RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PANK1Q8TE04 598 aa27.03■■□□□ 1.92
YBX3-202ENST00000279550 FRAT1Q92837 279 aaPredicted RBP27.03■■□□□ 1.92
YBX3-202ENST00000279550 TNNQ9UQP3 1299 aa27.03■■□□□ 1.92
YBX3-202ENST00000279550 CAMTA1Q9Y6Y1 1673 aa27.03■■□□□ 1.92
YBX3-202ENST00000279550 CANXP27824 592 aaKnown RBP27.02■■□□□ 1.92
YBX3-202ENST00000279550 FAM83GA6ND36 823 aa27.02■■□□□ 1.92
YBX3-202ENST00000279550 CT47B1P0C2W7 299 aaPredicted RBP27.02■■□□□ 1.92
YBX3-202ENST00000279550 KDM2BQ8NHM5 1336 aa26.99■■□□□ 1.91
YBX3-202ENST00000279550 FAM208AQ9UK61 1670 aaKnown RBP26.99■■□□□ 1.91
YBX3-202ENST00000279550 COL5A2P05997 1499 aaPredicted RBP26.99■■□□□ 1.91
YBX3-202ENST00000279550 CSB-PGBD3P0DP91 1061 aa26.99■■□□□ 1.91
YBX3-202ENST00000279550 NLRP2Q9NX02 1062 aa26.98■■□□□ 1.91
YBX3-202ENST00000279550 RLBP1P12271 317 aa26.97■■□□□ 1.91
YBX3-202ENST00000279550 COG6Q9Y2V7 657 aa26.97■■□□□ 1.91
YBX3-202ENST00000279550 LAS1LQ9Y4W2 734 aaKnown RBP26.96■■□□□ 1.91
YBX3-202ENST00000279550 JCADQ9P266 1359 aa26.96■■□□□ 1.91
YBX3-202ENST00000279550 WDR17Q8IZU2 1322 aa26.96■■□□□ 1.91
YBX3-202ENST00000279550 MTHFSDQ2M296 383 aaKnown RBP26.95■■□□□ 1.9
YBX3-202ENST00000279550 SSH1Q8WYL5 1049 aa26.95■■□□□ 1.9
YBX3-202ENST00000279550 COL14A1Q05707 1796 aaKnown RBP26.94■■□□□ 1.9
YBX3-202ENST00000279550 ZNF853P0CG23 659 aa26.94■■□□□ 1.9
YBX3-202ENST00000279550 LMOD3Q0VAK6 560 aa26.93■■□□□ 1.9
YBX3-202ENST00000279550 GAS2L2Q8NHY3 880 aa26.93■■□□□ 1.9
YBX3-202ENST00000279550 CALD1Q05682 793 aaKnown RBP26.93■■□□□ 1.9
YBX3-202ENST00000279550 SMC4Q9NTJ3 1288 aa26.93■■□□□ 1.9
YBX3-202ENST00000279550 IFT57Q9NWB7 429 aa26.93■■□□□ 1.9
YBX3-202ENST00000279550 DCTN1Q14203 1278 aa26.92■■□□□ 1.9
YBX3-202ENST00000279550 SKAP1Q86WV1 359 aa26.92■■□□□ 1.9
YBX3-202ENST00000279550 BTG4Q9NY30 223 aa26.92■■□□□ 1.9
YBX3-202ENST00000279550 NUTM2BA6NNL0 878 aaPredicted RBP26.91■■□□□ 1.9
YBX3-202ENST00000279550 NUTM2EB1AL46 878 aaPredicted RBP26.91■■□□□ 1.9
YBX3-202ENST00000279550 ADAMTS2O95450 1211 aa26.91■■□□□ 1.9
YBX3-202ENST00000279550 NUTM2AQ8IVF1 878 aaPredicted RBP26.91■■□□□ 1.9
YBX3-202ENST00000279550 GNAI1P63096 354 aa26.9■■□□□ 1.9
YBX3-202ENST00000279550 HSPA1LP34931 641 aa26.9■■□□□ 1.9
YBX3-202ENST00000279550 EVA1CP58658 441 aa26.9■■□□□ 1.9
YBX3-202ENST00000279550 TOM1L2Q6ZVM7 507 aa26.9■■□□□ 1.9
YBX3-202ENST00000279550 CENPQQ7L2Z9 268 aaPredicted RBP26.9■■□□□ 1.9
YBX3-202ENST00000279550 STRN4Q9NRL3 753 aa26.9■■□□□ 1.9
YBX3-202ENST00000279550 CLUAP1Q96AJ1 413 aa26.89■■□□□ 1.9
YBX3-202ENST00000279550 MBIPQ9NS73 344 aa26.89■■□□□ 1.9
YBX3-202ENST00000279550 ZKSCAN2Q63HK3 967 aa26.88■■□□□ 1.89
YBX3-202ENST00000279550 LARP1Q6PKG0 1096 aaKnown RBP26.87■■□□□ 1.89
YBX3-202ENST00000279550 RAPGEF4Q8WZA2 1011 aa26.87■■□□□ 1.89
YBX3-202ENST00000279550 AMOTQ4VCS5 1084 aa26.86■■□□□ 1.89
YBX3-202ENST00000279550 TCERG1O14776 1098 aaKnown RBP26.85■■□□□ 1.89
YBX3-202ENST00000279550 PLEKHO1Q53GL0 409 aaPredicted RBP26.85■■□□□ 1.89
YBX3-202ENST00000279550 TSPYL6Q8N831 410 aa26.85■■□□□ 1.89
YBX3-202ENST00000279550 CFAP44Q96MT7 982 aa26.85■■□□□ 1.89
YBX3-202ENST00000279550 CARD10Q9BWT7 1032 aa26.85■■□□□ 1.89
YBX3-202ENST00000279550 SPATA31A6Q5VVP1 1343 aa26.85■■□□□ 1.89
YBX3-202ENST00000279550 MEGF6O75095 1541 aa26.84■■□□□ 1.89
YBX3-202ENST00000279550 PLEKHG2Q9H7P9 1386 aa26.84■■□□□ 1.89
YBX3-202ENST00000279550 CRB1P82279 1406 aa26.84■■□□□ 1.89
YBX3-202ENST00000279550 PLCH1Q4KWH8 1693 aa26.83■■□□□ 1.89
YBX3-202ENST00000279550 GNAT3A8MTJ3 354 aa26.83■■□□□ 1.89
YBX3-202ENST00000279550 VAMP4O75379 141 aa26.83■■□□□ 1.89
YBX3-202ENST00000279550 ALDH1L2Q3SY69 923 aa26.83■■□□□ 1.89
YBX3-202ENST00000279550 DZIP1LQ8IYY4 767 aaKnown RBP26.83■■□□□ 1.89
YBX3-202ENST00000279550 RTF1Q92541 710 aaKnown RBP26.83■■□□□ 1.89
YBX3-202ENST00000279550 NOB1Q9ULX3 412 aaKnown RBP26.83■■□□□ 1.89
YBX3-202ENST00000279550 MAP3K5Q99683 1374 aa26.83■■□□□ 1.88
YBX3-202ENST00000279550 HTATSF1O43719 755 aaKnown RBP26.82■■□□□ 1.88
YBX3-202ENST00000279550 TRIM27P14373 513 aa26.82■■□□□ 1.88
YBX3-202ENST00000279550 TATP17735 454 aaPredicted RBP26.82■■□□□ 1.88
YBX3-202ENST00000279550 MCM10Q7L590 875 aa26.82■■□□□ 1.88
YBX3-202ENST00000279550 IGHDP01880 384 aa26.82■■□□□ 1.88
YBX3-202ENST00000279550 MVPQ14764 893 aaKnown RBP26.8■■□□□ 1.88
YBX3-202ENST00000279550 ZNF530Q6P9A1 599 aaPredicted RBP26.8■■□□□ 1.88
YBX3-202ENST00000279550 C8orf58Q8NAV2 365 aa26.8■■□□□ 1.88
YBX3-202ENST00000279550 ATF7IPQ6VMQ6 1270 aa26.79■■□□□ 1.88
YBX3-202ENST00000279550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.79■■□□□ 1.881e-6■■□□□ 12.5
YBX3-202ENST00000279550 SLIT2O94813 1529 aa26.78■■□□□ 1.88
YBX3-202ENST00000279550 ELL2O00472 640 aaPredicted RBP26.78■■□□□ 1.88
YBX3-202ENST00000279550 AKAP4Q5JQC9 854 aa26.78■■□□□ 1.88
YBX3-202ENST00000279550 FTSJ3Q8IY81 847 aaKnown RBP26.78■■□□□ 1.88
YBX3-202ENST00000279550 ZNF428Q96B54 188 aa26.77■■□□□ 1.88
YBX3-202ENST00000279550 KIF16BQ96L93 1317 aa26.77■■□□□ 1.88
YBX3-202ENST00000279550 OVOS2A0A0G2JMS6 1433 aa26.77■■□□□ 1.88
YBX3-202ENST00000279550 LRP6O75581 1613 aa26.77■■□□□ 1.88
YBX3-202ENST00000279550 NRAPQ86VF7 1730 aa26.77■■□□□ 1.88
YBX3-202ENST00000279550 MS4A1P11836 297 aa26.76■■□□□ 1.88
YBX3-202ENST00000279550 MRPL50Q8N5N7 158 aaKnown RBP26.76■■□□□ 1.88
YBX3-202ENST00000279550 SPG7Q9UQ90 795 aa26.76■■□□□ 1.88
YBX3-202ENST00000279550 PCDHB15Q9Y5E8 787 aa26.76■■□□□ 1.88
YBX3-202ENST00000279550 NWD2Q9ULI1 1742 aa26.76■■□□□ 1.87
YBX3-202ENST00000279550 BRPF1P55201 1214 aaPredicted RBP26.76■■□□□ 1.87
YBX3-202ENST00000279550 C1orf141Q5JVX7 400 aa26.76■■□□□ 1.87
YBX3-202ENST00000279550 USP35Q9P2H5 1018 aa26.76■■□□□ 1.87
YBX3-202ENST00000279550 CHL1O00533 1208 aa26.75■■□□□ 1.87
YBX3-202ENST00000279550 IL2RBP14784 551 aa26.75■■□□□ 1.87
YBX3-202ENST00000279550 AAMPQ13685 434 aa26.75■■□□□ 1.87
YBX3-202ENST00000279550 TWISTNBQ3B726 338 aaPredicted RBP26.75■■□□□ 1.87
YBX3-202ENST00000279550 PARP4Q9UKK3 1724 aaKnown RBP26.75■■□□□ 1.87
YBX3-202ENST00000279550 PKD1L3Q7Z443 1732 aa26.74■■□□□ 1.87
YBX3-202ENST00000279550 IL17REQ8NFR9 667 aa26.74■■□□□ 1.87
YBX3-202ENST00000279550 C8orf37Q96NL8 207 aa26.74■■□□□ 1.87
YBX3-202ENST00000279550 LRRC37A3O60309 1634 aa26.73■■□□□ 1.87
YBX3-202ENST00000279550 CEMIPQ8WUJ3 1361 aa26.72■■□□□ 1.87
YBX3-202ENST00000279550 TMEM57Q8N5G2 664 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms