RNA–Protein interactions for RNA: ENST00000256720.6

LPIN1-201, Transcript of lipin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPIN1, Length 5,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-201ENST00000256720 TRDNQ13061 729 aa12.13□□□□□ -0.47
LPIN1-201ENST00000256720 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
LPIN1-201ENST00000256720 ZRANB1Q9UGI0 708 aa12.13□□□□□ -0.47
LPIN1-201ENST00000256720 IGHMBP2P38935 993 aaKnown RBP12.13□□□□□ -0.47
LPIN1-201ENST00000256720 EIF4A2Q14240 407 aaKnown RBP12.13□□□□□ -0.47
LPIN1-201ENST00000256720 RNF20Q5VTR2 975 aa12.13□□□□□ -0.47
LPIN1-201ENST00000256720 NOC3LQ8WTT2 800 aaKnown RBP12.13□□□□□ -0.47
LPIN1-201ENST00000256720 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
LPIN1-201ENST00000256720 PIK3R4Q99570 1358 aa12.13□□□□□ -0.47
LPIN1-201ENST00000256720 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.13□□□□□ -0.47
LPIN1-201ENST00000256720 DBF4Q9UBU7 674 aaPredicted RBP12.13□□□□□ -0.47
LPIN1-201ENST00000256720 POLKQ9UBT6 870 aa12.12□□□□□ -0.47
LPIN1-201ENST00000256720 HOXC9P31274 260 aa12.12□□□□□ -0.47
LPIN1-201ENST00000256720 WASHC4Q2M389 1173 aa12.12□□□□□ -0.47
LPIN1-201ENST00000256720 PLEKHG3A1L390 1219 aa12.12□□□□□ -0.47
LPIN1-201ENST00000256720 AKAP17AQ02040 695 aaKnown RBP12.12□□□□□ -0.47
LPIN1-201ENST00000256720 CCDC184Q52MB2 194 aa12.12□□□□□ -0.47
LPIN1-201ENST00000256720 TTC39AQ5SRH9 613 aa12.12□□□□□ -0.47
LPIN1-201ENST00000256720 ALDH1L2Q3SY69 923 aa12.12□□□□□ -0.47
LPIN1-201ENST00000256720 SNRPA1P09661 255 aaKnown RBP12.11□□□□□ -0.47
LPIN1-201ENST00000256720 FBLN1P23142 703 aa12.11□□□□□ -0.47
LPIN1-201ENST00000256720 KIF1BO60333 1816 aa12.11□□□□□ -0.47
LPIN1-201ENST00000256720 PTPRTO14522 1441 aa12.11□□□□□ -0.47
LPIN1-201ENST00000256720 MYOM2P54296 1465 aa12.11□□□□□ -0.47
LPIN1-201ENST00000256720 NOP58Q9Y2X3 529 aaKnown RBP12.11□□□□□ -0.47
LPIN1-201ENST00000256720 CNTROBQ8N137 903 aa12.11□□□□□ -0.47
LPIN1-201ENST00000256720 GCC1Q96CN9 775 aa12.11□□□□□ -0.47
LPIN1-201ENST00000256720 LNPKQ9C0E8 428 aa12.11□□□□□ -0.47
LPIN1-201ENST00000256720 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
LPIN1-201ENST00000256720 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
LPIN1-201ENST00000256720 CPLX2Q6PUV4 134 aaKnown RBP12.1□□□□□ -0.47
LPIN1-201ENST00000256720 SPRYD3Q8NCJ5 442 aa12.1□□□□□ -0.47
LPIN1-201ENST00000256720 A2ML1A8K2U0 1454 aa12.1□□□□□ -0.47
LPIN1-201ENST00000256720 BCAR3O75815 825 aa12.1□□□□□ -0.47
LPIN1-201ENST00000256720 INTS3Q68E01 1043 aaKnown RBP12.1□□□□□ -0.47
LPIN1-201ENST00000256720 ACSBG1Q96GR2 724 aa12.1□□□□□ -0.47
LPIN1-201ENST00000256720 PRDM15P57071 1507 aaPredicted RBP12.1□□□□□ -0.47
LPIN1-201ENST00000256720 GLI2P10070 1586 aa12.1□□□□□ -0.47
LPIN1-201ENST00000256720 FAM161AQ3B820 660 aa12.1□□□□□ -0.47
LPIN1-201ENST00000256720 RFC4P35249 363 aa12.1□□□□□ -0.47
LPIN1-201ENST00000256720 SBNO1A3KN83 1393 aa12.09□□□□□ -0.47
LPIN1-201ENST00000256720 METP08581 1390 aa12.09□□□□□ -0.47
LPIN1-201ENST00000256720 IL16Q14005 1332 aa12.09□□□□□ -0.47
LPIN1-201ENST00000256720 ERICH2A1L162 156 aa12.09□□□□□ -0.47
LPIN1-201ENST00000256720 RAD21O60216 631 aa12.09□□□□□ -0.47
LPIN1-201ENST00000256720 MYD88Q99836 296 aa12.09□□□□□ -0.47
LPIN1-201ENST00000256720 MAP3K19Q56UN5 1328 aa12.09□□□□□ -0.47
LPIN1-201ENST00000256720 FSD1Q9BTV5 496 aa12.09□□□□□ -0.47
LPIN1-201ENST00000256720 HIP1O00291 1037 aa12.09□□□□□ -0.47
LPIN1-201ENST00000256720 POLR3AO14802 1390 aaPredicted RBP12.08□□□□□ -0.47
LPIN1-201ENST00000256720 MVPQ14764 893 aaKnown RBP12.08□□□□□ -0.48
LPIN1-201ENST00000256720 CEP126Q9P2H0 1117 aa12.08□□□□□ -0.48
LPIN1-201ENST00000256720 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.08□□□□□ -0.485e-9■■■□□ 17.6
LPIN1-201ENST00000256720 FANCIQ9NVI1 1328 aa12.08□□□□□ -0.48
LPIN1-201ENST00000256720 ATP6V1AP38606 617 aa12.08□□□□□ -0.48
LPIN1-201ENST00000256720 NOL8Q76FK4 1167 aaKnown RBP12.08□□□□□ -0.48
LPIN1-201ENST00000256720 ANO2Q9NQ90 1003 aa12.08□□□□□ -0.48
LPIN1-201ENST00000256720 USP21Q9UK80 565 aa12.08□□□□□ -0.48
LPIN1-201ENST00000256720 CDC42BPBQ9Y5S2 1711 aa12.08□□□□□ -0.48
LPIN1-201ENST00000256720 DNAJC2Q99543 621 aaKnown RBP12.08□□□□□ -0.48
LPIN1-201ENST00000256720 C1orf115Q9H7X2 142 aa12.08□□□□□ -0.48
LPIN1-201ENST00000256720 PLEKHH1Q9ULM0 1364 aa12.08□□□□□ -0.48
LPIN1-201ENST00000256720 IQGAP3Q86VI3 1631 aa12.08□□□□□ -0.48
LPIN1-201ENST00000256720 NBPF14Q5TI25 921 aa12.07□□□□□ -0.48
LPIN1-201ENST00000256720 DCAF5Q96JK2 942 aa12.07□□□□□ -0.48
LPIN1-201ENST00000256720 TRMT112Q9UI30 125 aaKnown RBP12.07□□□□□ -0.48
LPIN1-201ENST00000256720 SIL1Q9H173 461 aa12.07□□□□□ -0.48
LPIN1-201ENST00000256720 SRGAP3O43295 1099 aa12.07□□□□□ -0.48
LPIN1-201ENST00000256720 MARCH6O60337 910 aa12.07□□□□□ -0.48
LPIN1-201ENST00000256720 RPGRQ92834 1020 aaKnown RBP12.07□□□□□ -0.48
LPIN1-201ENST00000256720 CARD14Q9BXL6 1004 aa12.07□□□□□ -0.48
LPIN1-201ENST00000256720 LRRCC1Q9C099 1032 aa12.07□□□□□ -0.48
LPIN1-201ENST00000256720 DNAAF4Q8WXU2 420 aa12.06□□□□□ -0.48
LPIN1-201ENST00000256720 PHF14O94880 888 aa12.06□□□□□ -0.48
LPIN1-201ENST00000256720 PPP1R42Q7Z4L9 355 aa12.06□□□□□ -0.48
LPIN1-201ENST00000256720 EYA1Q99502 592 aa12.06□□□□□ -0.48
LPIN1-201ENST00000256720 DDX17Q92841 729 aaKnown RBP12.06□□□□□ -0.48
LPIN1-201ENST00000256720 GBP4Q96PP9 640 aa12.06□□□□□ -0.48
LPIN1-201ENST00000256720 SPATA31E1Q6ZUB1 1445 aa12.06□□□□□ -0.48
LPIN1-201ENST00000256720 SLC3A2P08195 630 aaKnown RBP12.06□□□□□ -0.48
LPIN1-201ENST00000256720 VPS53Q5VIR6 699 aa12.06□□□□□ -0.48
LPIN1-201ENST00000256720 CWC22Q9HCG8 908 aaKnown RBP12.06□□□□□ -0.48
LPIN1-201ENST00000256720 PTPRCP08575 1304 aa12.06□□□□□ -0.48
LPIN1-201ENST00000256720 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
LPIN1-201ENST00000256720 RPAP2Q8IXW5 612 aaPredicted RBP12.06□□□□□ -0.48
LPIN1-201ENST00000256720 ZNF335Q9H4Z2 1342 aaPredicted RBP12.05□□□□□ -0.48
LPIN1-201ENST00000256720 RALYLQ86SE5 291 aaKnown RBP12.05□□□□□ -0.48
LPIN1-201ENST00000256720 FAM184AQ8NB25 1140 aa12.05□□□□□ -0.48
LPIN1-201ENST00000256720 NKTRP30414 1462 aaKnown RBP12.05□□□□□ -0.48
LPIN1-201ENST00000256720 ZSCAN25Q6NSZ9 544 aa12.05□□□□□ -0.48
LPIN1-201ENST00000256720 AEBP1Q8IUX7 1158 aa12.05□□□□□ -0.48
LPIN1-201ENST00000256720 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
LPIN1-201ENST00000256720 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
LPIN1-201ENST00000256720 FAM83GA6ND36 823 aa12.05□□□□□ -0.48
LPIN1-201ENST00000256720 DHX16O60231 1041 aaKnown RBP12.05□□□□□ -0.48
LPIN1-201ENST00000256720 GOLGA6L1Q8N7Z2 621 aa12.05□□□□□ -0.48
LPIN1-201ENST00000256720 CDC45O75419 566 aa12.04□□□□□ -0.48
LPIN1-201ENST00000256720 ST5P78524 1137 aa12.04□□□□□ -0.48
LPIN1-201ENST00000256720 NCBP3Q53F19 620 aaKnown RBP12.04□□□□□ -0.48
LPIN1-201ENST00000256720 NFXL1Q6ZNB6 911 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms