RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 PLEKHO1Q53GL0 409 aaPredicted RBP24.19■■□□□ 1.46
TNFSF9-201ENST00000245817 AMOTQ4VCS5 1084 aa24.18■■□□□ 1.46
TNFSF9-201ENST00000245817 SPATA31A6Q5VVP1 1343 aa24.18■■□□□ 1.46
TNFSF9-201ENST00000245817 ZNF853P0CG23 659 aa24.18■■□□□ 1.46
TNFSF9-201ENST00000245817 DLG5Q8TDM6 1919 aa24.17■■□□□ 1.46
TNFSF9-201ENST00000245817 COL22A1Q8NFW1 1626 aaPredicted RBP24.17■■□□□ 1.46
TNFSF9-201ENST00000245817 CRYBG1Q9Y4K1 1723 aa24.17■■□□□ 1.46
TNFSF9-201ENST00000245817 BCAR3O75815 825 aa24.17■■□□□ 1.46
TNFSF9-201ENST00000245817 RARSP54136 660 aaKnown RBP24.17■■□□□ 1.46
TNFSF9-201ENST00000245817 NUTM2BA6NNL0 878 aaPredicted RBP24.16■■□□□ 1.46
TNFSF9-201ENST00000245817 NUTM2EB1AL46 878 aaPredicted RBP24.16■■□□□ 1.46
TNFSF9-201ENST00000245817 CANXP27824 592 aaKnown RBP24.16■■□□□ 1.46
TNFSF9-201ENST00000245817 NUTM2AQ8IVF1 878 aaPredicted RBP24.16■■□□□ 1.46
TNFSF9-201ENST00000245817 MBIPQ9NS73 344 aa24.15■■□□□ 1.46
TNFSF9-201ENST00000245817 MAP3K5Q99683 1374 aa24.15■■□□□ 1.46
TNFSF9-201ENST00000245817 RAPGEF4Q8WZA2 1011 aa24.15■■□□□ 1.46
TNFSF9-201ENST00000245817 NCAPD2Q15021 1401 aa24.14■■□□□ 1.46
TNFSF9-201ENST00000245817 COL18A1P39060 1754 aa24.12■■□□□ 1.45
TNFSF9-201ENST00000245817 C1orf141Q5JVX7 400 aa24.11■■□□□ 1.45
TNFSF9-201ENST00000245817 ZNF428Q96B54 188 aa24.11■■□□□ 1.45
TNFSF9-201ENST00000245817 RGPD5Q99666 1765 aa24.11■■□□□ 1.45
TNFSF9-201ENST00000245817 CHL1O00533 1208 aa24.11■■□□□ 1.45
TNFSF9-201ENST00000245817 TATP17735 454 aaPredicted RBP24.11■■□□□ 1.45
TNFSF9-201ENST00000245817 ZNF530Q6P9A1 599 aaPredicted RBP24.11■■□□□ 1.45
TNFSF9-201ENST00000245817 RGPD2P0DJD1 1756 aa24.1■■□□□ 1.45
TNFSF9-201ENST00000245817 EVA1CP58658 441 aa24.1■■□□□ 1.45
TNFSF9-201ENST00000245817 AKAP4Q5JQC9 854 aa24.1■■□□□ 1.45
TNFSF9-201ENST00000245817 FRAT1Q92837 279 aaPredicted RBP24.1■■□□□ 1.45
TNFSF9-201ENST00000245817 ADAMTS2O95450 1211 aa24.09■■□□□ 1.45
TNFSF9-201ENST00000245817 SMC4Q9NTJ3 1288 aa24.09■■□□□ 1.45
TNFSF9-201ENST00000245817 TOM1L2Q6ZVM7 507 aa24.08■■□□□ 1.45
TNFSF9-201ENST00000245817 PELP1Q8IZL8 1130 aaKnown RBP24.08■■□□□ 1.45
TNFSF9-201ENST00000245817 EXOC6Q8TAG9 804 aa24.08■■□□□ 1.45
TNFSF9-201ENST00000245817 BCL2L13Q9BXK5 485 aa24.08■■□□□ 1.45
TNFSF9-201ENST00000245817 CRB1P82279 1406 aa24.08■■□□□ 1.45
TNFSF9-201ENST00000245817 CAMTA1Q9Y6Y1 1673 aa24.08■■□□□ 1.45
TNFSF9-201ENST00000245817 TSPYL4Q9UJ04 414 aa24.08■■□□□ 1.44
TNFSF9-201ENST00000245817 WDR17Q8IZU2 1322 aa24.08■■□□□ 1.44
TNFSF9-201ENST00000245817 ABCA3Q99758 1704 aa24.07■■□□□ 1.44
TNFSF9-201ENST00000245817 TWISTNBQ3B726 338 aaPredicted RBP24.06■■□□□ 1.44
TNFSF9-201ENST00000245817 ALDH1L2Q3SY69 923 aa24.06■■□□□ 1.44
TNFSF9-201ENST00000245817 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
TNFSF9-201ENST00000245817 CRBNQ96SW2 442 aa24.06■■□□□ 1.44
TNFSF9-201ENST00000245817 SPG7Q9UQ90 795 aa24.06■■□□□ 1.44
TNFSF9-201ENST00000245817 FAM208AQ9UK61 1670 aaKnown RBP24.06■■□□□ 1.44
TNFSF9-201ENST00000245817 MEX3CQ5U5Q3 659 aaKnown RBP24.05■■□□□ 1.44
TNFSF9-201ENST00000245817 PDE3AQ14432 1141 aa24.05■■□□□ 1.44
TNFSF9-201ENST00000245817 C20orf194Q5TEA3 1177 aa24.05■■□□□ 1.44
TNFSF9-201ENST00000245817 LMO7Q8WWI1 1683 aa24.04■■□□□ 1.44
TNFSF9-201ENST00000245817 ELL2O00472 640 aaPredicted RBP24.04■■□□□ 1.44
TNFSF9-201ENST00000245817 VAMP4O75379 141 aa24.04■■□□□ 1.44
TNFSF9-201ENST00000245817 TAF7Q15545 349 aaPredicted RBP24.04■■□□□ 1.44
TNFSF9-201ENST00000245817 SSH1Q8WYL5 1049 aa24.04■■□□□ 1.44
TNFSF9-201ENST00000245817 CCDC136Q96JN2 1154 aa24.04■■□□□ 1.44
TNFSF9-201ENST00000245817 STRN4Q9NRL3 753 aa24.04■■□□□ 1.44
TNFSF9-201ENST00000245817 BABAM1Q9NWV8 329 aa24.04■■□□□ 1.44
TNFSF9-201ENST00000245817 MS4A1P11836 297 aa24.03■■□□□ 1.44
TNFSF9-201ENST00000245817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.03■■□□□ 1.44
TNFSF9-201ENST00000245817 PLEKHG2Q9H7P9 1386 aa24.03■■□□□ 1.44
TNFSF9-201ENST00000245817 TSPYL6Q8N831 410 aa24.02■■□□□ 1.44
TNFSF9-201ENST00000245817 C8orf58Q8NAV2 365 aa24.02■■□□□ 1.44
TNFSF9-201ENST00000245817 COL5A2P05997 1499 aaPredicted RBP24.02■■□□□ 1.44
TNFSF9-201ENST00000245817 ZKSCAN2Q63HK3 967 aa24.02■■□□□ 1.44
TNFSF9-201ENST00000245817 B4GALNT3Q6L9W6 998 aa24.02■■□□□ 1.44
TNFSF9-201ENST00000245817 MIS18AQ9NYP9 233 aa24.02■■□□□ 1.44
TNFSF9-201ENST00000245817 LRP6O75581 1613 aa24.02■■□□□ 1.43
TNFSF9-201ENST00000245817 KIF16BQ96L93 1317 aa24.01■■□□□ 1.43
TNFSF9-201ENST00000245817 IPO8O15397 1037 aaKnown RBP24.01■■□□□ 1.43
TNFSF9-201ENST00000245817 TEFQ10587 303 aa24.01■■□□□ 1.43
TNFSF9-201ENST00000245817 C8orf37Q96NL8 207 aa24.01■■□□□ 1.43
TNFSF9-201ENST00000245817 MPRIPQ6WCQ1 1025 aa24■■□□□ 1.43
TNFSF9-201ENST00000245817 NGLY1Q96IV0 654 aa24■■□□□ 1.43
TNFSF9-201ENST00000245817 CARD10Q9BWT7 1032 aa24■■□□□ 1.43
TNFSF9-201ENST00000245817 BTG4Q9NY30 223 aa23.99■■□□□ 1.43
TNFSF9-201ENST00000245817 CEMIPQ8WUJ3 1361 aa23.99■■□□□ 1.43
TNFSF9-201ENST00000245817 RNMTO43148 476 aaKnown RBP23.99■■□□□ 1.43
TNFSF9-201ENST00000245817 LGR6Q9HBX8 967 aa23.99■■□□□ 1.43
TNFSF9-201ENST00000245817 LARP1Q6PKG0 1096 aaKnown RBP23.97■■□□□ 1.43
TNFSF9-201ENST00000245817 FTSJ3Q8IY81 847 aaKnown RBP23.97■■□□□ 1.43
TNFSF9-201ENST00000245817 IFNL2Q8IZJ0 200 aa23.97■■□□□ 1.43
TNFSF9-201ENST00000245817 BRPF1P55201 1214 aaPredicted RBP23.96■■□□□ 1.43
TNFSF9-201ENST00000245817 NOB1Q9ULX3 412 aaKnown RBP23.96■■□□□ 1.43
TNFSF9-201ENST00000245817 MEGF6O75095 1541 aa23.96■■□□□ 1.43
TNFSF9-201ENST00000245817 LRRC37A3O60309 1634 aa23.95■■□□□ 1.42
TNFSF9-201ENST00000245817 PANK1Q8TE04 598 aa23.95■■□□□ 1.42
TNFSF9-201ENST00000245817 OVOS2A0A0G2JMS6 1433 aa23.94■■□□□ 1.42
TNFSF9-201ENST00000245817 HSP90AB1P08238 724 aaKnown RBP23.94■■□□□ 1.42
TNFSF9-201ENST00000245817 IL2RBP14784 551 aa23.94■■□□□ 1.42
TNFSF9-201ENST00000245817 PHKG2P15735 406 aa23.94■■□□□ 1.42
TNFSF9-201ENST00000245817 ATF7IPQ6VMQ6 1270 aa23.94■■□□□ 1.42
TNFSF9-201ENST00000245817 DZIP1LQ8IYY4 767 aaKnown RBP23.94■■□□□ 1.42
TNFSF9-201ENST00000245817 COL14A1Q05707 1796 aaKnown RBP23.94■■□□□ 1.42
TNFSF9-201ENST00000245817 KRT24Q2M2I5 525 aa23.93■■□□□ 1.42
TNFSF9-201ENST00000245817 MRPL50Q8N5N7 158 aaKnown RBP23.93■■□□□ 1.42
TNFSF9-201ENST00000245817 CLUAP1Q96AJ1 413 aa23.93■■□□□ 1.42
TNFSF9-201ENST00000245817 BTBD11A6QL63 1104 aa23.92■■□□□ 1.42
TNFSF9-201ENST00000245817 FNBP4Q8N3X1 1017 aaPredicted RBP23.92■■□□□ 1.42
TNFSF9-201ENST00000245817 COG6Q9Y2V7 657 aa23.92■■□□□ 1.42
TNFSF9-201ENST00000245817 ZCRB1Q8TBF4 217 aaKnown RBP23.92■■□□□ 1.42
TNFSF9-201ENST00000245817 SOS1Q07889 1333 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms