RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 RUFY1Q96T51 708 aa14.44□□□□□ -0.1
SPG11-201ENST00000261866 UBAC1Q9BSL1 405 aa14.44□□□□□ -0.1
SPG11-201ENST00000261866 SEPT11Q9NVA2 429 aaKnown RBP14.44□□□□□ -0.1
SPG11-201ENST00000261866 ME1P48163 572 aa14.44□□□□□ -0.1
SPG11-201ENST00000261866 AIDAQ96BJ3 306 aa14.43□□□□□ -0.1
SPG11-201ENST00000261866 NAT10Q9H0A0 1025 aaKnown RBP14.43□□□□□ -0.1
SPG11-201ENST00000261866 PDCL3Q9H2J4 239 aa14.43□□□□□ -0.1
SPG11-201ENST00000261866 ATF7IPQ6VMQ6 1270 aa14.43□□□□□ -0.1
SPG11-201ENST00000261866 ANKRD62A6NC57 917 aa14.43□□□□□ -0.1
SPG11-201ENST00000261866 TMEM57Q8N5G2 664 aa14.43□□□□□ -0.1
SPG11-201ENST00000261866 MNS1Q8NEH6 495 aa14.43□□□□□ -0.1
SPG11-201ENST00000261866 POLR3DP05423 398 aaPredicted RBP14.43□□□□□ -0.1
SPG11-201ENST00000261866 GCC1Q96CN9 775 aa14.43□□□□□ -0.1
SPG11-201ENST00000261866 CRACR2BQ8N4Y2 399 aaPredicted RBP14.43□□□□□ -0.1
SPG11-201ENST00000261866 BOLA2Q9H3K6 86 aa14.43□□□□□ -0.1
SPG11-201ENST00000261866 CCDC61Q9Y6R9 512 aa14.43□□□□□ -0.1
SPG11-201ENST00000261866 CALRP27797 417 aaKnown RBP14.42□□□□□ -0.1
SPG11-201ENST00000261866 SYCP1Q15431 976 aa14.42□□□□□ -0.1
SPG11-201ENST00000261866 TRIM22Q8IYM9 498 aa14.42□□□□□ -0.1
SPG11-201ENST00000261866 TRMT112Q9UI30 125 aaKnown RBP14.42□□□□□ -0.1
SPG11-201ENST00000261866 LARP6Q9BRS8 491 aaKnown RBP14.42□□□□□ -0.1
SPG11-201ENST00000261866 C11orf95C9JLR9 678 aaPredicted RBP14.42□□□□□ -0.1
SPG11-201ENST00000261866 NFKBIBQ15653 356 aa14.42□□□□□ -0.1
SPG11-201ENST00000261866 TMPOP42166 694 aaKnown RBP14.42□□□□□ -0.1
SPG11-201ENST00000261866 CCDC97Q96F63 343 aaPredicted RBP14.42□□□□□ -0.1
SPG11-201ENST00000261866 CCDC8Q9H0W5 538 aaPredicted RBP14.42□□□□□ -0.1
SPG11-201ENST00000261866 PHF8Q9UPP1 1060 aa14.42□□□□□ -0.1
SPG11-201ENST00000261866 DHX8Q14562 1220 aaKnown RBP14.41□□□□□ -0.1
SPG11-201ENST00000261866 CHD1LQ86WJ1 897 aa14.41□□□□□ -0.1
SPG11-201ENST00000261866 NFE2L2Q16236 605 aa14.41□□□□□ -0.1
SPG11-201ENST00000261866 KRT28Q7Z3Y7 464 aa14.41□□□□□ -0.1
SPG11-201ENST00000261866 RPGRQ92834 1020 aaKnown RBP14.41□□□□□ -0.1
SPG11-201ENST00000261866 MAP7D2Q96T17 732 aa14.41□□□□□ -0.1
SPG11-201ENST00000261866 HFM1A2PYH4 1435 aa14.41□□□□□ -0.1
SPG11-201ENST00000261866 PPFIA3O75145 1194 aa14.41□□□□□ -0.1
SPG11-201ENST00000261866 GPS2Q13227 327 aa14.41□□□□□ -0.1
SPG11-201ENST00000261866 MVPQ14764 893 aaKnown RBP14.41□□□□□ -0.1
SPG11-201ENST00000261866 PDRG1Q9NUG6 133 aa14.41□□□□□ -0.1
SPG11-201ENST00000261866 KCNH5Q8NCM2 988 aa14.41□□□□□ -0.1
SPG11-201ENST00000261866 ZNF622Q969S3 477 aaKnown RBP eCLIP14.41□□□□□ -0.12e-6■■□□□ 11.9
SPG11-201ENST00000261866 ATP5J2-PTCD1G3V325 749 aa14.4□□□□□ -0.1
SPG11-201ENST00000261866 ZNF396Q96N95 335 aaPredicted RBP14.4□□□□□ -0.1
SPG11-201ENST00000261866 PLB1Q6P1J6 1458 aa14.4□□□□□ -0.1
SPG11-201ENST00000261866 FAM177A1Q8N128 213 aaPredicted RBP14.4□□□□□ -0.1
SPG11-201ENST00000261866 PLEKHH2Q8IVE3 1493 aa14.4□□□□□ -0.1
SPG11-201ENST00000261866 ADGRF5Q8IZF2 1346 aa14.4□□□□□ -0.1
SPG11-201ENST00000261866 PIP4K2AP48426 406 aaPredicted RBP14.39□□□□□ -0.11
SPG11-201ENST00000261866 ZSCAN25Q6NSZ9 544 aa14.39□□□□□ -0.11
SPG11-201ENST00000261866 TMOD2Q9NZR1 351 aa14.39□□□□□ -0.11
SPG11-201ENST00000261866 SERPINC1P01008 464 aa14.39□□□□□ -0.11
SPG11-201ENST00000261866 TAF7Q15545 349 aaPredicted RBP14.39□□□□□ -0.11
SPG11-201ENST00000261866 NASPP49321 788 aaPredicted RBP14.39□□□□□ -0.11
SPG11-201ENST00000261866 LARP1BQ659C4 914 aaKnown RBP14.39□□□□□ -0.11
SPG11-201ENST00000261866 C6orf229H3BNL8 230 aa14.39□□□□□ -0.11
SPG11-201ENST00000261866 CASTP20810 708 aaKnown RBP14.39□□□□□ -0.11
SPG11-201ENST00000261866 DZIP1Q86YF9 867 aaKnown RBP14.39□□□□□ -0.11
SPG11-201ENST00000261866 EXOC5O00471 708 aa14.39□□□□□ -0.11
SPG11-201ENST00000261866 CAVIN4Q5BKX8 364 aa14.38□□□□□ -0.11
SPG11-201ENST00000261866 ZNF652Q9Y2D9 606 aa14.38□□□□□ -0.11
SPG11-201ENST00000261866 NEFHP12036 1026 aa14.38□□□□□ -0.11
SPG11-201ENST00000261866 ANXA1P04083 346 aa14.38□□□□□ -0.11
SPG11-201ENST00000261866 LIG1P18858 919 aa14.38□□□□□ -0.11
SPG11-201ENST00000261866 MKNK2Q9HBH9 465 aa14.38□□□□□ -0.11
SPG11-201ENST00000261866 EPRSP07814 1512 aaKnown RBP14.38□□□□□ -0.11
SPG11-201ENST00000261866 ATAD2Q6PL18 1390 aa14.38□□□□□ -0.11
SPG11-201ENST00000261866 FAM83GA6ND36 823 aa14.38□□□□□ -0.11
SPG11-201ENST00000261866 GUCY1B3Q02153 619 aa14.38□□□□□ -0.11
SPG11-201ENST00000261866 SCLT1Q96NL6 688 aa14.38□□□□□ -0.11
SPG11-201ENST00000261866 C8orf37Q96NL8 207 aa14.38□□□□□ -0.11
SPG11-201ENST00000261866 SUPT6HQ7KZ85 1726 aaKnown RBP14.37□□□□□ -0.11
SPG11-201ENST00000261866 AK7Q96M32 723 aa14.37□□□□□ -0.11
SPG11-201ENST00000261866 TRAK2O60296 914 aa14.37□□□□□ -0.11
SPG11-201ENST00000261866 BLOC1S2Q6QNY1 142 aa14.37□□□□□ -0.11
SPG11-201ENST00000261866 FCHSD2O94868 740 aa14.37□□□□□ -0.11
SPG11-201ENST00000261866 ADGRL1O94910 1474 aa14.37□□□□□ -0.11
SPG11-201ENST00000261866 TSPY26PQ9H489 355 aa14.37□□□□□ -0.11
SPG11-201ENST00000261866 RAB11FIP4Q86YS3 637 aa14.37□□□□□ -0.11
SPG11-201ENST00000261866 FILIP1LQ4L180 1135 aa14.36□□□□□ -0.11
SPG11-201ENST00000261866 WDR63Q8IWG1 891 aa14.36□□□□□ -0.11
SPG11-201ENST00000261866 CCDC144CPQ8IYA2 1237 aa14.36□□□□□ -0.11
SPG11-201ENST00000261866 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
SPG11-201ENST00000261866 RANBP6O60518 1105 aaKnown RBP14.36□□□□□ -0.11
SPG11-201ENST00000261866 CCDC96Q2M329 555 aa14.36□□□□□ -0.11
SPG11-201ENST00000261866 IDI1Q13907 227 aa14.36□□□□□ -0.11
SPG11-201ENST00000261866 CABLES1Q8TDN4 633 aa14.36□□□□□ -0.11
SPG11-201ENST00000261866 PRPF40BQ6NWY9 871 aaKnown RBP14.36□□□□□ -0.11
SPG11-201ENST00000261866 RABEP1Q15276 862 aa14.35□□□□□ -0.11
SPG11-201ENST00000261866 CAMK4Q16566 473 aa14.35□□□□□ -0.11
SPG11-201ENST00000261866 UBAP1LF5GYI3 381 aa14.35□□□□□ -0.11
SPG11-201ENST00000261866 IFIT1P09914 478 aaKnown RBP14.35□□□□□ -0.11
SPG11-201ENST00000261866 SNRKQ9NRH2 765 aa14.35□□□□□ -0.11
SPG11-201ENST00000261866 TTC16Q8NEE8 873 aa14.35□□□□□ -0.11
SPG11-201ENST00000261866 TNMDQ9H2S6 317 aa14.35□□□□□ -0.11
SPG11-201ENST00000261866 DEF6Q9H4E7 631 aa14.35□□□□□ -0.11
SPG11-201ENST00000261866 RPGRIP1LQ68CZ1 1315 aa14.35□□□□□ -0.11
SPG11-201ENST00000261866 IFIT5Q13325 482 aaKnown RBP14.35□□□□□ -0.11
SPG11-201ENST00000261866 IMMTQ16891 758 aaKnown RBP14.35□□□□□ -0.11
SPG11-201ENST00000261866 TSHZ3Q63HK5 1081 aa14.35□□□□□ -0.11
SPG11-201ENST00000261866 FERMT3Q86UX7 667 aa14.35□□□□□ -0.11
SPG11-201ENST00000261866 ANKRD30BQ9BXX2 1392 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms