RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 THUMPD2Q9BTF0 503 aaKnown RBP12.29□□□□□ -0.44
NIP7-202ENST00000254941 HTATSF1O43719 755 aaKnown RBP12.29□□□□□ -0.44
NIP7-202ENST00000254941 ZNF853P0CG23 659 aa12.29□□□□□ -0.44
NIP7-202ENST00000254941 CERKQ8TCT0 537 aa12.29□□□□□ -0.44
NIP7-202ENST00000254941 IFT57Q9NWB7 429 aa12.29□□□□□ -0.44
NIP7-202ENST00000254941 COL5A2P05997 1499 aaPredicted RBP12.28□□□□□ -0.44
NIP7-202ENST00000254941 COL14A1Q05707 1796 aaKnown RBP12.28□□□□□ -0.44
NIP7-202ENST00000254941 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
NIP7-202ENST00000254941 RRP1P56182 461 aaKnown RBP12.28□□□□□ -0.44
NIP7-202ENST00000254941 GNAI1P63096 354 aa12.28□□□□□ -0.44
NIP7-202ENST00000254941 DCTN1Q14203 1278 aa12.28□□□□□ -0.44
NIP7-202ENST00000254941 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
NIP7-202ENST00000254941 CFAP44Q96MT7 982 aa12.28□□□□□ -0.44
NIP7-202ENST00000254941 NLRP2Q9NX02 1062 aa12.28□□□□□ -0.44
NIP7-202ENST00000254941 PLEKHG2Q9H7P9 1386 aa12.28□□□□□ -0.44
NIP7-202ENST00000254941 GNAT3A8MTJ3 354 aa12.27□□□□□ -0.44
NIP7-202ENST00000254941 CT47B1P0C2W7 299 aaPredicted RBP12.27□□□□□ -0.44
NIP7-202ENST00000254941 AMOTQ4VCS5 1084 aa12.27□□□□□ -0.44
NIP7-202ENST00000254941 MAP3K5Q99683 1374 aa12.27□□□□□ -0.45
NIP7-202ENST00000254941 WDR17Q8IZU2 1322 aa12.27□□□□□ -0.45
NIP7-202ENST00000254941 CSB-PGBD3P0DP91 1061 aa12.27□□□□□ -0.45
NIP7-202ENST00000254941 ERICH6BQ5W0A0 696 aa12.27□□□□□ -0.45
NIP7-202ENST00000254941 MCM10Q7L590 875 aa12.27□□□□□ -0.45
NIP7-202ENST00000254941 RTF1Q92541 710 aaKnown RBP12.27□□□□□ -0.45
NIP7-202ENST00000254941 IRX6P78412 446 aaPredicted RBP12.26□□□□□ -0.45
NIP7-202ENST00000254941 PLEKHO1Q53GL0 409 aaPredicted RBP12.26□□□□□ -0.45
NIP7-202ENST00000254941 CRB1P82279 1406 aa12.26□□□□□ -0.45
NIP7-202ENST00000254941 PKD1L3Q7Z443 1732 aa12.26□□□□□ -0.45
NIP7-202ENST00000254941 EXOSC9Q06265 439 aaKnown RBP12.25□□□□□ -0.45
NIP7-202ENST00000254941 PARP4Q9UKK3 1724 aaKnown RBP12.25□□□□□ -0.45
NIP7-202ENST00000254941 RAPGEF4Q8WZA2 1011 aa12.25□□□□□ -0.45
NIP7-202ENST00000254941 MBIPQ9NS73 344 aa12.25□□□□□ -0.45
NIP7-202ENST00000254941 LAS1LQ9Y4W2 734 aaKnown RBP12.25□□□□□ -0.45
NIP7-202ENST00000254941 MEGF6O75095 1541 aa12.24□□□□□ -0.45
NIP7-202ENST00000254941 CHL1O00533 1208 aa12.24□□□□□ -0.45
NIP7-202ENST00000254941 RARSP54136 660 aaKnown RBP12.24□□□□□ -0.45
NIP7-202ENST00000254941 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.45
NIP7-202ENST00000254941 PLCH1Q4KWH8 1693 aa12.24□□□□□ -0.45
NIP7-202ENST00000254941 ADAMTS7Q9UKP4 1686 aa12.24□□□□□ -0.45
NIP7-202ENST00000254941 AKAP4Q5JQC9 854 aa12.23□□□□□ -0.45
NIP7-202ENST00000254941 ZNF530Q6P9A1 599 aaPredicted RBP12.23□□□□□ -0.45
NIP7-202ENST00000254941 IL17REQ8NFR9 667 aa12.23□□□□□ -0.45
NIP7-202ENST00000254941 CEMIPQ8WUJ3 1361 aa12.23□□□□□ -0.45
NIP7-202ENST00000254941 BCAR3O75815 825 aa12.23□□□□□ -0.45
NIP7-202ENST00000254941 TATP17735 454 aaPredicted RBP12.23□□□□□ -0.45
NIP7-202ENST00000254941 TOM1L2Q6ZVM7 507 aa12.23□□□□□ -0.45
NIP7-202ENST00000254941 CARD10Q9BWT7 1032 aa12.23□□□□□ -0.45
NIP7-202ENST00000254941 SCN11AQ9UI33 1791 aa12.23□□□□□ -0.45
NIP7-202ENST00000254941 EVA1CP58658 441 aa12.22□□□□□ -0.45
NIP7-202ENST00000254941 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.22□□□□□ -0.45
NIP7-202ENST00000254941 BTG4Q9NY30 223 aa12.22□□□□□ -0.45
NIP7-202ENST00000254941 OVOS2A0A0G2JMS6 1433 aa12.22□□□□□ -0.45
NIP7-202ENST00000254941 SIPA1L3O60292 1781 aaPredicted RBP12.22□□□□□ -0.45
NIP7-202ENST00000254941 PLIN1O60240 522 aa12.21□□□□□ -0.45
NIP7-202ENST00000254941 C1orf141Q5JVX7 400 aa12.21□□□□□ -0.45
NIP7-202ENST00000254941 LARP1Q6PKG0 1096 aaKnown RBP12.21□□□□□ -0.45
NIP7-202ENST00000254941 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
NIP7-202ENST00000254941 NWD2Q9ULI1 1742 aa12.21□□□□□ -0.46
NIP7-202ENST00000254941 STRN4Q9NRL3 753 aa12.21□□□□□ -0.46
NIP7-202ENST00000254941 BABAM1Q9NWV8 329 aa12.21□□□□□ -0.46
NIP7-202ENST00000254941 SPG7Q9UQ90 795 aa12.21□□□□□ -0.46
NIP7-202ENST00000254941 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
NIP7-202ENST00000254941 JCADQ9P266 1359 aa12.2□□□□□ -0.46
NIP7-202ENST00000254941 KDM3BQ7LBC6 1761 aa12.2□□□□□ -0.46
NIP7-202ENST00000254941 SHANK3Q9BYB0 1731 aa12.19□□□□□ -0.46
NIP7-202ENST00000254941 TAF7Q15545 349 aaPredicted RBP12.19□□□□□ -0.46
NIP7-202ENST00000254941 LGR6Q9HBX8 967 aa12.19□□□□□ -0.46
NIP7-202ENST00000254941 CACNA1FO60840 1977 aa12.19□□□□□ -0.46
NIP7-202ENST00000254941 VAMP4O75379 141 aa12.19□□□□□ -0.46
NIP7-202ENST00000254941 ADAMTS2O95450 1211 aa12.19□□□□□ -0.46
NIP7-202ENST00000254941 ALDH1L2Q3SY69 923 aa12.19□□□□□ -0.46
NIP7-202ENST00000254941 TSPYL6Q8N831 410 aa12.19□□□□□ -0.46
NIP7-202ENST00000254941 C8orf58Q8NAV2 365 aa12.19□□□□□ -0.46
NIP7-202ENST00000254941 TSPYL4Q9UJ04 414 aa12.19□□□□□ -0.46
NIP7-202ENST00000254941 WNK3Q9BYP7 1800 aa12.18□□□□□ -0.46
NIP7-202ENST00000254941 RNMTO43148 476 aaKnown RBP12.18□□□□□ -0.46
NIP7-202ENST00000254941 IL2RBP14784 551 aa12.18□□□□□ -0.46
NIP7-202ENST00000254941 TWISTNBQ3B726 338 aaPredicted RBP12.18□□□□□ -0.46
NIP7-202ENST00000254941 MPRIPQ6WCQ1 1025 aa12.18□□□□□ -0.46
NIP7-202ENST00000254941 SSH1Q8WYL5 1049 aa12.18□□□□□ -0.46
NIP7-202ENST00000254941 MIS18AQ9NYP9 233 aa12.18□□□□□ -0.46
NIP7-202ENST00000254941 NUTM2BA6NNL0 878 aaPredicted RBP12.17□□□□□ -0.46
NIP7-202ENST00000254941 NUTM2EB1AL46 878 aaPredicted RBP12.17□□□□□ -0.46
NIP7-202ENST00000254941 CAPN15O75808 1086 aa12.17□□□□□ -0.46
NIP7-202ENST00000254941 PHKG2P15735 406 aa12.17□□□□□ -0.46
NIP7-202ENST00000254941 BRPF1P55201 1214 aaPredicted RBP12.17□□□□□ -0.46
NIP7-202ENST00000254941 NUTM2AQ8IVF1 878 aaPredicted RBP12.17□□□□□ -0.46
NIP7-202ENST00000254941 IFNL2Q8IZJ0 200 aa12.17□□□□□ -0.46
NIP7-202ENST00000254941 BCL2L13Q9BXK5 485 aa12.17□□□□□ -0.46
NIP7-202ENST00000254941 CYP27B1O15528 508 aa12.17□□□□□ -0.46
NIP7-202ENST00000254941 DSG3P32926 999 aa12.17□□□□□ -0.46
NIP7-202ENST00000254941 PDE3AQ14432 1141 aa12.17□□□□□ -0.46
NIP7-202ENST00000254941 C20orf194Q5TEA3 1177 aa12.17□□□□□ -0.46
NIP7-202ENST00000254941 SMC4Q9NTJ3 1288 aa12.17□□□□□ -0.46
NIP7-202ENST00000254941 PPP4R2Q9NY27 417 aa12.17□□□□□ -0.46
NIP7-202ENST00000254941 SLIT2O94813 1529 aa12.16□□□□□ -0.46
NIP7-202ENST00000254941 ELL2O00472 640 aaPredicted RBP12.16□□□□□ -0.46
NIP7-202ENST00000254941 TEFQ10587 303 aa12.16□□□□□ -0.46
NIP7-202ENST00000254941 ZCRB1Q8TBF4 217 aaKnown RBP12.16□□□□□ -0.46
NIP7-202ENST00000254941 KDM6AO15550 1401 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms