RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 PPM1GO15355 546 aaPredicted RBP11.66□□□□□ -0.54
TMEM258-201ENST00000257262 MORC1Q86VD1 984 aa11.66□□□□□ -0.54
TMEM258-201ENST00000257262 POLKQ9UBT6 870 aa11.66□□□□□ -0.54
TMEM258-201ENST00000257262 LRRC37A3O60309 1634 aa11.66□□□□□ -0.54
TMEM258-201ENST00000257262 NSD2O96028 1365 aa11.66□□□□□ -0.54
TMEM258-201ENST00000257262 FLT4P35916 1363 aa11.66□□□□□ -0.54
TMEM258-201ENST00000257262 KIF24Q5T7B8 1368 aa11.66□□□□□ -0.54
TMEM258-201ENST00000257262 ZEB1P37275 1124 aaPredicted RBP11.65□□□□□ -0.54
TMEM258-201ENST00000257262 DDB1Q16531 1140 aa11.65□□□□□ -0.54
TMEM258-201ENST00000257262 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.54
TMEM258-201ENST00000257262 CDCA7Q9BWT1 371 aaPredicted RBP11.65□□□□□ -0.54
TMEM258-201ENST00000257262 INSRP06213 1382 aa11.65□□□□□ -0.55
TMEM258-201ENST00000257262 DISP2A7MBM2 1401 aa11.64□□□□□ -0.55
TMEM258-201ENST00000257262 NBPF6Q5VWK0 638 aa11.64□□□□□ -0.55
TMEM258-201ENST00000257262 CCDC125Q86Z20 511 aa11.64□□□□□ -0.55
TMEM258-201ENST00000257262 NBPF4Q96M43 638 aa11.64□□□□□ -0.55
TMEM258-201ENST00000257262 EXOC5O00471 708 aa11.63□□□□□ -0.55
TMEM258-201ENST00000257262 IL2RBP14784 551 aa11.63□□□□□ -0.55
TMEM258-201ENST00000257262 CC2D1BQ5T0F9 858 aaKnown RBP11.63□□□□□ -0.55
TMEM258-201ENST00000257262 SRCAPQ6ZRS2 3230 aa11.63□□□□□ -0.55
TMEM258-201ENST00000257262 SMG6Q86US8 1419 aaKnown RBP11.62□□□□□ -0.55
TMEM258-201ENST00000257262 CNGB1Q14028 1251 aaPredicted RBP11.62□□□□□ -0.55
TMEM258-201ENST00000257262 FAM196AQ6ZSG2 479 aa11.62□□□□□ -0.55
TMEM258-201ENST00000257262 USHBP1Q8N6Y0 703 aa11.62□□□□□ -0.55
TMEM258-201ENST00000257262 RGPD1P0DJD0 1748 aa11.61□□□□□ -0.55
TMEM258-201ENST00000257262 MARCH10Q8NA82 808 aaPredicted RBP11.61□□□□□ -0.55
TMEM258-201ENST00000257262 EP400Q96L91 3159 aa11.61□□□□□ -0.55
TMEM258-201ENST00000257262 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
TMEM258-201ENST00000257262 SF3B2Q13435 895 aaKnown RBP11.6□□□□□ -0.55
TMEM258-201ENST00000257262 SBF2Q86WG5 1849 aa11.6□□□□□ -0.55
TMEM258-201ENST00000257262 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
TMEM258-201ENST00000257262 TRIM37O94972 964 aa11.59□□□□□ -0.55
TMEM258-201ENST00000257262 DEFB132Q7Z7B7 95 aa11.59□□□□□ -0.55
TMEM258-201ENST00000257262 OVOS2A0A0G2JMS6 1433 aa11.59□□□□□ -0.55
TMEM258-201ENST00000257262 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
TMEM258-201ENST00000257262 EIF4A2Q14240 407 aaKnown RBP11.58□□□□□ -0.56
TMEM258-201ENST00000257262 EYA1Q99502 592 aa11.58□□□□□ -0.56
TMEM258-201ENST00000257262 TNS2Q63HR2 1409 aa11.58□□□□□ -0.56
TMEM258-201ENST00000257262 MEGF6O75095 1541 aa11.57□□□□□ -0.56
TMEM258-201ENST00000257262 MTHFSP49914 203 aa11.57□□□□□ -0.56
TMEM258-201ENST00000257262 DDX54Q8TDD1 881 aaKnown RBP11.57□□□□□ -0.56
TMEM258-201ENST00000257262 RAPGEF4Q8WZA2 1011 aa11.57□□□□□ -0.56
TMEM258-201ENST00000257262 SHANK3Q9BYB0 1731 aa11.57□□□□□ -0.56
TMEM258-201ENST00000257262 APBA3O96018 575 aa11.56□□□□□ -0.56
TMEM258-201ENST00000257262 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
TMEM258-201ENST00000257262 TATP17735 454 aaPredicted RBP11.56□□□□□ -0.56
TMEM258-201ENST00000257262 BAG6P46379 1132 aa11.56□□□□□ -0.56
TMEM258-201ENST00000257262 EN1Q05925 392 aaPredicted RBP11.56□□□□□ -0.56
TMEM258-201ENST00000257262 ZCRB1Q8TBF4 217 aaKnown RBP11.56□□□□□ -0.56
TMEM258-201ENST00000257262 NCAPD2Q15021 1401 aa11.55□□□□□ -0.56
TMEM258-201ENST00000257262 DDX10Q13206 875 aaKnown RBP11.55□□□□□ -0.56
TMEM258-201ENST00000257262 PTF1AQ7RTS3 328 aa11.55□□□□□ -0.56
TMEM258-201ENST00000257262 BCL9O00512 1426 aa11.54□□□□□ -0.56
TMEM258-201ENST00000257262 ACSBG1Q96GR2 724 aa11.54□□□□□ -0.56
TMEM258-201ENST00000257262 KCNQ2O43526 872 aa11.53□□□□□ -0.56
TMEM258-201ENST00000257262 IL13P35225 146 aa11.53□□□□□ -0.56
TMEM258-201ENST00000257262 EZH2Q15910 746 aaKnown RBP11.53□□□□□ -0.56
TMEM258-201ENST00000257262 BCL11BQ9C0K0 894 aaPredicted RBP11.53□□□□□ -0.56
TMEM258-201ENST00000257262 IGSF1Q8N6C5 1336 aa11.53□□□□□ -0.56
TMEM258-201ENST00000257262 NHSQ6T4R5 1651 aa11.52□□□□□ -0.56
TMEM258-201ENST00000257262 PKD1L3Q7Z443 1732 aa11.52□□□□□ -0.56
TMEM258-201ENST00000257262 CAMKK2Q96RR4 588 aa11.52□□□□□ -0.57
TMEM258-201ENST00000257262 DOT1LQ8TEK3 1739 aa11.52□□□□□ -0.57
TMEM258-201ENST00000257262 PPP2R1AP30153 589 aa11.51□□□□□ -0.57
TMEM258-201ENST00000257262 PLSCR1O15162 318 aa11.5□□□□□ -0.57
TMEM258-201ENST00000257262 CYP27B1O15528 508 aa11.5□□□□□ -0.57
TMEM258-201ENST00000257262 DIAPH1O60610 1272 aaKnown RBP11.5□□□□□ -0.57
TMEM258-201ENST00000257262 SULT6B1Q6IMI4 303 aa11.5□□□□□ -0.57
TMEM258-201ENST00000257262 AEBP1Q8IUX7 1158 aa11.5□□□□□ -0.57
TMEM258-201ENST00000257262 SPG7Q9UQ90 795 aa11.5□□□□□ -0.57
TMEM258-201ENST00000257262 PCDH11XQ9BZA7 1347 aa11.5□□□□□ -0.57
TMEM258-201ENST00000257262 PCDH11YQ9BZA8 1340 aa11.5□□□□□ -0.57
TMEM258-201ENST00000257262 RREB1Q92766 1687 aa11.49□□□□□ -0.57
TMEM258-201ENST00000257262 BTAF1O14981 1849 aa11.49□□□□□ -0.57
TMEM258-201ENST00000257262 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMEM258-201ENST00000257262 RGPD3A6NKT7 1758 aaPredicted RBP11.49□□□□□ -0.57
TMEM258-201ENST00000257262 RGPD4Q7Z3J3 1758 aa11.49□□□□□ -0.57
TMEM258-201ENST00000257262 HMOX1P09601 288 aa11.48□□□□□ -0.57
TMEM258-201ENST00000257262 PRIM1P49642 420 aaKnown RBP11.48□□□□□ -0.57
TMEM258-201ENST00000257262 SYTL4Q96C24 671 aaPredicted RBP11.48□□□□□ -0.57
TMEM258-201ENST00000257262 COL3A1P02461 1466 aaPredicted RBP11.48□□□□□ -0.57
TMEM258-201ENST00000257262 KAT6BQ8WYB5 2073 aa11.47□□□□□ -0.57
TMEM258-201ENST00000257262 NUP188Q5SRE5 1749 aa11.47□□□□□ -0.57
TMEM258-201ENST00000257262 KDRP35968 1356 aa11.47□□□□□ -0.57
TMEM258-201ENST00000257262 PARD3Q8TEW0 1356 aa11.47□□□□□ -0.57
TMEM258-201ENST00000257262 ZNF316A6NFI3 1004 aaPredicted RBP11.47□□□□□ -0.57
TMEM258-201ENST00000257262 NKX1-1Q15270 411 aaPredicted RBP11.47□□□□□ -0.57
TMEM258-201ENST00000257262 PLEKHO1Q53GL0 409 aaPredicted RBP11.47□□□□□ -0.57
TMEM258-201ENST00000257262 IFNL2Q8IZJ0 200 aa11.47□□□□□ -0.57
TMEM258-201ENST00000257262 PROM2Q8N271 834 aa11.47□□□□□ -0.57
TMEM258-201ENST00000257262 CFAP53Q96M91 514 aa11.47□□□□□ -0.57
TMEM258-201ENST00000257262 ITGB4P16144 1822 aa11.46□□□□□ -0.57
TMEM258-201ENST00000257262 TOGARAM1Q9Y4F4 1720 aa11.46□□□□□ -0.57
TMEM258-201ENST00000257262 U2SURPO15042 1029 aaKnown RBP11.46□□□□□ -0.57
TMEM258-201ENST00000257262 PHKG2P15735 406 aa11.46□□□□□ -0.57
TMEM258-201ENST00000257262 PLEKHG2Q9H7P9 1386 aa11.45□□□□□ -0.58
TMEM258-201ENST00000257262 HAX1O00165 279 aa11.45□□□□□ -0.58
TMEM258-201ENST00000257262 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
TMEM258-201ENST00000257262 AMOTQ4VCS5 1084 aa11.45□□□□□ -0.58
TMEM258-201ENST00000257262 RALBP1Q15311 655 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 1552.5 ms