQ4VCS5 1084 aa12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 MEX3CQ5U5Q3 659 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 KIF1AQ12756 1690 aa12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 WDR17Q8IZU2 1322 aa12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 CHL1O00533 1208 aa12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 CYP27B1O15528 508 aa12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 ANXA1P04083 346 aa12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 PPP4R2Q9NY27 417 aa12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 SPG7Q9UQ90 795 aa12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 KAT6BQ8WYB5 2073 aa12.59□□□□□ -0.39
PPP4R1-201ENST00000285124 AKAP4Q5JQC9 854 aa12.58□□□□□ -0.39
PPP4R1-201ENST00000285124 MAP3K5Q99683 1374 aa12.58□□□□□ -0.4
PPP4R1-201ENST00000285124 SKAP1Q86WV1 359 aa12.58□□□□□ -0.4
PPP4R1-201ENST00000285124 ZCRB1Q8TBF4 217 aaKnown RBP12.58□□□□□ -0.4
PPP4R1-201ENST00000285124 RNMTO43148 476 aaKnown RBP12.58□□□□□ -0.4
PPP4R1-201ENST00000285124 ZNF853P0CG23 659 aa12.58□□□□□ -0.4
PPP4R1-201ENST00000285124 IL2RBP14784 551 aa12.58□□□□□ -0.4
PPP4R1-201ENST00000285124 ROBO1Q9Y6N7 1651 aa12.58□□□□□ -0.4
PPP4R1-201ENST00000285124 IL16Q14005 1332 aa12.58□□□□□ -0.4
PPP4R1-201ENST00000285124 TRPM3Q9HCF6 1732 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-201ENST00000285124 PRAMEF22A3QJZ6 481 aa12.57□□□□□ -0.4
PPP4R1-201ENST00000285124 PIP4K2AP48426 406 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-201ENST00000285124 LTN1O94822 1766 aa12.57□□□□□ -0.4
PPP4R1-201ENST00000285124 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
PPP4R1-201ENST00000285124 ITPRIPQ8IWB1 547 aa12.57□□□□□ -0.4
PPP4R1-201ENST00000285124 IFNL2Q8IZJ0 200 aa12.56□□□□□ -0.4
PPP4R1-201ENST00000285124 SLIT3O75094 1523 aa12.56□□□□□ -0.4
PPP4R1-201ENST00000285124 CAMTA1Q9Y6Y1 1673 aa12.56□□□□□ -0.4
PPP4R1-201ENST00000285124 MARF1Q9Y4F3 1742 aaKnown RBP12.56□□□□□ -0.4
PPP4R1-201ENST00000285124 RNF123Q5XPI4 1314 aa12.56□□□□□ -0.4
PPP4R1-201ENST00000285124 PTCD1O75127 700 aaKnown RBP12.56□□□□□ -0.4
PPP4R1-201ENST00000285124 PHKG2P15735 406 aa12.56□□□□□ -0.4
PPP4R1-201ENST00000285124 FAM182BQ5T319 152 aa12.56□□□□□ -0.4
PPP4R1-201ENST00000285124 SLC4A10Q6U841 1118 aa12.56□□□□□ -0.4
PPP4R1-201ENST00000285124 CABP4P57796 275 aa12.55□□□□□ -0.4
PPP4R1-201ENST00000285124 ZKSCAN2Q63HK3 967 aa12.55□□□□□ -0.4
PPP4R1-201ENST00000285124 CARD10Q9BWT7 1032 aa12.55□□□□□ -0.4
PPP4R1-201ENST00000285124 CPDO75976 1380 aa12.55□□□□□ -0.4
PPP4R1-201ENST00000285124 TRIM27P14373 513 aa12.55□□□□□ -0.4
PPP4R1-201ENST00000285124 FAM98CQ17RN3 349 aaKnown RBP12.55□□□□□ -0.4
PPP4R1-201ENST00000285124 MEGF6O75095 1541 aa12.54□□□□□ -0.4
PPP4R1-201ENST00000285124 F6X3S4 739 aa12.54□□□□□ -0.4
PPP4R1-201ENST00000285124 G2E3Q7L622 706 aa12.54□□□□□ -0.4
PPP4R1-201ENST00000285124 ACSBG1Q96GR2 724 aa12.54□□□□□ -0.4
PPP4R1-201ENST00000285124 ARXQ96QS3 562 aa12.54□□□□□ -0.4
PPP4R1-201ENST00000285124 ALS2Q96Q42 1657 aa12.54□□□□□ -0.4
PPP4R1-201ENST00000285124 DZIP1LQ8IYY4 767 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-201ENST00000285124 ZNF330Q9Y3S2 320 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-201ENST00000285124 RGPD2P0DJD1 1756 aa12.53□□□□□ -0.4
PPP4R1-201ENST00000285124 RGPD5Q99666 1765 aa12.53□□□□□ -0.4
PPP4R1-201ENST00000285124 EXOC5O00471 708 aa12.52□□□□□ -0.4
PPP4R1-201ENST00000285124 CRB1P82279 1406 aa12.52□□□□□ -0.4
PPP4R1-201ENST00000285124 HDGFL1Q5TGJ6 251 aa12.52□□□□□ -0.4
PPP4R1-201ENST00000285124 AIMP1Q12904 312 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-201ENST00000285124 TMEM57Q8N5G2 664 aa12.52□□□□□ -0.41
PPP4R1-201ENST00000285124 HTATSF1O43719 755 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-201ENST00000285124 ATF7IPQ6VMQ6 1270 aa12.51□□□□□ -0.41
PPP4R1-201ENST00000285124 MRPL50Q8N5N7 158 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-201ENST00000285124 STK31Q9BXU1 1019 aa12.51□□□□□ -0.41
PPP4R1-201ENST00000285124 C1orf115Q9H7X2 142 aa12.51□□□□□ -0.41
PPP4R1-201ENST00000285124 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-201ENST00000285124 TTC5Q8N0Z6 440 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms