RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 CAMTA1Q9Y6Y1 1673 aa26.45■■□□□ 1.82
LYSMD2-201ENST00000267838 NCAPD2Q15021 1401 aa26.45■■□□□ 1.82
LYSMD2-201ENST00000267838 ZNF428Q96B54 188 aa26.44■■□□□ 1.82
LYSMD2-201ENST00000267838 CRB1P82279 1406 aa26.44■■□□□ 1.82
LYSMD2-201ENST00000267838 COL18A1P39060 1754 aa26.43■■□□□ 1.82
LYSMD2-201ENST00000267838 ALDH1L2Q3SY69 923 aa26.43■■□□□ 1.82
LYSMD2-201ENST00000267838 NHSL1Q5SYE7 1610 aa26.42■■□□□ 1.82
LYSMD2-201ENST00000267838 CHL1O00533 1208 aa26.42■■□□□ 1.82
LYSMD2-201ENST00000267838 ABCC6O95255 1503 aa26.41■■□□□ 1.82
LYSMD2-201ENST00000267838 GNAT3A8MTJ3 354 aa26.41■■□□□ 1.82
LYSMD2-201ENST00000267838 PANK1Q8TE04 598 aa26.41■■□□□ 1.82
LYSMD2-201ENST00000267838 VAMP4O75379 141 aa26.41■■□□□ 1.82
LYSMD2-201ENST00000267838 LRRC37A3O60309 1634 aa26.4■■□□□ 1.82
LYSMD2-201ENST00000267838 MAP3K5Q99683 1374 aa26.4■■□□□ 1.82
LYSMD2-201ENST00000267838 ZKSCAN2Q63HK3 967 aa26.4■■□□□ 1.82
LYSMD2-201ENST00000267838 TSPYL6Q8N831 410 aa26.4■■□□□ 1.82
LYSMD2-201ENST00000267838 ERBB3P21860 1342 aa26.4■■□□□ 1.82
LYSMD2-201ENST00000267838 CPDO75976 1380 aa26.38■■□□□ 1.81
LYSMD2-201ENST00000267838 TWISTNBQ3B726 338 aaPredicted RBP26.38■■□□□ 1.81
LYSMD2-201ENST00000267838 C8orf58Q8NAV2 365 aa26.38■■□□□ 1.81
LYSMD2-201ENST00000267838 LMO7Q8WWI1 1683 aa26.38■■□□□ 1.81
LYSMD2-201ENST00000267838 LTBP4Q8N2S1 1624 aa26.37■■□□□ 1.81
LYSMD2-201ENST00000267838 TNNQ9UQP3 1299 aa26.37■■□□□ 1.81
LYSMD2-201ENST00000267838 COG6Q9Y2V7 657 aa26.37■■□□□ 1.81
LYSMD2-201ENST00000267838 MSH5O43196 834 aa26.36■■□□□ 1.81
LYSMD2-201ENST00000267838 KIAA0232Q92628 1395 aa26.36■■□□□ 1.81
LYSMD2-201ENST00000267838 KIF16BQ96L93 1317 aa26.36■■□□□ 1.81
LYSMD2-201ENST00000267838 MS4A1P11836 297 aa26.35■■□□□ 1.81
LYSMD2-201ENST00000267838 ELL2O00472 640 aaPredicted RBP26.35■■□□□ 1.81
LYSMD2-201ENST00000267838 RLBP1P12271 317 aa26.35■■□□□ 1.81
LYSMD2-201ENST00000267838 BRPF1P55201 1214 aaPredicted RBP26.35■■□□□ 1.81
LYSMD2-201ENST00000267838 NOB1Q9ULX3 412 aaKnown RBP26.34■■□□□ 1.81
LYSMD2-201ENST00000267838 PLEKHO1Q53GL0 409 aaPredicted RBP26.33■■□□□ 1.81
LYSMD2-201ENST00000267838 ERICH6Q7L0X2 663 aa26.33■■□□□ 1.81
LYSMD2-201ENST00000267838 CLUAP1Q96AJ1 413 aa26.33■■□□□ 1.81
LYSMD2-201ENST00000267838 FAM208AQ9UK61 1670 aaKnown RBP26.33■■□□□ 1.81
LYSMD2-201ENST00000267838 CHRNA2Q15822 529 aa26.33■■□□□ 1.8
LYSMD2-201ENST00000267838 AMOTQ4VCS5 1084 aa26.33■■□□□ 1.8
LYSMD2-201ENST00000267838 DZIP1LQ8IYY4 767 aaKnown RBP26.33■■□□□ 1.8
LYSMD2-201ENST00000267838 IL17REQ8NFR9 667 aa26.33■■□□□ 1.8
LYSMD2-201ENST00000267838 ABCA3Q99758 1704 aa26.32■■□□□ 1.8
LYSMD2-201ENST00000267838 IPO8O15397 1037 aaKnown RBP26.32■■□□□ 1.8
LYSMD2-201ENST00000267838 ATF7IPQ6VMQ6 1270 aa26.32■■□□□ 1.8
LYSMD2-201ENST00000267838 TRIM27P14373 513 aa26.31■■□□□ 1.8
LYSMD2-201ENST00000267838 FTSJ3Q8IY81 847 aaKnown RBP26.31■■□□□ 1.8
LYSMD2-201ENST00000267838 TSPYL4Q9UJ04 414 aa26.31■■□□□ 1.8
LYSMD2-201ENST00000267838 MRPL50Q8N5N7 158 aaKnown RBP26.3■■□□□ 1.8
LYSMD2-201ENST00000267838 HAP1P54257 671 aaPredicted RBP26.3■■□□□ 1.8
LYSMD2-201ENST00000267838 MIS18AQ9NYP9 233 aa26.3■■□□□ 1.8
LYSMD2-201ENST00000267838 NLRP2Q9NX02 1062 aa26.29■■□□□ 1.8
LYSMD2-201ENST00000267838 AAMPQ13685 434 aa26.28■■□□□ 1.8
LYSMD2-201ENST00000267838 AKAP4Q5JQC9 854 aa26.28■■□□□ 1.8
LYSMD2-201ENST00000267838 ZNF530Q6P9A1 599 aaPredicted RBP26.28■■□□□ 1.8
LYSMD2-201ENST00000267838 ROBO1Q9Y6N7 1651 aa26.28■■□□□ 1.8
LYSMD2-201ENST00000267838 CSB-PGBD3P0DP91 1061 aa26.28■■□□□ 1.8
LYSMD2-201ENST00000267838 MVPQ14764 893 aaKnown RBP26.28■■□□□ 1.8
LYSMD2-201ENST00000267838 KRT24Q2M2I5 525 aa26.28■■□□□ 1.8
LYSMD2-201ENST00000267838 CEMIPQ8WUJ3 1361 aa26.27■■□□□ 1.8
LYSMD2-201ENST00000267838 PRDM11Q9NQV5 511 aa26.26■■□□□ 1.79
LYSMD2-201ENST00000267838 BABAM1Q9NWV8 329 aa26.26■■□□□ 1.79
LYSMD2-201ENST00000267838 TAF7Q15545 349 aaPredicted RBP26.25■■□□□ 1.79
LYSMD2-201ENST00000267838 KDM2BQ8NHM5 1336 aa26.25■■□□□ 1.79
LYSMD2-201ENST00000267838 TCERG1O14776 1098 aaKnown RBP26.24■■□□□ 1.79
LYSMD2-201ENST00000267838 C1orf141Q5JVX7 400 aa26.24■■□□□ 1.79
LYSMD2-201ENST00000267838 ARHGAP45Q92619 1136 aa26.24■■□□□ 1.79
LYSMD2-201ENST00000267838 CENPQQ7L2Z9 268 aaPredicted RBP26.23■■□□□ 1.79
LYSMD2-201ENST00000267838 RAPGEF4Q8WZA2 1011 aa26.23■■□□□ 1.79
LYSMD2-201ENST00000267838 AHDC1Q5TGY3 1603 aaPredicted RBP26.22■■□□□ 1.79
LYSMD2-201ENST00000267838 LGR6Q9HBX8 967 aa26.22■■□□□ 1.79
LYSMD2-201ENST00000267838 VIRMAQ69YN4 1812 aaKnown RBP26.22■■□□□ 1.79
LYSMD2-201ENST00000267838 TATP17735 454 aaPredicted RBP26.2■■□□□ 1.79
LYSMD2-201ENST00000267838 TMEM57Q8N5G2 664 aa26.2■■□□□ 1.78
LYSMD2-201ENST00000267838 DDX19BQ9UMR2 479 aa26.2■■□□□ 1.78
LYSMD2-201ENST00000267838 PLEKHG2Q9H7P9 1386 aa26.2■■□□□ 1.78
LYSMD2-201ENST00000267838 OVOS2A0A0G2JMS6 1433 aa26.2■■□□□ 1.78
LYSMD2-201ENST00000267838 MEGF6O75095 1541 aa26.19■■□□□ 1.78
LYSMD2-201ENST00000267838 MPRIPQ6WCQ1 1025 aa26.19■■□□□ 1.78
LYSMD2-201ENST00000267838 ITPRIPQ8IWB1 547 aa26.19■■□□□ 1.78
LYSMD2-201ENST00000267838 RNMTO43148 476 aaKnown RBP26.18■■□□□ 1.78
LYSMD2-201ENST00000267838 COL5A2P05997 1499 aaPredicted RBP26.17■■□□□ 1.78
LYSMD2-201ENST00000267838 WDR17Q8IZU2 1322 aa26.17■■□□□ 1.78
LYSMD2-201ENST00000267838 KDM3BQ7LBC6 1761 aa26.16■■□□□ 1.78
LYSMD2-201ENST00000267838 TEFQ10587 303 aa26.16■■□□□ 1.78
LYSMD2-201ENST00000267838 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.16■■□□□ 1.78
LYSMD2-201ENST00000267838 ADAMTS7Q9UKP4 1686 aa26.16■■□□□ 1.78
LYSMD2-201ENST00000267838 API5Q9BZZ5 524 aaKnown RBP26.15■■□□□ 1.78
LYSMD2-201ENST00000267838 SPG7Q9UQ90 795 aa26.15■■□□□ 1.78
LYSMD2-201ENST00000267838 SOS1Q07889 1333 aaPredicted RBP26.15■■□□□ 1.78
LYSMD2-201ENST00000267838 PKD1L3Q7Z443 1732 aa26.14■■□□□ 1.77
LYSMD2-201ENST00000267838 ABCC4O15439 1325 aa26.13■■□□□ 1.77
LYSMD2-201ENST00000267838 IGHDP01880 384 aa26.12■■□□□ 1.77
LYSMD2-201ENST00000267838 PCDHB15Q9Y5E8 787 aa26.12■■□□□ 1.77
LYSMD2-201ENST00000267838 COL22A1Q8NFW1 1626 aaPredicted RBP26.12■■□□□ 1.77
LYSMD2-201ENST00000267838 TOM1L2Q6ZVM7 507 aa26.12■■□□□ 1.77
LYSMD2-201ENST00000267838 SIPA1L3O60292 1781 aaPredicted RBP26.11■■□□□ 1.77
LYSMD2-201ENST00000267838 BTBD11A6QL63 1104 aa26.1■■□□□ 1.77
LYSMD2-201ENST00000267838 PARP4Q9UKK3 1724 aaKnown RBP26.1■■□□□ 1.77
LYSMD2-201ENST00000267838 SLC4A2P04920 1241 aa26.1■■□□□ 1.77
LYSMD2-201ENST00000267838 PHKG2P15735 406 aa26.1■■□□□ 1.77
LYSMD2-201ENST00000267838 PTPRCP08575 1304 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms