RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 NSD2O96028 1365 aa32.99■■■□□ 2.87
SSBP4-201ENST00000270061 EZH2Q15910 746 aaKnown RBP32.98■■■□□ 2.87
SSBP4-201ENST00000270061 CAMKK2Q96RR4 588 aa32.98■■■□□ 2.87
SSBP4-201ENST00000270061 NBPF6Q5VWK0 638 aa32.97■■■□□ 2.87
SSBP4-201ENST00000270061 NBPF4Q96M43 638 aa32.97■■■□□ 2.87
SSBP4-201ENST00000270061 TNNT2P45379 298 aaPredicted RBP32.96■■■□□ 2.87
SSBP4-201ENST00000270061 BCL11BQ9C0K0 894 aaPredicted RBP32.95■■■□□ 2.87
SSBP4-201ENST00000270061 FAM9BQ8IZU0 186 aa32.94■■■□□ 2.86
SSBP4-201ENST00000270061 PNISRQ8TF01 805 aaKnown RBP32.94■■■□□ 2.86
SSBP4-201ENST00000270061 POLKQ9UBT6 870 aa32.93■■■□□ 2.86
SSBP4-201ENST00000270061 RREB1Q92766 1687 aa32.93■■■□□ 2.86
SSBP4-201ENST00000270061 USHBP1Q8N6Y0 703 aa32.92■■■□□ 2.86
SSBP4-201ENST00000270061 RGPD3A6NKT7 1758 aaPredicted RBP32.91■■■□□ 2.86
SSBP4-201ENST00000270061 RGPD4Q7Z3J3 1758 aa32.91■■■□□ 2.86
SSBP4-201ENST00000270061 MEGF6O75095 1541 aa32.9■■■□□ 2.86
SSBP4-201ENST00000270061 PTF1AQ7RTS3 328 aa32.9■■■□□ 2.86
SSBP4-201ENST00000270061 NHSQ6T4R5 1651 aa32.89■■■□□ 2.86
SSBP4-201ENST00000270061 MORC1Q86VD1 984 aa32.88■■■□□ 2.85
SSBP4-201ENST00000270061 DDX54Q8TDD1 881 aaKnown RBP32.88■■■□□ 2.85
SSBP4-201ENST00000270061 SHANK3Q9BYB0 1731 aa32.88■■■□□ 2.85
SSBP4-201ENST00000270061 RAPGEF4Q8WZA2 1011 aa32.88■■■□□ 2.85
SSBP4-201ENST00000270061 HNRNPUQ00839 825 aaKnown RBP eCLIP32.87■■■□□ 2.85
SSBP4-201ENST00000270061 NUP188Q5SRE5 1749 aa32.87■■■□□ 2.85
SSBP4-201ENST00000270061 PLSCR1O15162 318 aa32.86■■■□□ 2.85
SSBP4-201ENST00000270061 ZCRB1Q8TBF4 217 aaKnown RBP32.86■■■□□ 2.85
SSBP4-201ENST00000270061 ACSBG1Q96GR2 724 aa32.85■■■□□ 2.85
SSBP4-201ENST00000270061 PPP2R1AP30153 589 aa32.84■■■□□ 2.85
SSBP4-201ENST00000270061 KCNQ2O43526 872 aa32.83■■■□□ 2.85
SSBP4-201ENST00000270061 TATP17735 454 aaPredicted RBP32.83■■■□□ 2.85
SSBP4-201ENST00000270061 PSDA5PKW4 1024 aaPredicted RBP32.82■■■□□ 2.84
SSBP4-201ENST00000270061 BTAF1O14981 1849 aa32.8■■■□□ 2.84
SSBP4-201ENST00000270061 NCAPD2Q15021 1401 aa32.78■■■□□ 2.84
SSBP4-201ENST00000270061 R3HDM1Q15032 1099 aaKnown RBP32.78■■■□□ 2.84
SSBP4-201ENST00000270061 EYA1Q99502 592 aa32.78■■■□□ 2.84
SSBP4-201ENST00000270061 EIF4A2Q14240 407 aaKnown RBP32.77■■■□□ 2.84
SSBP4-201ENST00000270061 DOT1LQ8TEK3 1739 aa32.76■■■□□ 2.84
SSBP4-201ENST00000270061 NBPF14Q5TI25 921 aa32.75■■■□□ 2.83
SSBP4-201ENST00000270061 PKD1L3Q7Z443 1732 aa32.74■■■□□ 2.83
SSBP4-201ENST00000270061 ZBED9Q6R2W3 1325 aa32.73■■■□□ 2.83
SSBP4-201ENST00000270061 PCDH11XQ9BZA7 1347 aa32.72■■■□□ 2.83
SSBP4-201ENST00000270061 PCDH11YQ9BZA8 1340 aa32.72■■■□□ 2.83
SSBP4-201ENST00000270061 PROM2Q8N271 834 aa32.7■■■□□ 2.83
SSBP4-201ENST00000270061 TXNRD1Q16881 649 aa32.69■■■□□ 2.82
SSBP4-201ENST00000270061 SYTL4Q96C24 671 aaPredicted RBP32.69■■■□□ 2.82
SSBP4-201ENST00000270061 PRIM1P49642 420 aaKnown RBP32.67■■■□□ 2.82
SSBP4-201ENST00000270061 IGSF1Q8N6C5 1336 aa32.66■■■□□ 2.82
SSBP4-201ENST00000270061 SPG7Q9UQ90 795 aa32.65■■■□□ 2.82
SSBP4-201ENST00000270061 CYP27B1O15528 508 aa32.64■■■□□ 2.82
SSBP4-201ENST00000270061 GTF3C3Q9Y5Q9 886 aa32.64■■■□□ 2.82
SSBP4-201ENST00000270061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.63■■■□□ 2.813e-6■■□□□ 13.5
SSBP4-201ENST00000270061 LRP5O75197 1615 aa32.62■■■□□ 2.81
SSBP4-201ENST00000270061 MTHFSP49914 203 aa32.62■■■□□ 2.81
SSBP4-201ENST00000270061 ANO8Q9HCE9 1232 aaPredicted RBP32.6■■■□□ 2.81
SSBP4-201ENST00000270061 ITGB4P16144 1822 aa32.59■■■□□ 2.81
SSBP4-201ENST00000270061 PLEKHG2Q9H7P9 1386 aa32.59■■■□□ 2.81
SSBP4-201ENST00000270061 TOGARAM1Q9Y4F4 1720 aa32.58■■■□□ 2.81
SSBP4-201ENST00000270061 LY75O60449 1722 aa32.56■■■□□ 2.8
SSBP4-201ENST00000270061 IL13P35225 146 aa32.56■■■□□ 2.8
SSBP4-201ENST00000270061 NKX1-1Q15270 411 aaPredicted RBP32.54■■■□□ 2.8
SSBP4-201ENST00000270061 STK32BQ9NY57 414 aa32.54■■■□□ 2.8
SSBP4-201ENST00000270061 IFNL2Q8IZJ0 200 aa32.53■■■□□ 2.8
SSBP4-201ENST00000270061 PAPPAQ13219 1627 aa32.53■■■□□ 2.8
SSBP4-201ENST00000270061 WDR43Q15061 677 aaKnown RBP eCLIP32.53■■■□□ 2.8
SSBP4-201ENST00000270061 SLC27A3Q5K4L6 730 aa32.53■■■□□ 2.8
SSBP4-201ENST00000270061 AEBP1Q8IUX7 1158 aa32.53■■■□□ 2.8
SSBP4-201ENST00000270061 SULT6B1Q6IMI4 303 aa32.52■■■□□ 2.8
SSBP4-201ENST00000270061 ADAMTS8Q9UP79 889 aa32.52■■■□□ 2.8
SSBP4-201ENST00000270061 PHKG2P15735 406 aa32.51■■■□□ 2.79
SSBP4-201ENST00000270061 SLC15A2Q16348 729 aa32.51■■■□□ 2.79
SSBP4-201ENST00000270061 MPRIPQ6WCQ1 1025 aa32.51■■■□□ 2.79
SSBP4-201ENST00000270061 LRRC4BQ9NT99 713 aa32.51■■■□□ 2.79
SSBP4-201ENST00000270061 KDRP35968 1356 aa32.5■■■□□ 2.79
SSBP4-201ENST00000270061 PLEKHO1Q53GL0 409 aaPredicted RBP32.5■■■□□ 2.79
SSBP4-201ENST00000270061 CASZ1Q86V15 1759 aa32.48■■■□□ 2.79
SSBP4-201ENST00000270061 AMOTQ4VCS5 1084 aa32.47■■■□□ 2.79
SSBP4-201ENST00000270061 DIAPH1O60610 1272 aaKnown RBP32.47■■■□□ 2.79
SSBP4-201ENST00000270061 KCNQ4P56696 695 aa32.43■■■□□ 2.78
SSBP4-201ENST00000270061 ZNF530Q6P9A1 599 aaPredicted RBP32.43■■■□□ 2.78
SSBP4-201ENST00000270061 CFAP53Q96M91 514 aa32.43■■■□□ 2.78
SSBP4-201ENST00000270061 CCNL1Q9UK58 526 aaPredicted RBP32.43■■■□□ 2.78
SSBP4-201ENST00000270061 COL3A1P02461 1466 aaPredicted RBP32.42■■■□□ 2.78
SSBP4-201ENST00000270061 HSP90AB1P08238 724 aaKnown RBP32.42■■■□□ 2.78
SSBP4-201ENST00000270061 PIGBQ92521 554 aa32.42■■■□□ 2.78
SSBP4-201ENST00000270061 PDGFDQ9GZP0 370 aaPredicted RBP32.41■■■□□ 2.78
SSBP4-201ENST00000270061 TMOD3Q9NYL9 352 aa32.41■■■□□ 2.78
SSBP4-201ENST00000270061 PALLDQ8WX93 1383 aa32.4■■■□□ 2.78
SSBP4-201ENST00000270061 ZNF827Q17R98 1081 aa32.4■■■□□ 2.78
SSBP4-201ENST00000270061 SPON1Q9HCB6 807 aa32.4■■■□□ 2.78
SSBP4-201ENST00000270061 HMOX1P09601 288 aa32.4■■■□□ 2.78
SSBP4-201ENST00000270061 SMARCC1Q92922 1105 aaPredicted RBP32.39■■■□□ 2.78
SSBP4-201ENST00000270061 C1orf141Q5JVX7 400 aa32.38■■■□□ 2.77
SSBP4-201ENST00000270061 DCAF5Q96JK2 942 aa32.38■■■□□ 2.77
SSBP4-201ENST00000270061 QSER1Q2KHR3 1735 aa32.38■■■□□ 2.77
SSBP4-201ENST00000270061 AKT1S1Q96B36 256 aa32.37■■■□□ 2.77
SSBP4-201ENST00000270061 TAF1LQ8IZX4 1826 aa32.37■■■□□ 2.77
SSBP4-201ENST00000270061 C5P01031 1676 aa32.37■■■□□ 2.77
SSBP4-201ENST00000270061 TUBGCP6Q96RT7 1819 aa32.36■■■□□ 2.77
SSBP4-201ENST00000270061 ERVV-2B6SEH9 535 aa32.35■■■□□ 2.77
SSBP4-201ENST00000270061 U2SURPO15042 1029 aaKnown RBP32.34■■■□□ 2.77
SSBP4-201ENST00000270061 ZBTB7AO95365 584 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms