RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.58■□□□□ 0.89
SGPP1-201ENST00000247225 NUTM1Q86Y26 1132 aa20.58■□□□□ 0.89
SGPP1-201ENST00000247225 ABCC4O15439 1325 aa20.58■□□□□ 0.88
SGPP1-201ENST00000247225 UQCRHLA0A096LP55 91 aa20.58■□□□□ 0.88
SGPP1-201ENST00000247225 UQCRHP07919 91 aa20.58■□□□□ 0.88
SGPP1-201ENST00000247225 C17orf53Q8N3J3 647 aaPredicted RBP20.58■□□□□ 0.88
SGPP1-201ENST00000247225 ZDHHC9Q9Y397 364 aa20.58■□□□□ 0.88
SGPP1-201ENST00000247225 QRICH2Q9H0J4 1663 aa20.58■□□□□ 0.88
SGPP1-201ENST00000247225 PRDM10Q9NQV6 1147 aa20.57■□□□□ 0.88
SGPP1-201ENST00000247225 SLC52A1Q9NWF4 448 aa20.57■□□□□ 0.88
SGPP1-201ENST00000247225 MSH6P52701 1360 aa20.56■□□□□ 0.88
SGPP1-201ENST00000247225 HMMRO75330 724 aa20.56■□□□□ 0.88
SGPP1-201ENST00000247225 EFCAB6Q5THR3 1501 aa20.55■□□□□ 0.88
SGPP1-201ENST00000247225 EIF2S2P20042 333 aaKnown RBP20.55■□□□□ 0.88
SGPP1-201ENST00000247225 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.55■□□□□ 0.88
SGPP1-201ENST00000247225 GADD45BO75293 160 aaPredicted RBP20.55■□□□□ 0.88
SGPP1-201ENST00000247225 PPRC1Q5VV67 1664 aaKnown RBP20.54■□□□□ 0.88
SGPP1-201ENST00000247225 PDE1AP54750 535 aa20.54■□□□□ 0.88
SGPP1-201ENST00000247225 ESF1Q9H501 851 aaKnown RBP20.54■□□□□ 0.88
SGPP1-201ENST00000247225 YTHDC2Q9H6S0 1430 aaKnown RBP20.54■□□□□ 0.88
SGPP1-201ENST00000247225 TPM2P07951 284 aa20.54■□□□□ 0.88
SGPP1-201ENST00000247225 RPAP2Q8IXW5 612 aaPredicted RBP20.54■□□□□ 0.88
SGPP1-201ENST00000247225 EIF4A2Q14240 407 aaKnown RBP20.53■□□□□ 0.88
SGPP1-201ENST00000247225 VIRMAQ69YN4 1812 aaKnown RBP20.53■□□□□ 0.88
SGPP1-201ENST00000247225 NCOA3Q9Y6Q9 1424 aa20.53■□□□□ 0.88
SGPP1-201ENST00000247225 CPA1P15085 419 aa20.53■□□□□ 0.88
SGPP1-201ENST00000247225 STK31Q9BXU1 1019 aa20.53■□□□□ 0.88
SGPP1-201ENST00000247225 SHROOM2Q13796 1616 aa20.52■□□□□ 0.88
SGPP1-201ENST00000247225 OFD1O75665 1012 aa20.52■□□□□ 0.88
SGPP1-201ENST00000247225 MCCP23508 829 aa20.52■□□□□ 0.88
SGPP1-201ENST00000247225 PPP1R9BQ96SB3 815 aa20.52■□□□□ 0.88
SGPP1-201ENST00000247225 ADGRB1O14514 1584 aa20.52■□□□□ 0.88
SGPP1-201ENST00000247225 FIBPO43427 364 aa20.52■□□□□ 0.87
SGPP1-201ENST00000247225 ZNF853P0CG23 659 aa20.51■□□□□ 0.87
SGPP1-201ENST00000247225 UNC5CLQ8IV45 518 aa20.51■□□□□ 0.87
SGPP1-201ENST00000247225 USP25Q9UHP3 1055 aa20.51■□□□□ 0.87
SGPP1-201ENST00000247225 PNMA6EA0A0J9YXQ4 647 aa20.5■□□□□ 0.87
SGPP1-201ENST00000247225 WASLO00401 505 aaPredicted RBP20.5■□□□□ 0.87
SGPP1-201ENST00000247225 OS9Q13438 667 aaPredicted RBP20.5■□□□□ 0.87
SGPP1-201ENST00000247225 CWC22Q9HCG8 908 aaKnown RBP20.5■□□□□ 0.87
SGPP1-201ENST00000247225 PUS7Q96PZ0 661 aaKnown RBP20.49■□□□□ 0.87
SGPP1-201ENST00000247225 AMPHP49418 695 aa20.48■□□□□ 0.87
SGPP1-201ENST00000247225 ZNF445P59923 1031 aa20.48■□□□□ 0.87
SGPP1-201ENST00000247225 CYB5RLQ6IPT4 315 aa20.48■□□□□ 0.87
SGPP1-201ENST00000247225 TTC12Q9H892 705 aaPredicted RBP20.48■□□□□ 0.87
SGPP1-201ENST00000247225 LRRFIP2Q9Y608 721 aaKnown RBP20.48■□□□□ 0.87
SGPP1-201ENST00000247225 CCDC61Q9Y6R9 512 aa20.48■□□□□ 0.87
SGPP1-201ENST00000247225 GNAI2P04899 355 aa20.48■□□□□ 0.87
SGPP1-201ENST00000247225 GLI2P10070 1586 aa20.48■□□□□ 0.87
SGPP1-201ENST00000247225 SURF6O75683 361 aaKnown RBP20.48■□□□□ 0.87
SGPP1-201ENST00000247225 LRSAM1Q6UWE0 723 aa20.48■□□□□ 0.87
SGPP1-201ENST00000247225 LRRCC1Q9C099 1032 aa20.48■□□□□ 0.87
SGPP1-201ENST00000247225 TSPY26PQ9H489 355 aa20.48■□□□□ 0.87
SGPP1-201ENST00000247225 ANXA1P04083 346 aa20.47■□□□□ 0.87
SGPP1-201ENST00000247225 SPC24Q8NBT2 197 aa20.47■□□□□ 0.87
SGPP1-201ENST00000247225 ADGRB3O60242 1522 aa20.47■□□□□ 0.87
SGPP1-201ENST00000247225 LRRC7Q96NW7 1537 aa20.47■□□□□ 0.87
SGPP1-201ENST00000247225 MX1P20591 662 aa20.47■□□□□ 0.87
SGPP1-201ENST00000247225 SPG7Q9UQ90 795 aa20.47■□□□□ 0.87
SGPP1-201ENST00000247225 POGZQ7Z3K3 1410 aa20.46■□□□□ 0.87
SGPP1-201ENST00000247225 NRXN1Q9ULB1 1477 aa20.46■□□□□ 0.87
SGPP1-201ENST00000247225 RIMS2Q9UQ26 1411 aa20.46■□□□□ 0.87
SGPP1-201ENST00000247225 NCBP3Q53F19 620 aaKnown RBP20.46■□□□□ 0.87
SGPP1-201ENST00000247225 USP48Q86UV5 1035 aa20.46■□□□□ 0.87
SGPP1-201ENST00000247225 TAOK2Q9UL54 1235 aa20.46■□□□□ 0.87
SGPP1-201ENST00000247225 RTL1A6NKG5 1358 aa20.45■□□□□ 0.86
SGPP1-201ENST00000247225 ESYT1Q9BSJ8 1104 aa20.45■□□□□ 0.86
SGPP1-201ENST00000247225 PDCL3Q9H2J4 239 aa20.45■□□□□ 0.86
SGPP1-201ENST00000247225 FAM135BQ49AJ0 1406 aa20.45■□□□□ 0.86
SGPP1-201ENST00000247225 HCLS1P14317 486 aaPredicted RBP20.45■□□□□ 0.86
SGPP1-201ENST00000247225 CWC27Q6UX04 472 aaKnown RBP20.45■□□□□ 0.86
SGPP1-201ENST00000247225 USHBP1Q8N6Y0 703 aa20.45■□□□□ 0.86
SGPP1-201ENST00000247225 SLC26A8Q96RN1 970 aa20.45■□□□□ 0.86
SGPP1-201ENST00000247225 CNPY2Q9Y2B0 182 aa20.45■□□□□ 0.86
SGPP1-201ENST00000247225 MTHFSDQ2M296 383 aaKnown RBP20.44■□□□□ 0.86
SGPP1-201ENST00000247225 NOL7Q9UMY1 257 aaKnown RBP20.44■□□□□ 0.86
SGPP1-201ENST00000247225 ZKSCAN5Q9Y2L8 839 aa20.44■□□□□ 0.86
SGPP1-201ENST00000247225 MROH1Q8NDA8 1641 aa20.44■□□□□ 0.86
SGPP1-201ENST00000247225 VPS37CA5D8V6 355 aaPredicted RBP20.43■□□□□ 0.86
SGPP1-201ENST00000247225 KCNJ4P48050 445 aa20.43■□□□□ 0.86
SGPP1-201ENST00000247225 IL25Q9H293 177 aa20.43■□□□□ 0.86
SGPP1-201ENST00000247225 PNPLA6Q8IY17 1366 aa20.42■□□□□ 0.86
SGPP1-201ENST00000247225 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.42■□□□□ 0.86
SGPP1-201ENST00000247225 CCDC39Q9UFE4 941 aa20.42■□□□□ 0.86
SGPP1-201ENST00000247225 COL3A1P02461 1466 aaPredicted RBP20.42■□□□□ 0.86
SGPP1-201ENST00000247225 CHL1O00533 1208 aa20.42■□□□□ 0.86
SGPP1-201ENST00000247225 NGDNQ8NEJ9 315 aaKnown RBP20.42■□□□□ 0.86
SGPP1-201ENST00000247225 CYP2E1P05181 493 aaPredicted RBP20.42■□□□□ 0.86
SGPP1-201ENST00000247225 BRPF1P55201 1214 aaPredicted RBP20.42■□□□□ 0.86
SGPP1-201ENST00000247225 FERMT3Q86UX7 667 aa20.42■□□□□ 0.86
SGPP1-201ENST00000247225 CCDC9Q9Y3X0 531 aaKnown RBP20.42■□□□□ 0.86
SGPP1-201ENST00000247225 KIAA1210Q9ULL0 1709 aa20.41■□□□□ 0.86
SGPP1-201ENST00000247225 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.41■□□□□ 0.86
SGPP1-201ENST00000247225 KIAA2012Q0VF49 1180 aa20.41■□□□□ 0.86
SGPP1-201ENST00000247225 GIMAP6Q6P9H5 292 aa20.41■□□□□ 0.86
SGPP1-201ENST00000247225 YEATS2Q9ULM3 1422 aa20.4■□□□□ 0.86
SGPP1-201ENST00000247225 VWDEQ8N2E2 1590 aa20.4■□□□□ 0.86
SGPP1-201ENST00000247225 CHMLP26374 656 aa20.4■□□□□ 0.86
SGPP1-201ENST00000247225 FLIIQ13045 1269 aa20.4■□□□□ 0.86
SGPP1-201ENST00000247225 TCEANC2Q96MN5 208 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms