RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 EVA1CP58658 441 aa16.98■□□□□ 0.31
LSM8-201ENST00000249299 CALD1Q05682 793 aaKnown RBP16.98■□□□□ 0.31
LSM8-201ENST00000249299 WWC1Q8IX03 1113 aa16.98■□□□□ 0.31
LSM8-201ENST00000249299 PHACTR3Q96KR7 559 aa16.98■□□□□ 0.31
LSM8-201ENST00000249299 NLRP2Q9NX02 1062 aa16.98■□□□□ 0.31
LSM8-201ENST00000249299 BTG4Q9NY30 223 aa16.97■□□□□ 0.31
LSM8-201ENST00000249299 IL16Q14005 1332 aa16.97■□□□□ 0.31
LSM8-201ENST00000249299 RIPK4P57078 832 aa16.96■□□□□ 0.31
LSM8-201ENST00000249299 GOLGA2Q08379 1002 aa16.96■□□□□ 0.31
LSM8-201ENST00000249299 PLEKHO1Q53GL0 409 aaPredicted RBP16.96■□□□□ 0.31
LSM8-201ENST00000249299 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
LSM8-201ENST00000249299 CRB1P82279 1406 aa16.96■□□□□ 0.31
LSM8-201ENST00000249299 SLIT2O94813 1529 aa16.96■□□□□ 0.31
LSM8-201ENST00000249299 TOM1L2Q6ZVM7 507 aa16.96■□□□□ 0.3
LSM8-201ENST00000249299 FNBP4Q8N3X1 1017 aaPredicted RBP16.96■□□□□ 0.3
LSM8-201ENST00000249299 FBXO41Q8TF61 875 aa16.96■□□□□ 0.3
LSM8-201ENST00000249299 ADAMTS2O95450 1211 aa16.95■□□□□ 0.3
LSM8-201ENST00000249299 THRAP3Q9Y2W1 955 aaKnown RBP16.95■□□□□ 0.3
LSM8-201ENST00000249299 NUTM2BA6NNL0 878 aaPredicted RBP16.94■□□□□ 0.3
LSM8-201ENST00000249299 NUTM2EB1AL46 878 aaPredicted RBP16.94■□□□□ 0.3
LSM8-201ENST00000249299 E9PSI1 815 aa16.94■□□□□ 0.3
LSM8-201ENST00000249299 TATP17735 454 aaPredicted RBP16.94■□□□□ 0.3
LSM8-201ENST00000249299 NUTM2AQ8IVF1 878 aaPredicted RBP16.94■□□□□ 0.3
LSM8-201ENST00000249299 CDCA7Q9BWT1 371 aaPredicted RBP16.94■□□□□ 0.3
LSM8-201ENST00000249299 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
LSM8-201ENST00000249299 MTHFSDQ2M296 383 aaKnown RBP16.93■□□□□ 0.3
LSM8-201ENST00000249299 USHBP1Q8N6Y0 703 aa16.93■□□□□ 0.3
LSM8-201ENST00000249299 SPG7Q9UQ90 795 aa16.93■□□□□ 0.3
LSM8-201ENST00000249299 NWD2Q9ULI1 1742 aa16.92■□□□□ 0.3
LSM8-201ENST00000249299 LARP1Q6PKG0 1096 aaKnown RBP16.92■□□□□ 0.3
LSM8-201ENST00000249299 TRMT2AQ8IZ69 625 aaKnown RBP16.92■□□□□ 0.3
LSM8-201ENST00000249299 RRP7AQ9Y3A4 280 aaKnown RBP16.92■□□□□ 0.3
LSM8-201ENST00000249299 SLFN5Q08AF3 891 aa16.91■□□□□ 0.3
LSM8-201ENST00000249299 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
LSM8-201ENST00000249299 UNC5CLQ8IV45 518 aa16.91■□□□□ 0.3
LSM8-201ENST00000249299 RTF1Q92541 710 aaKnown RBP16.91■□□□□ 0.3
LSM8-201ENST00000249299 STRN4Q9NRL3 753 aa16.91■□□□□ 0.3
LSM8-201ENST00000249299 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
LSM8-201ENST00000249299 RGPD5Q99666 1765 aa16.9■□□□□ 0.3
LSM8-201ENST00000249299 GNAT3A8MTJ3 354 aa16.9■□□□□ 0.3
LSM8-201ENST00000249299 IL2RBP14784 551 aa16.9■□□□□ 0.3
LSM8-201ENST00000249299 AKAP4Q5JQC9 854 aa16.9■□□□□ 0.3
LSM8-201ENST00000249299 NGLY1Q96IV0 654 aa16.9■□□□□ 0.3
LSM8-201ENST00000249299 MYH16Q9H6N6 1097 aa16.9■□□□□ 0.3
LSM8-201ENST00000249299 OVOS2A0A0G2JMS6 1433 aa16.89■□□□□ 0.29
LSM8-201ENST00000249299 MAP3K5Q99683 1374 aa16.89■□□□□ 0.29
LSM8-201ENST00000249299 BABAM1Q9NWV8 329 aa16.89■□□□□ 0.29
LSM8-201ENST00000249299 LRP6O75581 1613 aa16.88■□□□□ 0.29
LSM8-201ENST00000249299 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
LSM8-201ENST00000249299 VPS72Q15906 364 aa16.88■□□□□ 0.29
LSM8-201ENST00000249299 BARGINQ6ZT62 677 aa16.88■□□□□ 0.29
LSM8-201ENST00000249299 SPATA31A1Q5TZJ5 1347 aa16.87■□□□□ 0.29
LSM8-201ENST00000249299 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
LSM8-201ENST00000249299 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
LSM8-201ENST00000249299 BCL9LQ86UU0 1499 aa16.87■□□□□ 0.29
LSM8-201ENST00000249299 C1orf141Q5JVX7 400 aa16.87■□□□□ 0.29
LSM8-201ENST00000249299 C8orf37Q96NL8 207 aa16.87■□□□□ 0.29
LSM8-201ENST00000249299 IFT57Q9NWB7 429 aa16.87■□□□□ 0.29
LSM8-201ENST00000249299 PLCH1Q4KWH8 1693 aa16.86■□□□□ 0.29
LSM8-201ENST00000249299 GNAI1P63096 354 aa16.86■□□□□ 0.29
LSM8-201ENST00000249299 MEX3CQ5U5Q3 659 aaKnown RBP16.86■□□□□ 0.29
LSM8-201ENST00000249299 DUSP27Q5VZP5 1158 aa16.86■□□□□ 0.29
LSM8-201ENST00000249299 ZNF530Q6P9A1 599 aaPredicted RBP16.86■□□□□ 0.29
LSM8-201ENST00000249299 DISP2A7MBM2 1401 aa16.86■□□□□ 0.29
LSM8-201ENST00000249299 MEGF6O75095 1541 aa16.85■□□□□ 0.29
LSM8-201ENST00000249299 CT47B1P0C2W7 299 aaPredicted RBP16.85■□□□□ 0.29
LSM8-201ENST00000249299 ZNF853P0CG23 659 aa16.85■□□□□ 0.29
LSM8-201ENST00000249299 NRAPQ86VF7 1730 aa16.85■□□□□ 0.29
LSM8-201ENST00000249299 IFNL2Q8IZJ0 200 aa16.85■□□□□ 0.29
LSM8-201ENST00000249299 ZCRB1Q8TBF4 217 aaKnown RBP16.85■□□□□ 0.29
LSM8-201ENST00000249299 CFAP44Q96MT7 982 aa16.85■□□□□ 0.29
LSM8-201ENST00000249299 CEMIPQ8WUJ3 1361 aa16.85■□□□□ 0.29
LSM8-201ENST00000249299 PCDH11XQ9BZA7 1347 aa16.84■□□□□ 0.29
LSM8-201ENST00000249299 PCDH11YQ9BZA8 1340 aa16.84■□□□□ 0.29
LSM8-201ENST00000249299 CDCA7LQ96GN5 454 aa16.84■□□□□ 0.29
LSM8-201ENST00000249299 USP21Q9UK80 565 aa16.84■□□□□ 0.29
LSM8-201ENST00000249299 RGPD2P0DJD1 1756 aa16.84■□□□□ 0.29
LSM8-201ENST00000249299 NKX1-1Q15270 411 aaPredicted RBP16.83■□□□□ 0.28
LSM8-201ENST00000249299 PARP4Q9UKK3 1724 aaKnown RBP16.82■□□□□ 0.28
LSM8-201ENST00000249299 PHKG2P15735 406 aa16.82■□□□□ 0.28
LSM8-201ENST00000249299 IL17REQ8NFR9 667 aa16.82■□□□□ 0.28
LSM8-201ENST00000249299 DCAF5Q96JK2 942 aa16.82■□□□□ 0.28
LSM8-201ENST00000249299 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.81■□□□□ 0.28
LSM8-201ENST00000249299 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
LSM8-201ENST00000249299 CHL1O00533 1208 aa16.81■□□□□ 0.28
LSM8-201ENST00000249299 PKD1L3Q7Z443 1732 aa16.81■□□□□ 0.28
LSM8-201ENST00000249299 EXOC5O00471 708 aa16.8■□□□□ 0.28
LSM8-201ENST00000249299 ZNF428Q96B54 188 aa16.8■□□□□ 0.28
LSM8-201ENST00000249299 TRPC5Q9UL62 973 aaPredicted RBP16.8■□□□□ 0.28
LSM8-201ENST00000249299 CYP27B1O15528 508 aa16.79■□□□□ 0.28
LSM8-201ENST00000249299 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
LSM8-201ENST00000249299 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
LSM8-201ENST00000249299 MCM10Q7L590 875 aa16.79■□□□□ 0.28
LSM8-201ENST00000249299 AFF2P51816 1311 aa16.79■□□□□ 0.28
LSM8-201ENST00000249299 USP35Q9P2H5 1018 aa16.78■□□□□ 0.28
LSM8-201ENST00000249299 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
LSM8-201ENST00000249299 FANCIQ9NVI1 1328 aa16.78■□□□□ 0.28
LSM8-201ENST00000249299 ADAMTS7Q9UKP4 1686 aa16.77■□□□□ 0.28
LSM8-201ENST00000249299 ONECUT3O60422 494 aaPredicted RBP16.77■□□□□ 0.28
LSM8-201ENST00000249299 TEFQ10587 303 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms