RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 RICTORQ6R327 1708 aa20.85■□□□□ 0.93
RTN1-201ENST00000267484 CPSF1Q10570 1443 aaKnown RBP20.85■□□□□ 0.93
RTN1-201ENST00000267484 METP08581 1390 aa20.85■□□□□ 0.93
RTN1-201ENST00000267484 ATP10DQ9P241 1426 aa20.84■□□□□ 0.93
RTN1-201ENST00000267484 EIF4A2Q14240 407 aaKnown RBP20.84■□□□□ 0.93
RTN1-201ENST00000267484 SLC4A10Q6U841 1118 aa20.84■□□□□ 0.93
RTN1-201ENST00000267484 CDK12Q9NYV4 1490 aaPredicted RBP20.84■□□□□ 0.93
RTN1-201ENST00000267484 F6X3S4 739 aa20.84■□□□□ 0.93
RTN1-201ENST00000267484 KLHL40Q2TBA0 621 aa20.84■□□□□ 0.93
RTN1-201ENST00000267484 RGS12O14924 1447 aa20.82■□□□□ 0.92
RTN1-201ENST00000267484 RBM27Q9P2N5 1060 aaKnown RBP20.82■□□□□ 0.92
RTN1-201ENST00000267484 SLC4A2P04920 1241 aa20.82■□□□□ 0.92
RTN1-201ENST00000267484 CCDC61Q9Y6R9 512 aa20.82■□□□□ 0.92
RTN1-201ENST00000267484 RTL1A6NKG5 1358 aa20.81■□□□□ 0.92
RTN1-201ENST00000267484 FOXO3O43524 673 aa20.81■□□□□ 0.92
RTN1-201ENST00000267484 HSP90AB2PQ58FF8 381 aa20.81■□□□□ 0.92
RTN1-201ENST00000267484 G2E3Q7L622 706 aa20.81■□□□□ 0.92
RTN1-201ENST00000267484 PRPF40AO75400 957 aaKnown RBP20.8■□□□□ 0.92
RTN1-201ENST00000267484 LMBRD1Q9NUN5 540 aa20.8■□□□□ 0.92
RTN1-201ENST00000267484 PRR36Q9H6K5 1346 aa20.8■□□□□ 0.92
RTN1-201ENST00000267484 A2ML1A8K2U0 1454 aa20.8■□□□□ 0.92
RTN1-201ENST00000267484 PTMSP20962 102 aa20.79■□□□□ 0.92
RTN1-201ENST00000267484 AATKQ6ZMQ8 1374 aa20.79■□□□□ 0.92
RTN1-201ENST00000267484 CHL1O00533 1208 aa20.79■□□□□ 0.92
RTN1-201ENST00000267484 RPAP2Q8IXW5 612 aaPredicted RBP20.79■□□□□ 0.92
RTN1-201ENST00000267484 CLEC17AQ6ZS10 378 aa20.79■□□□□ 0.92
RTN1-201ENST00000267484 NOL8Q76FK4 1167 aaKnown RBP20.79■□□□□ 0.92
RTN1-201ENST00000267484 ZSCAN23Q3MJ62 389 aa20.78■□□□□ 0.92
RTN1-201ENST00000267484 ZDHHC9Q9Y397 364 aa20.78■□□□□ 0.92
RTN1-201ENST00000267484 EXOC6BQ9Y2D4 811 aa20.78■□□□□ 0.92
RTN1-201ENST00000267484 CYP2E1P05181 493 aaPredicted RBP20.77■□□□□ 0.92
RTN1-201ENST00000267484 NUCB2P80303 420 aa20.77■□□□□ 0.92
RTN1-201ENST00000267484 CCDC173Q0VFZ6 552 aa20.76■□□□□ 0.91
RTN1-201ENST00000267484 CASC1Q6TDU7 716 aa20.76■□□□□ 0.91
RTN1-201ENST00000267484 NECTIN2Q92692 538 aa20.76■□□□□ 0.91
RTN1-201ENST00000267484 RBSNQ9H1K0 784 aa20.76■□□□□ 0.91
RTN1-201ENST00000267484 ST18O60284 1047 aa20.76■□□□□ 0.91
RTN1-201ENST00000267484 NSFL1CQ9UNZ2 370 aaKnown RBP20.76■□□□□ 0.91
RTN1-201ENST00000267484 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.75■□□□□ 0.91
RTN1-201ENST00000267484 GPT2Q8TD30 523 aa20.75■□□□□ 0.91
RTN1-201ENST00000267484 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
RTN1-201ENST00000267484 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
RTN1-201ENST00000267484 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
RTN1-201ENST00000267484 PRIM1P49642 420 aaKnown RBP20.75■□□□□ 0.91
RTN1-201ENST00000267484 KIF24Q5T7B8 1368 aa20.74■□□□□ 0.91
RTN1-201ENST00000267484 ANP32BQ92688 251 aaKnown RBP20.74■□□□□ 0.91
RTN1-201ENST00000267484 PPP1R9BQ96SB3 815 aa20.74■□□□□ 0.91
RTN1-201ENST00000267484 DLC1Q96QB1 1528 aa20.74■□□□□ 0.91
RTN1-201ENST00000267484 FOXD4L6Q3SYB3 417 aaPredicted RBP20.74■□□□□ 0.91
RTN1-201ENST00000267484 FOXD4L3Q6VB84 417 aaPredicted RBP20.74■□□□□ 0.91
RTN1-201ENST00000267484 NEK4P51957 841 aa20.73■□□□□ 0.91
RTN1-201ENST00000267484 ERC2O15083 957 aa20.73■□□□□ 0.91
RTN1-201ENST00000267484 PDE1AP54750 535 aa20.73■□□□□ 0.91
RTN1-201ENST00000267484 HSP90AA2PQ14568 343 aaPredicted RBP20.73■□□□□ 0.91
RTN1-201ENST00000267484 CYB5RLQ6IPT4 315 aa20.73■□□□□ 0.91
RTN1-201ENST00000267484 REC8O95072 547 aa20.72■□□□□ 0.91
RTN1-201ENST00000267484 FAM69CQ0P6D2 419 aa20.71■□□□□ 0.91
RTN1-201ENST00000267484 ZNF445P59923 1031 aa20.71■□□□□ 0.91
RTN1-201ENST00000267484 TSPYL4Q9UJ04 414 aa20.71■□□□□ 0.91
RTN1-201ENST00000267484 PALD1Q9ULE6 856 aa20.71■□□□□ 0.91
RTN1-201ENST00000267484 TTC21BQ7Z4L5 1316 aa20.7■□□□□ 0.91
RTN1-201ENST00000267484 PTPRCP08575 1304 aa20.7■□□□□ 0.9
RTN1-201ENST00000267484 REREQ9P2R6 1566 aa20.7■□□□□ 0.9
RTN1-201ENST00000267484 ZSCAN30Q86W11 494 aa20.7■□□□□ 0.9
RTN1-201ENST00000267484 ACEP12821 1306 aa20.7■□□□□ 0.9
RTN1-201ENST00000267484 SETD1AO15047 1707 aaKnown RBP20.69■□□□□ 0.9
RTN1-201ENST00000267484 MTHFSDQ2M296 383 aaKnown RBP20.69■□□□□ 0.9
RTN1-201ENST00000267484 TMEM63CQ9P1W3 806 aa20.69■□□□□ 0.9
RTN1-201ENST00000267484 KIAA1211Q6ZU35 1233 aa20.69■□□□□ 0.9
RTN1-201ENST00000267484 SYCE3A1L190 88 aa20.69■□□□□ 0.9
RTN1-201ENST00000267484 RILPL2Q969X0 211 aa20.69■□□□□ 0.9
RTN1-201ENST00000267484 CWC22Q9HCG8 908 aaKnown RBP20.69■□□□□ 0.9
RTN1-201ENST00000267484 TMX3Q96JJ7 454 aa20.68■□□□□ 0.9
RTN1-201ENST00000267484 MAP3K19Q56UN5 1328 aa20.68■□□□□ 0.9
RTN1-201ENST00000267484 IBTKQ9P2D0 1353 aaPredicted RBP20.68■□□□□ 0.9
RTN1-201ENST00000267484 HMMRO75330 724 aa20.68■□□□□ 0.9
RTN1-201ENST00000267484 PNMA6EA0A0J9YXQ4 647 aa20.67■□□□□ 0.9
RTN1-201ENST00000267484 MSNP26038 577 aaKnown RBP20.67■□□□□ 0.9
RTN1-201ENST00000267484 TPRNQ4KMQ1 711 aa20.67■□□□□ 0.9
RTN1-201ENST00000267484 RNF214Q8ND24 703 aa20.67■□□□□ 0.9
RTN1-201ENST00000267484 TRIM6-TRIM34B2RNG4 842 aa20.67■□□□□ 0.9
RTN1-201ENST00000267484 KIAA0232Q92628 1395 aa20.66■□□□□ 0.9
RTN1-201ENST00000267484 CRB1P82279 1406 aa20.66■□□□□ 0.9
RTN1-201ENST00000267484 HAP1P54257 671 aaPredicted RBP20.66■□□□□ 0.9
RTN1-201ENST00000267484 UPF3BQ9BZI7 483 aaKnown RBP20.66■□□□□ 0.9
RTN1-201ENST00000267484 ANO2Q9NQ90 1003 aa20.66■□□□□ 0.9
RTN1-201ENST00000267484 ROBO2Q9HCK4 1378 aa20.66■□□□□ 0.9
RTN1-201ENST00000267484 NRXN3Q9Y4C0 1643 aa20.65■□□□□ 0.9
RTN1-201ENST00000267484 RTF1Q92541 710 aaKnown RBP20.65■□□□□ 0.9
RTN1-201ENST00000267484 UNC5CLQ8IV45 518 aa20.65■□□□□ 0.9
RTN1-201ENST00000267484 GNAI2P04899 355 aa20.64■□□□□ 0.89
RTN1-201ENST00000267484 GDPD2Q9HCC8 539 aa20.64■□□□□ 0.89
RTN1-201ENST00000267484 FKBP5Q13451 457 aaPredicted RBP20.63■□□□□ 0.89
RTN1-201ENST00000267484 ESYT1Q9BSJ8 1104 aa20.63■□□□□ 0.89
RTN1-201ENST00000267484 MON2Q7Z3U7 1717 aa20.63■□□□□ 0.89
RTN1-201ENST00000267484 C3P01024 1663 aa20.63■□□□□ 0.89
RTN1-201ENST00000267484 XPCQ01831 940 aaPredicted RBP20.63■□□□□ 0.89
RTN1-201ENST00000267484 IL25Q9H293 177 aa20.63■□□□□ 0.89
RTN1-201ENST00000267484 RIMS1Q86UR5 1692 aaKnown RBP20.62■□□□□ 0.89
RTN1-201ENST00000267484 MAP4K4O95819 1239 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms