RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 CGNL1Q0VF96 1302 aa24.29■■□□□ 1.48
CSNK1D-201ENST00000269361 KIF24Q5T7B8 1368 aa24.29■■□□□ 1.48
CSNK1D-201ENST00000269361 FLT4P35916 1363 aa24.28■■□□□ 1.48
CSNK1D-201ENST00000269361 SLC27A3Q5K4L6 730 aa24.27■■□□□ 1.48
CSNK1D-201ENST00000269361 MTFR1LQ9H019 292 aa24.27■■□□□ 1.48
CSNK1D-201ENST00000269361 ZNF827Q17R98 1081 aa24.26■■□□□ 1.47
CSNK1D-201ENST00000269361 TATP17735 454 aaPredicted RBP24.25■■□□□ 1.47
CSNK1D-201ENST00000269361 EMILIN1Q9Y6C2 1016 aa24.25■■□□□ 1.47
CSNK1D-201ENST00000269361 BTAF1O14981 1849 aa24.25■■□□□ 1.47
CSNK1D-201ENST00000269361 DCAF8L1A6NGE4 600 aa24.24■■□□□ 1.47
CSNK1D-201ENST00000269361 AKT1S1Q96B36 256 aa24.23■■□□□ 1.47
CSNK1D-201ENST00000269361 NSD2O96028 1365 aa24.23■■□□□ 1.47
CSNK1D-201ENST00000269361 PAPPAQ13219 1627 aa24.22■■□□□ 1.47
CSNK1D-201ENST00000269361 PPM1GO15355 546 aaPredicted RBP24.22■■□□□ 1.47
CSNK1D-201ENST00000269361 POLR3GLQ9BT43 218 aa24.22■■□□□ 1.47
CSNK1D-201ENST00000269361 MYOM1P52179 1685 aa24.21■■□□□ 1.47
CSNK1D-201ENST00000269361 SGIP1Q9BQI5 828 aa24.21■■□□□ 1.47
CSNK1D-201ENST00000269361 KIF20BQ96Q89 1820 aa24.2■■□□□ 1.46
CSNK1D-201ENST00000269361 KCNQ4P56696 695 aa24.2■■□□□ 1.46
CSNK1D-201ENST00000269361 EIF4G2P78344 907 aaKnown RBP eCLIP24.2■■□□□ 1.46
CSNK1D-201ENST00000269361 CCER1Q8TC90 406 aaPredicted RBP24.2■■□□□ 1.46
CSNK1D-201ENST00000269361 RGPD2P0DJD1 1756 aa24.2■■□□□ 1.46
CSNK1D-201ENST00000269361 PCDH11XQ9BZA7 1347 aa24.18■■□□□ 1.46
CSNK1D-201ENST00000269361 PCDH11YQ9BZA8 1340 aa24.18■■□□□ 1.46
CSNK1D-201ENST00000269361 WASHC2AQ641Q2 1341 aa24.17■■□□□ 1.46
CSNK1D-201ENST00000269361 HSPA5P11021 654 aaKnown RBP24.17■■□□□ 1.46
CSNK1D-201ENST00000269361 FHDC1Q9C0D6 1143 aaPredicted RBP24.17■■□□□ 1.46
CSNK1D-201ENST00000269361 ARXQ96QS3 562 aa24.16■■□□□ 1.46
CSNK1D-201ENST00000269361 SYT17Q9BSW7 474 aa24.16■■□□□ 1.46
CSNK1D-201ENST00000269361 TFCP2L1Q9NZI6 479 aa24.16■■□□□ 1.46
CSNK1D-201ENST00000269361 CCNL1Q9UK58 526 aaPredicted RBP24.16■■□□□ 1.46
CSNK1D-201ENST00000269361 SHANK3Q9BYB0 1731 aa24.15■■□□□ 1.46
CSNK1D-201ENST00000269361 CYP27B1O15528 508 aa24.15■■□□□ 1.46
CSNK1D-201ENST00000269361 YY1P25490 414 aa24.15■■□□□ 1.46
CSNK1D-201ENST00000269361 SLC16A10Q8TF71 515 aa24.15■■□□□ 1.46
CSNK1D-201ENST00000269361 POLKQ9UBT6 870 aa24.15■■□□□ 1.46
CSNK1D-201ENST00000269361 PNPLA7Q6ZV29 1317 aa24.14■■□□□ 1.46
CSNK1D-201ENST00000269361 DOT1LQ8TEK3 1739 aa24.14■■□□□ 1.45
CSNK1D-201ENST00000269361 KAT6BQ8WYB5 2073 aa24.14■■□□□ 1.45
CSNK1D-201ENST00000269361 TNNT2P45379 298 aaPredicted RBP24.11■■□□□ 1.45
CSNK1D-201ENST00000269361 MPRIPQ6WCQ1 1025 aa24.11■■□□□ 1.45
CSNK1D-201ENST00000269361 EYA1Q99502 592 aa24.11■■□□□ 1.45
CSNK1D-201ENST00000269361 PANK3Q9H999 370 aa24.11■■□□□ 1.45
CSNK1D-201ENST00000269361 NCAPD2Q15021 1401 aa24.1■■□□□ 1.45
CSNK1D-201ENST00000269361 SPG7Q9UQ90 795 aa24.1■■□□□ 1.45
CSNK1D-201ENST00000269361 NKX1-1Q15270 411 aaPredicted RBP24.08■■□□□ 1.45
CSNK1D-201ENST00000269361 POLD1P28340 1107 aa24.07■■□□□ 1.44
CSNK1D-201ENST00000269361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.07■■□□□ 1.44
CSNK1D-201ENST00000269361 MAP3K5Q99683 1374 aa24.06■■□□□ 1.44
CSNK1D-201ENST00000269361 EIF4A2Q14240 407 aaKnown RBP24.06■■□□□ 1.44
CSNK1D-201ENST00000269361 PALLDQ8WX93 1383 aa24.05■■□□□ 1.44
CSNK1D-201ENST00000269361 LY75O60449 1722 aa24.05■■□□□ 1.44
CSNK1D-201ENST00000269361 HMGB2P26583 209 aaKnown RBP24.05■■□□□ 1.44
CSNK1D-201ENST00000269361 COL23A1Q86Y22 540 aaPredicted RBP24.04■■□□□ 1.44
CSNK1D-201ENST00000269361 PIGBQ92521 554 aa24.04■■□□□ 1.44
CSNK1D-201ENST00000269361 SMARCC1Q92922 1105 aaPredicted RBP24.04■■□□□ 1.44
CSNK1D-201ENST00000269361 ANKRD26Q9UPS8 1709 aa24.04■■□□□ 1.44
CSNK1D-201ENST00000269361 MSH5O43196 834 aa24.03■■□□□ 1.44
CSNK1D-201ENST00000269361 QSER1Q2KHR3 1735 aa24.01■■□□□ 1.43
CSNK1D-201ENST00000269361 PHKG2P15735 406 aa24■■□□□ 1.43
CSNK1D-201ENST00000269361 IFNL2Q8IZJ0 200 aa24■■□□□ 1.43
CSNK1D-201ENST00000269361 KLHL34Q8N239 644 aa24■■□□□ 1.43
CSNK1D-201ENST00000269361 PKD1L3Q7Z443 1732 aa24■■□□□ 1.43
CSNK1D-201ENST00000269361 MORC1Q86VD1 984 aa23.99■■□□□ 1.43
CSNK1D-201ENST00000269361 FLAD1Q8NFF5 587 aa23.98■■□□□ 1.43
CSNK1D-201ENST00000269361 TMOD3Q9NYL9 352 aa23.98■■□□□ 1.43
CSNK1D-201ENST00000269361 IGSF1Q8N6C5 1336 aa23.98■■□□□ 1.43
CSNK1D-201ENST00000269361 MAP2P11137 1827 aaKnown RBP23.97■■□□□ 1.43
CSNK1D-201ENST00000269361 KNSTRNQ9Y448 316 aa23.96■■□□□ 1.43
CSNK1D-201ENST00000269361 TOGARAM1Q9Y4F4 1720 aa23.96■■□□□ 1.43
CSNK1D-201ENST00000269361 PLEKHG2Q9H7P9 1386 aa23.95■■□□□ 1.42
CSNK1D-201ENST00000269361 LOC102724428A0A0B4J2F2 783 aa23.94■■□□□ 1.42
CSNK1D-201ENST00000269361 SIK1P57059 783 aa23.94■■□□□ 1.42
CSNK1D-201ENST00000269361 GPR162Q16538 588 aa23.94■■□□□ 1.42
CSNK1D-201ENST00000269361 MSL1Q68DK7 614 aa23.94■■□□□ 1.42
CSNK1D-201ENST00000269361 AK7Q96M32 723 aa23.94■■□□□ 1.42
CSNK1D-201ENST00000269361 ASAP1Q9ULH1 1129 aa23.94■■□□□ 1.42
CSNK1D-201ENST00000269361 TUBGCP6Q96RT7 1819 aa23.94■■□□□ 1.42
CSNK1D-201ENST00000269361 COL24A1Q17RW2 1714 aa23.93■■□□□ 1.42
CSNK1D-201ENST00000269361 UTRNP46939 3433 aa23.93■■□□□ 1.42
CSNK1D-201ENST00000269361 PLEKHO1Q53GL0 409 aaPredicted RBP23.92■■□□□ 1.42
CSNK1D-201ENST00000269361 NLGN2Q8NFZ4 835 aa23.92■■□□□ 1.42
CSNK1D-201ENST00000269361 ATG3Q9NT62 314 aa23.91■■□□□ 1.42
CSNK1D-201ENST00000269361 C5P01031 1676 aa23.91■■□□□ 1.42
CSNK1D-201ENST00000269361 AMIGO3Q86WK7 504 aa23.9■■□□□ 1.42
CSNK1D-201ENST00000269361 LINC00116Q8NCU8 138 aa23.9■■□□□ 1.42
CSNK1D-201ENST00000269361 KIF7Q2M1P5 1343 aa23.89■■□□□ 1.42
CSNK1D-201ENST00000269361 ERVV-2B6SEH9 535 aa23.89■■□□□ 1.41
CSNK1D-201ENST00000269361 HSP90AB1P08238 724 aaKnown RBP23.89■■□□□ 1.41
CSNK1D-201ENST00000269361 AMER1Q5JTC6 1135 aaPredicted RBP23.89■■□□□ 1.41
CSNK1D-201ENST00000269361 DCAF5Q96JK2 942 aa23.89■■□□□ 1.41
CSNK1D-201ENST00000269361 ITGB4P16144 1822 aa23.89■■□□□ 1.41
CSNK1D-201ENST00000269361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.88■■□□□ 1.41
CSNK1D-201ENST00000269361 ATP6V1AP38606 617 aa23.88■■□□□ 1.41
CSNK1D-201ENST00000269361 ITPK1Q13572 414 aa23.88■■□□□ 1.41
CSNK1D-201ENST00000269361 AMOTQ4VCS5 1084 aa23.88■■□□□ 1.41
CSNK1D-201ENST00000269361 SMIM5Q71RC9 77 aa23.88■■□□□ 1.41
CSNK1D-201ENST00000269361 PELP1Q8IZL8 1130 aaKnown RBP23.88■■□□□ 1.41
CSNK1D-201ENST00000269361 PHF14O94880 888 aa23.87■■□□□ 1.41
CSNK1D-201ENST00000269361 ZNF530Q6P9A1 599 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms