RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 KCNQ2O43526 872 aa12.81□□□□□ -0.36
LIN7A-201ENST00000261203 CGNL1Q0VF96 1302 aa12.81□□□□□ -0.36
LIN7A-201ENST00000261203 CASZ1Q86V15 1759 aa12.81□□□□□ -0.36
LIN7A-201ENST00000261203 TXNRD1Q16881 649 aa12.8□□□□□ -0.36
LIN7A-201ENST00000261203 PROM2Q8N271 834 aa12.8□□□□□ -0.36
LIN7A-201ENST00000261203 ACSBG1Q96GR2 724 aa12.8□□□□□ -0.36
LIN7A-201ENST00000261203 SPON1Q9HCB6 807 aa12.8□□□□□ -0.36
LIN7A-201ENST00000261203 DOT1LQ8TEK3 1739 aa12.79□□□□□ -0.36
LIN7A-201ENST00000261203 MEGF6O75095 1541 aa12.79□□□□□ -0.36
LIN7A-201ENST00000261203 ZCRB1Q8TBF4 217 aaKnown RBP12.79□□□□□ -0.36
LIN7A-201ENST00000261203 DDX54Q8TDD1 881 aaKnown RBP12.79□□□□□ -0.36
LIN7A-201ENST00000261203 ANO8Q9HCE9 1232 aaPredicted RBP12.79□□□□□ -0.36
LIN7A-201ENST00000261203 UTRNP46939 3433 aa12.78□□□□□ -0.36
LIN7A-201ENST00000261203 HSPA5P11021 654 aaKnown RBP12.78□□□□□ -0.36
LIN7A-201ENST00000261203 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
LIN7A-201ENST00000261203 RAPGEF4Q8WZA2 1011 aa12.78□□□□□ -0.36
LIN7A-201ENST00000261203 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
LIN7A-201ENST00000261203 POLR3GLQ9BT43 218 aa12.78□□□□□ -0.36
LIN7A-201ENST00000261203 STK32BQ9NY57 414 aa12.78□□□□□ -0.36
LIN7A-201ENST00000261203 HSP90AB2PQ58FF8 381 aa12.77□□□□□ -0.37
LIN7A-201ENST00000261203 PAPPAQ13219 1627 aa12.77□□□□□ -0.37
LIN7A-201ENST00000261203 LY75O60449 1722 aa12.75□□□□□ -0.37
LIN7A-201ENST00000261203 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
LIN7A-201ENST00000261203 SLC15A2Q16348 729 aa12.75□□□□□ -0.37
LIN7A-201ENST00000261203 PKD1L3Q7Z443 1732 aa12.75□□□□□ -0.37
LIN7A-201ENST00000261203 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
LIN7A-201ENST00000261203 EMILIN1Q9Y6C2 1016 aa12.75□□□□□ -0.37
LIN7A-201ENST00000261203 QSER1Q2KHR3 1735 aa12.74□□□□□ -0.37
LIN7A-201ENST00000261203 NSD2O96028 1365 aa12.74□□□□□ -0.37
LIN7A-201ENST00000261203 WASHC2AQ641Q2 1341 aa12.74□□□□□ -0.37
LIN7A-201ENST00000261203 PCDH11XQ9BZA7 1347 aa12.74□□□□□ -0.37
LIN7A-201ENST00000261203 PCDH11YQ9BZA8 1340 aa12.74□□□□□ -0.37
LIN7A-201ENST00000261203 PPP1R1BQ9UD71 204 aaPredicted RBP12.74□□□□□ -0.37
LIN7A-201ENST00000261203 NCAPD2Q15021 1401 aa12.73□□□□□ -0.37
LIN7A-201ENST00000261203 PPM1GO15355 546 aaPredicted RBP12.73□□□□□ -0.37
LIN7A-201ENST00000261203 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
LIN7A-201ENST00000261203 SLC27A3Q5K4L6 730 aa12.73□□□□□ -0.37
LIN7A-201ENST00000261203 SYTL4Q96C24 671 aaPredicted RBP12.73□□□□□ -0.37
LIN7A-201ENST00000261203 PDGFDQ9GZP0 370 aaPredicted RBP12.72□□□□□ -0.37
LIN7A-201ENST00000261203 PANK3Q9H999 370 aa12.72□□□□□ -0.37
LIN7A-201ENST00000261203 POLKQ9UBT6 870 aa12.72□□□□□ -0.37
LIN7A-201ENST00000261203 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.37
LIN7A-201ENST00000261203 PTGER2P43116 358 aa12.71□□□□□ -0.37
LIN7A-201ENST00000261203 ITGB4P16144 1822 aa12.71□□□□□ -0.38
LIN7A-201ENST00000261203 ZBTB7AO95365 584 aa12.7□□□□□ -0.38
LIN7A-201ENST00000261203 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
LIN7A-201ENST00000261203 PLEKHG2Q9H7P9 1386 aa12.69□□□□□ -0.38
LIN7A-201ENST00000261203 TUBGCP6Q96RT7 1819 aa12.69□□□□□ -0.38
LIN7A-201ENST00000261203 HMGB2P26583 209 aaKnown RBP12.69□□□□□ -0.38
LIN7A-201ENST00000261203 ZNF784Q8NCA9 323 aaPredicted RBP12.69□□□□□ -0.38
LIN7A-201ENST00000261203 MTFR1LQ9H019 292 aa12.69□□□□□ -0.38
LIN7A-201ENST00000261203 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
LIN7A-201ENST00000261203 TOGARAM1Q9Y4F4 1720 aa12.68□□□□□ -0.38
LIN7A-201ENST00000261203 TNNT2P45379 298 aaPredicted RBP12.68□□□□□ -0.38
LIN7A-201ENST00000261203 ZNF827Q17R98 1081 aa12.68□□□□□ -0.38
LIN7A-201ENST00000261203 EYA1Q99502 592 aa12.68□□□□□ -0.38
LIN7A-201ENST00000261203 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.68□□□□□ -0.38
LIN7A-201ENST00000261203 TAF1LQ8IZX4 1826 aa12.67□□□□□ -0.38
LIN7A-201ENST00000261203 CYP27B1O15528 508 aa12.67□□□□□ -0.38
LIN7A-201ENST00000261203 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
LIN7A-201ENST00000261203 SGIP1Q9BQI5 828 aa12.67□□□□□ -0.38
LIN7A-201ENST00000261203 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
LIN7A-201ENST00000261203 KNSTRNQ9Y448 316 aa12.67□□□□□ -0.38
LIN7A-201ENST00000261203 C5P01031 1676 aa12.67□□□□□ -0.38
LIN7A-201ENST00000261203 COL24A1Q17RW2 1714 aa12.66□□□□□ -0.38
LIN7A-201ENST00000261203 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
LIN7A-201ENST00000261203 NKX1-1Q15270 411 aaPredicted RBP12.66□□□□□ -0.38
LIN7A-201ENST00000261203 MORC1Q86VD1 984 aa12.66□□□□□ -0.38
LIN7A-201ENST00000261203 SLC16A10Q8TF71 515 aa12.66□□□□□ -0.38
LIN7A-201ENST00000261203 SYT17Q9BSW7 474 aa12.66□□□□□ -0.38
LIN7A-201ENST00000261203 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
LIN7A-201ENST00000261203 TFCP2L1Q9NZI6 479 aa12.65□□□□□ -0.38
LIN7A-201ENST00000261203 KIF7Q2M1P5 1343 aa12.64□□□□□ -0.39
LIN7A-201ENST00000261203 IGSF1Q8N6C5 1336 aa12.64□□□□□ -0.39
LIN7A-201ENST00000261203 MPRIPQ6WCQ1 1025 aa12.64□□□□□ -0.39
LIN7A-201ENST00000261203 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
LIN7A-201ENST00000261203 PNPLA7Q6ZV29 1317 aa12.63□□□□□ -0.39
LIN7A-201ENST00000261203 KCNQ4P56696 695 aa12.63□□□□□ -0.39
LIN7A-201ENST00000261203 IFNL2Q8IZJ0 200 aa12.63□□□□□ -0.39
LIN7A-201ENST00000261203 PALLDQ8WX93 1383 aa12.63□□□□□ -0.39
LIN7A-201ENST00000261203 ARXQ96QS3 562 aa12.62□□□□□ -0.39
LIN7A-201ENST00000261203 FHDC1Q9C0D6 1143 aaPredicted RBP12.62□□□□□ -0.39
LIN7A-201ENST00000261203 MAP3K5Q99683 1374 aa12.61□□□□□ -0.39
LIN7A-201ENST00000261203 PHKG2P15735 406 aa12.61□□□□□ -0.39
LIN7A-201ENST00000261203 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
LIN7A-201ENST00000261203 PIGBQ92521 554 aa12.61□□□□□ -0.39
LIN7A-201ENST00000261203 C4BP0C0L5 1744 aa12.61□□□□□ -0.39
LIN7A-201ENST00000261203 HSP90AB1P08238 724 aaKnown RBP12.6□□□□□ -0.39
LIN7A-201ENST00000261203 POLD1P28340 1107 aa12.6□□□□□ -0.39
LIN7A-201ENST00000261203 C1QTNF8P60827 252 aa12.6□□□□□ -0.39
LIN7A-201ENST00000261203 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
LIN7A-201ENST00000261203 TMOD3Q9NYL9 352 aa12.6□□□□□ -0.39
LIN7A-201ENST00000261203 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
LIN7A-201ENST00000261203 AMOTQ4VCS5 1084 aa12.59□□□□□ -0.39
LIN7A-201ENST00000261203 PLEKHO1Q53GL0 409 aaPredicted RBP12.59□□□□□ -0.39
LIN7A-201ENST00000261203 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
LIN7A-201ENST00000261203 DCAF5Q96JK2 942 aa12.58□□□□□ -0.4
LIN7A-201ENST00000261203 ZNF831Q5JPB2 1677 aa12.57□□□□□ -0.4
LIN7A-201ENST00000261203 KDRP35968 1356 aa12.57□□□□□ -0.4
LIN7A-201ENST00000261203 CHD4Q14839 1912 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms