RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 ERBB3P21860 1342 aa10.76□□□□□ -0.69
COPS4-201ENST00000264389 KIAA0232Q92628 1395 aa10.76□□□□□ -0.69
COPS4-201ENST00000264389 HAP1P54257 671 aaPredicted RBP10.75□□□□□ -0.69
COPS4-201ENST00000264389 GNAI1P63096 354 aa10.75□□□□□ -0.69
COPS4-201ENST00000264389 LRRC59Q96AG4 307 aaKnown RBP10.75□□□□□ -0.69
COPS4-201ENST00000264389 THUMPD2Q9BTF0 503 aaKnown RBP10.75□□□□□ -0.69
COPS4-201ENST00000264389 IFT57Q9NWB7 429 aa10.75□□□□□ -0.69
COPS4-201ENST00000264389 LAS1LQ9Y4W2 734 aaKnown RBP10.75□□□□□ -0.69
COPS4-201ENST00000264389 COL14A1Q05707 1796 aaKnown RBP10.75□□□□□ -0.69
COPS4-201ENST00000264389 FAM83GA6ND36 823 aa10.75□□□□□ -0.69
COPS4-201ENST00000264389 CT47B1P0C2W7 299 aaPredicted RBP10.75□□□□□ -0.69
COPS4-201ENST00000264389 MTHFSDQ2M296 383 aaKnown RBP10.75□□□□□ -0.69
COPS4-201ENST00000264389 NBPF6Q5VWK0 638 aa10.75□□□□□ -0.69
COPS4-201ENST00000264389 NBPF4Q96M43 638 aa10.75□□□□□ -0.69
COPS4-201ENST00000264389 PPP4R2Q9NY27 417 aa10.75□□□□□ -0.69
COPS4-201ENST00000264389 MAP3K5Q99683 1374 aa10.75□□□□□ -0.69
COPS4-201ENST00000264389 KDM3BQ7LBC6 1761 aa10.75□□□□□ -0.69
COPS4-201ENST00000264389 SCN11AQ9UI33 1791 aa10.74□□□□□ -0.69
COPS4-201ENST00000264389 PLCH1Q4KWH8 1693 aa10.74□□□□□ -0.69
COPS4-201ENST00000264389 PLIN1O60240 522 aa10.74□□□□□ -0.69
COPS4-201ENST00000264389 EXOSC9Q06265 439 aaKnown RBP10.74□□□□□ -0.69
COPS4-201ENST00000264389 RTF1Q92541 710 aaKnown RBP10.74□□□□□ -0.69
COPS4-201ENST00000264389 RNF39Q9H2S5 420 aa10.74□□□□□ -0.69
COPS4-201ENST00000264389 AXIN2Q9Y2T1 843 aa10.74□□□□□ -0.69
COPS4-201ENST00000264389 SIPA1L3O60292 1781 aaPredicted RBP10.74□□□□□ -0.69
COPS4-201ENST00000264389 CANXP27824 592 aaKnown RBP10.73□□□□□ -0.69
COPS4-201ENST00000264389 DCTN1Q14203 1278 aa10.73□□□□□ -0.69
COPS4-201ENST00000264389 WNK3Q9BYP7 1800 aa10.73□□□□□ -0.69
COPS4-201ENST00000264389 ADAMTS7Q9UKP4 1686 aa10.73□□□□□ -0.69
COPS4-201ENST00000264389 BCAR3O75815 825 aa10.72□□□□□ -0.69
COPS4-201ENST00000264389 CHRNA2Q15822 529 aa10.72□□□□□ -0.69
COPS4-201ENST00000264389 MCM10Q7L590 875 aa10.72□□□□□ -0.69
COPS4-201ENST00000264389 CFAP44Q96MT7 982 aa10.72□□□□□ -0.69
COPS4-201ENST00000264389 PRDM11Q9NQV5 511 aa10.72□□□□□ -0.69
COPS4-201ENST00000264389 COL5A2P05997 1499 aaPredicted RBP10.72□□□□□ -0.69
COPS4-201ENST00000264389 CRB1P82279 1406 aa10.72□□□□□ -0.69
COPS4-201ENST00000264389 ZNF853P0CG23 659 aa10.72□□□□□ -0.69
COPS4-201ENST00000264389 CSB-PGBD3P0DP91 1061 aa10.72□□□□□ -0.69
COPS4-201ENST00000264389 RARSP54136 660 aaKnown RBP10.72□□□□□ -0.69
COPS4-201ENST00000264389 MBIPQ9NS73 344 aa10.72□□□□□ -0.69
COPS4-201ENST00000264389 GNAT3A8MTJ3 354 aa10.71□□□□□ -0.69
COPS4-201ENST00000264389 HTATSF1O43719 755 aaKnown RBP10.71□□□□□ -0.69
COPS4-201ENST00000264389 CACNA1FO60840 1977 aa10.71□□□□□ -0.7
COPS4-201ENST00000264389 MEGF6O75095 1541 aa10.7□□□□□ -0.7
COPS4-201ENST00000264389 PELP1Q8IZL8 1130 aaKnown RBP10.7□□□□□ -0.7
COPS4-201ENST00000264389 NLRP2Q9NX02 1062 aa10.7□□□□□ -0.7
COPS4-201ENST00000264389 SHANK3Q9BYB0 1731 aa10.7□□□□□ -0.7
COPS4-201ENST00000264389 PLEKHG2Q9H7P9 1386 aa10.7□□□□□ -0.7
COPS4-201ENST00000264389 TOM1O60784 492 aa10.7□□□□□ -0.7
COPS4-201ENST00000264389 AMOTQ4VCS5 1084 aa10.7□□□□□ -0.7
COPS4-201ENST00000264389 PLEKHO1Q53GL0 409 aaPredicted RBP10.7□□□□□ -0.7
COPS4-201ENST00000264389 EXOC6Q8TAG9 804 aa10.7□□□□□ -0.7
COPS4-201ENST00000264389 CRBNQ96SW2 442 aa10.7□□□□□ -0.7
COPS4-201ENST00000264389 BCL2L13Q9BXK5 485 aa10.7□□□□□ -0.7
COPS4-201ENST00000264389 SMC4Q9NTJ3 1288 aa10.7□□□□□ -0.7
COPS4-201ENST00000264389 OVOS2A0A0G2JMS6 1433 aa10.69□□□□□ -0.7
COPS4-201ENST00000264389 NRAPQ86VF7 1730 aa10.69□□□□□ -0.7
COPS4-201ENST00000264389 C20orf194Q5TEA3 1177 aa10.69□□□□□ -0.7
COPS4-201ENST00000264389 ZNF530Q6P9A1 599 aaPredicted RBP10.69□□□□□ -0.7
COPS4-201ENST00000264389 RAPGEF4Q8WZA2 1011 aa10.69□□□□□ -0.7
COPS4-201ENST00000264389 FRAT1Q92837 279 aaPredicted RBP10.69□□□□□ -0.7
COPS4-201ENST00000264389 C1orf141Q5JVX7 400 aa10.68□□□□□ -0.7
COPS4-201ENST00000264389 B4GALNT3Q6L9W6 998 aa10.68□□□□□ -0.7
COPS4-201ENST00000264389 ZNF428Q96B54 188 aa10.68□□□□□ -0.7
COPS4-201ENST00000264389 WDR17Q8IZU2 1322 aa10.68□□□□□ -0.7
COPS4-201ENST00000264389 KIF16BQ96L93 1317 aa10.68□□□□□ -0.7
COPS4-201ENST00000264389 NWD2Q9ULI1 1742 aa10.68□□□□□ -0.7
COPS4-201ENST00000264389 TATP17735 454 aaPredicted RBP10.67□□□□□ -0.7
COPS4-201ENST00000264389 ALDH1L2Q3SY69 923 aa10.67□□□□□ -0.7
COPS4-201ENST00000264389 AKAP4Q5JQC9 854 aa10.67□□□□□ -0.7
COPS4-201ENST00000264389 CCDC136Q96JN2 1154 aa10.67□□□□□ -0.7
COPS4-201ENST00000264389 CHL1O00533 1208 aa10.67□□□□□ -0.7
COPS4-201ENST00000264389 TWISTNBQ3B726 338 aaPredicted RBP10.67□□□□□ -0.7
COPS4-201ENST00000264389 SSH1Q8WYL5 1049 aa10.67□□□□□ -0.7
COPS4-201ENST00000264389 TSPYL4Q9UJ04 414 aa10.67□□□□□ -0.7
COPS4-201ENST00000264389 CEMIPQ8WUJ3 1361 aa10.66□□□□□ -0.7
COPS4-201ENST00000264389 PIP4K2BP78356 416 aa10.66□□□□□ -0.7
COPS4-201ENST00000264389 PDE3AQ14432 1141 aa10.66□□□□□ -0.7
COPS4-201ENST00000264389 TOM1L2Q6ZVM7 507 aa10.66□□□□□ -0.7
COPS4-201ENST00000264389 ZKSCAN2Q63HK3 967 aa10.65□□□□□ -0.7
COPS4-201ENST00000264389 TSPYL6Q8N831 410 aa10.65□□□□□ -0.7
COPS4-201ENST00000264389 N4BP2Q86UW6 1770 aaPredicted RBP10.65□□□□□ -0.7
COPS4-201ENST00000264389 MRC1P22897 1456 aa10.64□□□□□ -0.71
COPS4-201ENST00000264389 UBAP1LF5GYI3 381 aa10.64□□□□□ -0.71
COPS4-201ENST00000264389 ELL2O00472 640 aaPredicted RBP10.64□□□□□ -0.71
COPS4-201ENST00000264389 VAMP4O75379 141 aa10.64□□□□□ -0.71
COPS4-201ENST00000264389 FTSJ3Q8IY81 847 aaKnown RBP10.64□□□□□ -0.71
COPS4-201ENST00000264389 C8orf58Q8NAV2 365 aa10.64□□□□□ -0.71
COPS4-201ENST00000264389 IL17REQ8NFR9 667 aa10.64□□□□□ -0.71
COPS4-201ENST00000264389 MS4A1P11836 297 aa10.64□□□□□ -0.71
COPS4-201ENST00000264389 STRN4Q9NRL3 753 aa10.64□□□□□ -0.71
COPS4-201ENST00000264389 BABAM1Q9NWV8 329 aa10.64□□□□□ -0.71
COPS4-201ENST00000264389 SPG7Q9UQ90 795 aa10.64□□□□□ -0.71
COPS4-201ENST00000264389 EVA1CP58658 441 aa10.63□□□□□ -0.71
COPS4-201ENST00000264389 TEFQ10587 303 aa10.63□□□□□ -0.71
COPS4-201ENST00000264389 TAF7Q15545 349 aaPredicted RBP10.63□□□□□ -0.71
COPS4-201ENST00000264389 PANK1Q8TE04 598 aa10.63□□□□□ -0.71
COPS4-201ENST00000264389 MIS18AQ9NYP9 233 aa10.63□□□□□ -0.71
COPS4-201ENST00000264389 C5P01031 1676 aa10.63□□□□□ -0.71
COPS4-201ENST00000264389 TOGARAM1Q9Y4F4 1720 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms