RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 KIAA1328Q86T90 577 aa20.5■□□□□ 0.87
NOTCH3-201ENST00000263388 LRRFIP2Q9Y608 721 aaKnown RBP20.5■□□□□ 0.87
NOTCH3-201ENST00000263388 MAP3K11Q16584 847 aa20.49■□□□□ 0.87
NOTCH3-201ENST00000263388 CCDC141Q6ZP82 1450 aa20.49■□□□□ 0.87
NOTCH3-201ENST00000263388 EPB41L2O43491 1005 aaKnown RBP20.49■□□□□ 0.87
NOTCH3-201ENST00000263388 SOGA3Q5TF21 947 aa20.49■□□□□ 0.87
NOTCH3-201ENST00000263388 NKTRP30414 1462 aaKnown RBP20.49■□□□□ 0.87
NOTCH3-201ENST00000263388 BCAR3O75815 825 aa20.49■□□□□ 0.87
NOTCH3-201ENST00000263388 ATP2B2Q01814 1243 aa20.49■□□□□ 0.87
NOTCH3-201ENST00000263388 SLC26A8Q96RN1 970 aa20.49■□□□□ 0.87
NOTCH3-201ENST00000263388 PDRG1Q9NUG6 133 aa20.49■□□□□ 0.87
NOTCH3-201ENST00000263388 TSR2Q969E8 191 aaKnown RBP20.49■□□□□ 0.87
NOTCH3-201ENST00000263388 PRAM1Q96QH2 718 aa20.49■□□□□ 0.87
NOTCH3-201ENST00000263388 MCM3P25205 808 aa20.48■□□□□ 0.87
NOTCH3-201ENST00000263388 ESPNB1AK53 854 aa20.48■□□□□ 0.87
NOTCH3-201ENST00000263388 CCDC148Q8NFR7 591 aa20.48■□□□□ 0.87
NOTCH3-201ENST00000263388 MAP9Q49MG5 647 aa20.48■□□□□ 0.87
NOTCH3-201ENST00000263388 AACSQ86V21 672 aa20.48■□□□□ 0.87
NOTCH3-201ENST00000263388 SIL1Q9H173 461 aa20.47■□□□□ 0.87
NOTCH3-201ENST00000263388 ZHX3Q9H4I2 956 aa20.47■□□□□ 0.87
NOTCH3-201ENST00000263388 MCM4P33991 863 aa20.47■□□□□ 0.87
NOTCH3-201ENST00000263388 UBAC1Q9BSL1 405 aa20.47■□□□□ 0.87
NOTCH3-201ENST00000263388 FKBP4Q02790 459 aaKnown RBP eCLIP20.47■□□□□ 0.87
NOTCH3-201ENST00000263388 SULT6B1Q6IMI4 303 aa20.47■□□□□ 0.87
NOTCH3-201ENST00000263388 CABP4P57796 275 aa20.46■□□□□ 0.87
NOTCH3-201ENST00000263388 FAM69CQ0P6D2 419 aa20.46■□□□□ 0.87
NOTCH3-201ENST00000263388 JAKMIP3Q5VZ66 844 aa20.46■□□□□ 0.87
NOTCH3-201ENST00000263388 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
NOTCH3-201ENST00000263388 ESCO1Q5FWF5 840 aa20.46■□□□□ 0.87
NOTCH3-201ENST00000263388 CASTP20810 708 aaKnown RBP20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 GBP3Q9H0R5 595 aa20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 SRGAP3O43295 1099 aa20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 TRIM21P19474 475 aaKnown RBP20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 IMMTQ16891 758 aaKnown RBP20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 CWC27Q6UX04 472 aaKnown RBP20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 EPRSP07814 1512 aaKnown RBP20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 SPG7Q9UQ90 795 aa20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 DAPK1P53355 1430 aa20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 TDO2P48775 406 aa20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 CDK19Q9BWU1 502 aa20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 NUP133Q8WUM0 1156 aa20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 JAKMIP1Q96N16 626 aaKnown RBP20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 U3KPZ7 1027 aaPredicted RBP20.45■□□□□ 0.86
NOTCH3-201ENST00000263388 ARHGAP29Q52LW3 1261 aa20.44■□□□□ 0.86
NOTCH3-201ENST00000263388 CCDC91Q7Z6B0 441 aa20.44■□□□□ 0.86
NOTCH3-201ENST00000263388 TAX1BP1Q86VP1 789 aa20.44■□□□□ 0.86
NOTCH3-201ENST00000263388 CTTNBP2Q8WZ74 1663 aa20.44■□□□□ 0.86
NOTCH3-201ENST00000263388 PPP1R12BO60237 982 aaPredicted RBP20.44■□□□□ 0.86
NOTCH3-201ENST00000263388 CFAP70Q5T0N1 1121 aa20.44■□□□□ 0.86
NOTCH3-201ENST00000263388 ATAD2Q6PL18 1390 aa20.43■□□□□ 0.86
NOTCH3-201ENST00000263388 GIMAP7Q8NHV1 300 aa20.43■□□□□ 0.86
NOTCH3-201ENST00000263388 UBXN4Q92575 508 aa20.43■□□□□ 0.86
NOTCH3-201ENST00000263388 MAP4K4O95819 1239 aaPredicted RBP20.43■□□□□ 0.86
NOTCH3-201ENST00000263388 CRACR2AQ9BSW2 395 aa20.43■□□□□ 0.86
NOTCH3-201ENST00000263388 ZNF287Q9HBT7 754 aa20.43■□□□□ 0.86
NOTCH3-201ENST00000263388 PCF11O94913 1555 aaKnown RBP20.42■□□□□ 0.86
NOTCH3-201ENST00000263388 BTBD11A6QL63 1104 aa20.42■□□□□ 0.86
NOTCH3-201ENST00000263388 RAB11FIP3O75154 756 aa20.42■□□□□ 0.86
NOTCH3-201ENST00000263388 ZSCAN30Q86W11 494 aa20.42■□□□□ 0.86
NOTCH3-201ENST00000263388 EIF5P55010 431 aaKnown RBP20.42■□□□□ 0.86
NOTCH3-201ENST00000263388 CFAP100Q494V2 611 aa20.42■□□□□ 0.86
NOTCH3-201ENST00000263388 CCDC102AQ96A19 550 aa20.42■□□□□ 0.86
NOTCH3-201ENST00000263388 MYL6BP14649 208 aa20.42■□□□□ 0.86
NOTCH3-201ENST00000263388 ZSCAN12O43309 604 aa20.41■□□□□ 0.86
NOTCH3-201ENST00000263388 FAM193AP78312 1265 aa20.41■□□□□ 0.86
NOTCH3-201ENST00000263388 RTEL1-TNFRSF6BF6WH68 1400 aa20.41■□□□□ 0.86
NOTCH3-201ENST00000263388 KIF18AQ8NI77 898 aa20.41■□□□□ 0.86
NOTCH3-201ENST00000263388 CCDC183Q5T5S1 534 aa20.41■□□□□ 0.86
NOTCH3-201ENST00000263388 RBM42Q9BTD8 480 aaKnown RBP20.41■□□□□ 0.86
NOTCH3-201ENST00000263388 IQGAP2Q13576 1575 aa20.41■□□□□ 0.86
NOTCH3-201ENST00000263388 SFPQP23246 707 aaKnown RBP eCLIP20.41■□□□□ 0.86
NOTCH3-201ENST00000263388 DDX11Q96FC9 970 aa20.41■□□□□ 0.86
NOTCH3-201ENST00000263388 SEPT11Q9NVA2 429 aaKnown RBP20.41■□□□□ 0.86
NOTCH3-201ENST00000263388 SYCE3A1L190 88 aa20.4■□□□□ 0.86
NOTCH3-201ENST00000263388 FAM177BA6PVY3 158 aa20.4■□□□□ 0.86
NOTCH3-201ENST00000263388 POTEJP0CG39 1038 aa20.4■□□□□ 0.86
NOTCH3-201ENST00000263388 TAF4BQ92750 862 aa20.4■□□□□ 0.86
NOTCH3-201ENST00000263388 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.86
NOTCH3-201ENST00000263388 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.85
NOTCH3-201ENST00000263388 PTPN14Q15678 1187 aa20.39■□□□□ 0.85
NOTCH3-201ENST00000263388 FCHSD2O94868 740 aa20.39■□□□□ 0.85
NOTCH3-201ENST00000263388 ANKRD30BQ9BXX2 1392 aa20.39■□□□□ 0.85
NOTCH3-201ENST00000263388 ZNF530Q6P9A1 599 aaPredicted RBP20.39■□□□□ 0.85
NOTCH3-201ENST00000263388 SLC52A1Q9NWF4 448 aa20.39■□□□□ 0.85
NOTCH3-201ENST00000263388 KLHL34Q8N239 644 aa20.38■□□□□ 0.85
NOTCH3-201ENST00000263388 DNAI2Q9GZS0 605 aa20.38■□□□□ 0.85
NOTCH3-201ENST00000263388 KIF5CO60282 957 aa20.38■□□□□ 0.85
NOTCH3-201ENST00000263388 CETN2P41208 172 aa20.38■□□□□ 0.85
NOTCH3-201ENST00000263388 FILIP1Q7Z7B0 1213 aa20.38■□□□□ 0.85
NOTCH3-201ENST00000263388 IL27Q8NEV9 243 aa20.38■□□□□ 0.85
NOTCH3-201ENST00000263388 CASQ1P31415 396 aa20.38■□□□□ 0.85
NOTCH3-201ENST00000263388 TMCO3Q6UWJ1 677 aa20.38■□□□□ 0.85
NOTCH3-201ENST00000263388 SLC12A5Q9H2X9 1139 aa20.38■□□□□ 0.85
NOTCH3-201ENST00000263388 SCAND2PQ9GZW5 306 aaPredicted RBP20.38■□□□□ 0.85
NOTCH3-201ENST00000263388 FGFR1OPO95684 399 aaKnown RBP20.38■□□□□ 0.85
NOTCH3-201ENST00000263388 RPAP2Q8IXW5 612 aaPredicted RBP20.37■□□□□ 0.85
NOTCH3-201ENST00000263388 CTAGE5O15320 804 aa20.37■□□□□ 0.85
NOTCH3-201ENST00000263388 SPA17Q15506 151 aa20.37■□□□□ 0.85
NOTCH3-201ENST00000263388 KIF1BPQ96EK5 621 aa20.37■□□□□ 0.85
NOTCH3-201ENST00000263388 CEP126Q9P2H0 1117 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms