RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 CEP135Q66GS9 1140 aa12.01□□□□□ -0.49
SLF2-201ENST00000238961 IPO4Q8TEX9 1081 aaKnown RBP12.01□□□□□ -0.49
SLF2-201ENST00000238961 FIBPO43427 364 aa12.01□□□□□ -0.49
SLF2-201ENST00000238961 SPECC1Q5M775 1068 aa12.01□□□□□ -0.49
SLF2-201ENST00000238961 KANK4Q5T7N3 995 aaPredicted RBP12.01□□□□□ -0.49
SLF2-201ENST00000238961 CAVIN1Q6NZI2 390 aaKnown RBP12□□□□□ -0.49
SLF2-201ENST00000238961 IKBKGQ9Y6K9 419 aa12□□□□□ -0.49
SLF2-201ENST00000238961 CLGNO14967 610 aa12□□□□□ -0.49
SLF2-201ENST00000238961 FBF1Q8TES7 1133 aa12□□□□□ -0.49
SLF2-201ENST00000238961 PDCP20941 246 aa12□□□□□ -0.49
SLF2-201ENST00000238961 DHX8Q14562 1220 aaKnown RBP12□□□□□ -0.49
SLF2-201ENST00000238961 CCDC96Q2M329 555 aa12□□□□□ -0.49
SLF2-201ENST00000238961 TRMT1LQ7Z2T5 733 aaKnown RBP12□□□□□ -0.49
SLF2-201ENST00000238961 VPS36Q86VN1 386 aa12□□□□□ -0.49
SLF2-201ENST00000238961 ANAPC4Q9UJX5 808 aa12□□□□□ -0.49
SLF2-201ENST00000238961 MAP7D1Q3KQU3 841 aa12□□□□□ -0.49
SLF2-201ENST00000238961 CACNA2D4Q7Z3S7 1137 aa12□□□□□ -0.49
SLF2-201ENST00000238961 MPHOSPH8Q99549 860 aa12□□□□□ -0.49
SLF2-201ENST00000238961 NOL3O60936 208 aaKnown RBP11.99□□□□□ -0.49
SLF2-201ENST00000238961 ARHGAP29Q52LW3 1261 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 CRACR2BQ8N4Y2 399 aaPredicted RBP11.99□□□□□ -0.49
SLF2-201ENST00000238961 GPATCH11Q8N954 259 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 NUTM2GQ5VZR2 741 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 CCDC89Q8N998 374 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.99□□□□□ -0.49
SLF2-201ENST00000238961 IMMTQ16891 758 aaKnown RBP11.99□□□□□ -0.49
SLF2-201ENST00000238961 EFCAB2Q5VUJ9 269 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 TAOK3Q9H2K8 898 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 ZNF428Q96B54 188 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 TSG101Q99816 390 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 TNMDQ9H2S6 317 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 RIPK4P57078 832 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 LNPKQ9C0E8 428 aa11.99□□□□□ -0.49
SLF2-201ENST00000238961 ACTN2P35609 894 aa11.98□□□□□ -0.49
SLF2-201ENST00000238961 TDO2P48775 406 aa11.98□□□□□ -0.49
SLF2-201ENST00000238961 PDE4AP27815 886 aa11.98□□□□□ -0.49
SLF2-201ENST00000238961 UBAC1Q9BSL1 405 aa11.98□□□□□ -0.49
SLF2-201ENST00000238961 SEC63Q9UGP8 760 aaKnown RBP11.98□□□□□ -0.49
SLF2-201ENST00000238961 MINK1Q8N4C8 1332 aaPredicted RBP11.98□□□□□ -0.49
SLF2-201ENST00000238961 HIP1O00291 1037 aa11.98□□□□□ -0.49
SLF2-201ENST00000238961 FAM69CQ0P6D2 419 aa11.98□□□□□ -0.49
SLF2-201ENST00000238961 DYNC1I1O14576 645 aa11.97□□□□□ -0.49
SLF2-201ENST00000238961 SMC1BQ8NDV3 1235 aa11.97□□□□□ -0.49
SLF2-201ENST00000238961 HNRNPMP52272 730 aaKnown RBP eCLIP11.97□□□□□ -0.49
SLF2-201ENST00000238961 SNX16P57768 344 aa11.97□□□□□ -0.49
SLF2-201ENST00000238961 MPNDQ8N594 471 aa11.97□□□□□ -0.49
SLF2-201ENST00000238961 MKRN1Q9UHC7 482 aaKnown RBP11.97□□□□□ -0.49
SLF2-201ENST00000238961 TAF12Q16514 161 aa11.96□□□□□ -0.49
SLF2-201ENST00000238961 DDX11Q96FC9 970 aa11.96□□□□□ -0.49
SLF2-201ENST00000238961 DIAPH1O60610 1272 aaKnown RBP11.96□□□□□ -0.49
SLF2-201ENST00000238961 FLIIQ13045 1269 aa11.96□□□□□ -0.49
SLF2-201ENST00000238961 AEBP1Q8IUX7 1158 aa11.96□□□□□ -0.49
SLF2-201ENST00000238961 RAI14Q9P0K7 980 aa11.96□□□□□ -0.49
SLF2-201ENST00000238961 TMCO4Q5TGY1 634 aa11.96□□□□□ -0.49
SLF2-201ENST00000238961 BICDL1Q6ZP65 573 aa11.96□□□□□ -0.49
SLF2-201ENST00000238961 FAM184BQ9ULE4 1060 aa11.96□□□□□ -0.49
SLF2-201ENST00000238961 PDE3BQ13370 1112 aa11.96□□□□□ -0.49
SLF2-201ENST00000238961 PRPF4BQ13523 1007 aaKnown RBP11.96□□□□□ -0.49
SLF2-201ENST00000238961 FKBP15Q5T1M5 1219 aa11.96□□□□□ -0.49
SLF2-201ENST00000238961 MICALCLQ6ZW33 695 aa11.96□□□□□ -0.49
SLF2-201ENST00000238961 SURF6O75683 361 aaKnown RBP11.96□□□□□ -0.5
SLF2-201ENST00000238961 ZNF526Q8TF50 670 aaPredicted RBP11.96□□□□□ -0.5
SLF2-201ENST00000238961 CUL5Q93034 780 aa11.96□□□□□ -0.5
SLF2-201ENST00000238961 FEZ2Q9UHY8 353 aaPredicted RBP11.96□□□□□ -0.5
SLF2-201ENST00000238961 CCDC6Q16204 474 aa11.95□□□□□ -0.5
SLF2-201ENST00000238961 A0A1W2PRG0 241 aa11.95□□□□□ -0.5
SLF2-201ENST00000238961 PRPF40AO75400 957 aaKnown RBP11.95□□□□□ -0.5
SLF2-201ENST00000238961 CCDC192P0DO97 292 aa11.95□□□□□ -0.5
SLF2-201ENST00000238961 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
SLF2-201ENST00000238961 PFDN4Q9NQP4 134 aa11.95□□□□□ -0.5
SLF2-201ENST00000238961 SPTY2D1Q68D10 685 aaPredicted RBP11.95□□□□□ -0.5
SLF2-201ENST00000238961 SYNCQ9H7C4 482 aa11.95□□□□□ -0.5
SLF2-201ENST00000238961 MAP9Q49MG5 647 aa11.95□□□□□ -0.5
SLF2-201ENST00000238961 FKBP4Q02790 459 aaKnown RBP eCLIP11.95□□□□□ -0.5
SLF2-201ENST00000238961 HLTFQ14527 1009 aaKnown RBP eCLIP11.95□□□□□ -0.5
SLF2-201ENST00000238961 EVC2Q86UK5 1308 aa11.95□□□□□ -0.5
SLF2-201ENST00000238961 NUP155O75694 1391 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 SPECC1LQ69YQ0 1117 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 NLRP13Q86W25 1043 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 UTP14AQ9BVJ6 771 aaKnown RBP11.94□□□□□ -0.5
SLF2-201ENST00000238961 PHLDB1Q86UU1 1377 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 KIF20AO95235 890 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 DDX46Q7L014 1031 aaKnown RBP11.94□□□□□ -0.5
SLF2-201ENST00000238961 PAIP2Q9BPZ3 127 aaKnown RBP11.94□□□□□ -0.5
SLF2-201ENST00000238961 RSPH3Q86UC2 560 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 MRVI1Q9Y6F6 885 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 CCDC63Q8NA47 563 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 VPS8Q8N3P4 1428 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 TCHPQ9BT92 498 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 C22orf23Q9BZE7 217 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 GBP3Q9H0R5 595 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 ZSCAN25Q6NSZ9 544 aa11.94□□□□□ -0.5
SLF2-201ENST00000238961 IQCGQ9H095 443 aaKnown RBP11.94□□□□□ -0.5
SLF2-201ENST00000238961 CDC45O75419 566 aa11.93□□□□□ -0.5
SLF2-201ENST00000238961 CDKL5O76039 1030 aa11.93□□□□□ -0.5
SLF2-201ENST00000238961 POLR3DP05423 398 aaPredicted RBP11.93□□□□□ -0.5
SLF2-201ENST00000238961 LRP2BPQ9P2M1 347 aa11.93□□□□□ -0.5
SLF2-201ENST00000238961 HMOX1P09601 288 aa11.93□□□□□ -0.5
SLF2-201ENST00000238961 ZBTB16Q05516 673 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms