RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 PIK3C2AO00443 1686 aa24.79■■□□□ 1.56
HOXC13-201ENST00000243056 HMOX1P09601 288 aa24.79■■□□□ 1.56
HOXC13-201ENST00000243056 TAF7LQ5H9L4 462 aa24.79■■□□□ 1.56
HOXC13-201ENST00000243056 DMRT2Q9Y5R5 561 aa24.79■■□□□ 1.56
HOXC13-201ENST00000243056 IPO4Q8TEX9 1081 aaKnown RBP24.78■■□□□ 1.56
HOXC13-201ENST00000243056 MAP3K19Q56UN5 1328 aa24.78■■□□□ 1.56
HOXC13-201ENST00000243056 TMEM51Q9NW97 253 aa24.77■■□□□ 1.56
HOXC13-201ENST00000243056 COL3A1P02461 1466 aaPredicted RBP24.77■■□□□ 1.56
HOXC13-201ENST00000243056 SLAIN2Q9P270 581 aa24.77■■□□□ 1.56
HOXC13-201ENST00000243056 MAPK8IP3Q9UPT6 1336 aa24.76■■□□□ 1.55
HOXC13-201ENST00000243056 BRINP3Q76B58 766 aa24.75■■□□□ 1.55
HOXC13-201ENST00000243056 CCDC94Q9BW85 323 aaPredicted RBP24.75■■□□□ 1.55
HOXC13-201ENST00000243056 DUSP27Q5VZP5 1158 aa24.75■■□□□ 1.55
HOXC13-201ENST00000243056 PNPLA6Q8IY17 1366 aa24.75■■□□□ 1.55
HOXC13-201ENST00000243056 DYNC1I1O14576 645 aa24.74■■□□□ 1.55
HOXC13-201ENST00000243056 NCLP19338 710 aaKnown RBP24.74■■□□□ 1.55
HOXC13-201ENST00000243056 CABLES1Q8TDN4 633 aa24.74■■□□□ 1.55
HOXC13-201ENST00000243056 UPF2Q9HAU5 1272 aaKnown RBP24.74■■□□□ 1.55
HOXC13-201ENST00000243056 AATKQ6ZMQ8 1374 aa24.73■■□□□ 1.55
HOXC13-201ENST00000243056 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.73■■□□□ 1.55
HOXC13-201ENST00000243056 IL13P35225 146 aa24.72■■□□□ 1.55
HOXC13-201ENST00000243056 TCP11L2Q8N4U5 519 aa24.72■■□□□ 1.55
HOXC13-201ENST00000243056 INSRP06213 1382 aa24.72■■□□□ 1.55
HOXC13-201ENST00000243056 USP31Q70CQ4 1352 aa24.72■■□□□ 1.55
HOXC13-201ENST00000243056 LTV1Q96GA3 475 aaPredicted RBP24.71■■□□□ 1.55
HOXC13-201ENST00000243056 NASPP49321 788 aaPredicted RBP24.71■■□□□ 1.55
HOXC13-201ENST00000243056 NCOA3Q9Y6Q9 1424 aa24.7■■□□□ 1.54
HOXC13-201ENST00000243056 AMPHP49418 695 aa24.7■■□□□ 1.54
HOXC13-201ENST00000243056 EIF4A2Q14240 407 aaKnown RBP24.7■■□□□ 1.54
HOXC13-201ENST00000243056 ANP32BQ92688 251 aaKnown RBP24.7■■□□□ 1.54
HOXC13-201ENST00000243056 AEBP1Q8IUX7 1158 aa24.7■■□□□ 1.54
HOXC13-201ENST00000243056 DCCP43146 1447 aa24.69■■□□□ 1.54
HOXC13-201ENST00000243056 SPINK5Q9NQ38 1064 aaPredicted RBP24.69■■□□□ 1.54
HOXC13-201ENST00000243056 RUNDC1Q96C34 613 aa24.68■■□□□ 1.54
HOXC13-201ENST00000243056 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.68■■□□□ 1.54
HOXC13-201ENST00000243056 PEAK1Q9H792 1746 aa24.68■■□□□ 1.54
HOXC13-201ENST00000243056 ZNF500O60304 480 aaPredicted RBP24.67■■□□□ 1.54
HOXC13-201ENST00000243056 PRKAR2BP31323 418 aa24.66■■□□□ 1.54
HOXC13-201ENST00000243056 PHACTR3Q96KR7 559 aa24.66■■□□□ 1.54
HOXC13-201ENST00000243056 PLEKHF1Q96S99 279 aa24.66■■□□□ 1.54
HOXC13-201ENST00000243056 MARF1Q9Y4F3 1742 aaKnown RBP24.66■■□□□ 1.54
HOXC13-201ENST00000243056 ZC3H6P61129 1189 aaKnown RBP24.66■■□□□ 1.54
HOXC13-201ENST00000243056 VGLL3A8MV65 326 aa24.65■■□□□ 1.54
HOXC13-201ENST00000243056 KIF20AO95235 890 aa24.65■■□□□ 1.54
HOXC13-201ENST00000243056 ZNF830Q96NB3 372 aaPredicted RBP24.65■■□□□ 1.54
HOXC13-201ENST00000243056 GCP02774 474 aa24.65■■□□□ 1.54
HOXC13-201ENST00000243056 GTPBP4Q9BZE4 634 aaKnown RBP24.64■■□□□ 1.53
HOXC13-201ENST00000243056 CDK12Q9NYV4 1490 aaPredicted RBP24.64■■□□□ 1.53
HOXC13-201ENST00000243056 TNPO1Q92973 898 aaKnown RBP24.63■■□□□ 1.53
HOXC13-201ENST00000243056 NPHP3Q7Z494 1330 aa24.63■■□□□ 1.53
HOXC13-201ENST00000243056 DDIT3P35638 169 aa24.63■■□□□ 1.53
HOXC13-201ENST00000243056 NOL7Q9UMY1 257 aaKnown RBP24.63■■□□□ 1.53
HOXC13-201ENST00000243056 HOXC9P31274 260 aa24.62■■□□□ 1.53
HOXC13-201ENST00000243056 SULT6B1Q6IMI4 303 aa24.62■■□□□ 1.53
HOXC13-201ENST00000243056 PAXIP1Q6ZW49 1069 aaPredicted RBP24.62■■□□□ 1.53
HOXC13-201ENST00000243056 USHBP1Q8N6Y0 703 aa24.6■■□□□ 1.53
HOXC13-201ENST00000243056 WWC1Q8IX03 1113 aa24.6■■□□□ 1.53
HOXC13-201ENST00000243056 ZNF521Q96K83 1311 aa24.59■■□□□ 1.53
HOXC13-201ENST00000243056 SASS6Q6UVJ0 657 aa24.59■■□□□ 1.53
HOXC13-201ENST00000243056 LETM1O95202 739 aaPredicted RBP24.59■■□□□ 1.53
HOXC13-201ENST00000243056 TRPM3Q9HCF6 1732 aaPredicted RBP24.58■■□□□ 1.53
HOXC13-201ENST00000243056 SBNO1A3KN83 1393 aa24.58■■□□□ 1.53
HOXC13-201ENST00000243056 HS1BP3Q53T59 392 aa24.58■■□□□ 1.53
HOXC13-201ENST00000243056 AXIN2Q9Y2T1 843 aa24.58■■□□□ 1.53
HOXC13-201ENST00000243056 FLT4P35916 1363 aa24.58■■□□□ 1.52
HOXC13-201ENST00000243056 BCAR3O75815 825 aa24.57■■□□□ 1.52
HOXC13-201ENST00000243056 CBX1P83916 185 aa24.57■■□□□ 1.52
HOXC13-201ENST00000243056 PLCD3Q8N3E9 789 aa24.57■■□□□ 1.52
HOXC13-201ENST00000243056 TMPOP42166 694 aaKnown RBP24.57■■□□□ 1.52
HOXC13-201ENST00000243056 SKOR2Q2VWA4 1001 aaPredicted RBP24.57■■□□□ 1.52
HOXC13-201ENST00000243056 EYA1Q99502 592 aa24.57■■□□□ 1.52
HOXC13-201ENST00000243056 FCHSD2O94868 740 aa24.56■■□□□ 1.52
HOXC13-201ENST00000243056 KIF1AQ12756 1690 aa24.56■■□□□ 1.52
HOXC13-201ENST00000243056 CHRNA2Q15822 529 aa24.56■■□□□ 1.52
HOXC13-201ENST00000243056 LTBP4Q8N2S1 1624 aa24.56■■□□□ 1.52
HOXC13-201ENST00000243056 PXDNQ92626 1479 aa24.56■■□□□ 1.52
HOXC13-201ENST00000243056 LRRC59Q96AG4 307 aaKnown RBP24.55■■□□□ 1.52
HOXC13-201ENST00000243056 SPATA31A3Q5VYP0 1347 aa24.55■■□□□ 1.52
HOXC13-201ENST00000243056 GOLGA2Q08379 1002 aa24.55■■□□□ 1.52
HOXC13-201ENST00000243056 JARID2Q92833 1246 aaPredicted RBP24.55■■□□□ 1.52
HOXC13-201ENST00000243056 THUMPD2Q9BTF0 503 aaKnown RBP24.55■■□□□ 1.52
HOXC13-201ENST00000243056 PIP4K2BP78356 416 aa24.54■■□□□ 1.52
HOXC13-201ENST00000243056 C22orf23Q9BZE7 217 aa24.54■■□□□ 1.52
HOXC13-201ENST00000243056 CLUAP1Q96AJ1 413 aa24.54■■□□□ 1.52
HOXC13-201ENST00000243056 NFAT5O94916 1531 aa24.53■■□□□ 1.52
HOXC13-201ENST00000243056 IQSEC2Q5JU85 1478 aa24.53■■□□□ 1.52
HOXC13-201ENST00000243056 ARHGEF25Q86VW2 580 aa24.53■■□□□ 1.52
HOXC13-201ENST00000243056 HSCBQ8IWL3 235 aa24.53■■□□□ 1.52
HOXC13-201ENST00000243056 KCNH5Q8NCM2 988 aa24.53■■□□□ 1.52
HOXC13-201ENST00000243056 GBP4Q96PP9 640 aa24.53■■□□□ 1.52
HOXC13-201ENST00000243056 CSPP1Q1MSJ5 1256 aa24.52■■□□□ 1.52
HOXC13-201ENST00000243056 TRIM35Q9UPQ4 493 aa24.52■■□□□ 1.52
HOXC13-201ENST00000243056 MED1Q15648 1581 aaPredicted RBP24.52■■□□□ 1.52
HOXC13-201ENST00000243056 ZBTB22O15209 634 aa24.52■■□□□ 1.52
HOXC13-201ENST00000243056 ZNF710Q8N1W2 664 aa24.51■■□□□ 1.51
HOXC13-201ENST00000243056 ZKSCAN5Q9Y2L8 839 aa24.51■■□□□ 1.51
HOXC13-201ENST00000243056 FAM83GA6ND36 823 aa24.51■■□□□ 1.51
HOXC13-201ENST00000243056 SLFN5Q08AF3 891 aa24.51■■□□□ 1.51
HOXC13-201ENST00000243056 ATP2B3Q16720 1220 aa24.51■■□□□ 1.51
HOXC13-201ENST00000243056 IP6K1Q92551 441 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms