RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 MACROD2A1Z1Q3 448 aa8.8□□□□□ -1
PRDM2-201ENST00000235372 CRACR2BQ8N4Y2 399 aaPredicted RBP8.8□□□□□ -1
PRDM2-201ENST00000235372 DDX11Q96FC9 970 aa8.8□□□□□ -1
PRDM2-201ENST00000235372 FSD2A1L4K1 749 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 TMCO5BA8MYB1 307 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 FKBP15Q5T1M5 1219 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 PRPF31Q8WWY3 499 aaKnown RBP8.79□□□□□ -1
PRDM2-201ENST00000235372 ZNF428Q96B54 188 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 MYH10P35580 1976 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 PPP1R14CQ8TAE6 165 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 GBP3Q9H0R5 595 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 PLEKHO1Q53GL0 409 aaPredicted RBP8.79□□□□□ -1
PRDM2-201ENST00000235372 SMTNL1A8MU46 457 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 GNAI3P08754 354 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 MICALCLQ6ZW33 695 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 LUZP1Q86V48 1076 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 PKNOX2Q96KN3 472 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 NUTM2BA6NNL0 878 aaPredicted RBP8.79□□□□□ -1
PRDM2-201ENST00000235372 NUTM2EB1AL46 878 aaPredicted RBP8.79□□□□□ -1
PRDM2-201ENST00000235372 CACNA2D4Q7Z3S7 1137 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 NUTM2AQ8IVF1 878 aaPredicted RBP8.79□□□□□ -1
PRDM2-201ENST00000235372 ODF2LQ9ULJ1 636 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 IKBKGQ9Y6K9 419 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 SURF6O75683 361 aaKnown RBP8.79□□□□□ -1
PRDM2-201ENST00000235372 CEP135Q66GS9 1140 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 LNPKQ9C0E8 428 aa8.79□□□□□ -1
PRDM2-201ENST00000235372 ERICH4A6NGS2 130 aa8.78□□□□□ -1
PRDM2-201ENST00000235372 CETN1Q12798 172 aa8.78□□□□□ -1
PRDM2-201ENST00000235372 MRE11P49959 708 aa8.78□□□□□ -1
PRDM2-201ENST00000235372 CABP4P57796 275 aa8.78□□□□□ -1
PRDM2-201ENST00000235372 ARHGAP29Q52LW3 1261 aa8.78□□□□□ -1
PRDM2-201ENST00000235372 CYP46A1Q9Y6A2 500 aa8.78□□□□□ -1
PRDM2-201ENST00000235372 NDC80O14777 642 aa8.78□□□□□ -1
PRDM2-201ENST00000235372 FMN1Q68DA7 1419 aa8.78□□□□□ -1
PRDM2-201ENST00000235372 TNIKQ9UKE5 1360 aa8.78□□□□□ -1
PRDM2-201ENST00000235372 RRP1P56182 461 aaKnown RBP8.78□□□□□ -1
PRDM2-201ENST00000235372 UBA5Q9GZZ9 404 aa8.78□□□□□ -1
PRDM2-201ENST00000235372 FIBPO43427 364 aa8.77□□□□□ -1
PRDM2-201ENST00000235372 ACTN2P35609 894 aa8.77□□□□□ -1
PRDM2-201ENST00000235372 DDX12PQ92771 950 aa8.77□□□□□ -1
PRDM2-201ENST00000235372 CARMIL1Q5VZK9 1371 aa8.77□□□□□ -1
PRDM2-201ENST00000235372 UQCRHLA0A096LP55 91 aa8.77□□□□□ -1.01
PRDM2-201ENST00000235372 TATP17735 454 aaPredicted RBP8.77□□□□□ -1.01
PRDM2-201ENST00000235372 RUNDC1Q96C34 613 aa8.77□□□□□ -1.01
PRDM2-201ENST00000235372 TRERF1Q96PN7 1200 aa8.77□□□□□ -1.01
PRDM2-201ENST00000235372 SRRTQ9BXP5 876 aaKnown RBP8.77□□□□□ -1.01
PRDM2-201ENST00000235372 RAB34Q9BZG1 259 aa8.77□□□□□ -1.01
PRDM2-201ENST00000235372 STK3Q13188 491 aa8.77□□□□□ -1.01
PRDM2-201ENST00000235372 RAI14Q9P0K7 980 aa8.77□□□□□ -1.01
PRDM2-201ENST00000235372 LRP2BPQ9P2M1 347 aa8.77□□□□□ -1.01
PRDM2-201ENST00000235372 HMOX1P09601 288 aa8.77□□□□□ -1.01
PRDM2-201ENST00000235372 OTUD6BQ8N6M0 293 aa8.77□□□□□ -1.01
PRDM2-201ENST00000235372 PPP1R9BQ96SB3 815 aa8.77□□□□□ -1.01
PRDM2-201ENST00000235372 UTP14AQ9BVJ6 771 aaKnown RBP8.77□□□□□ -1.01
PRDM2-201ENST00000235372 RRBP1Q9P2E9 1410 aaKnown RBP8.76□□□□□ -1.01
PRDM2-201ENST00000235372 FKBP4Q02790 459 aaKnown RBP eCLIP8.76□□□□□ -1.01
PRDM2-201ENST00000235372 GAS2L2Q8NHY3 880 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 IGHMBP2P38935 993 aaKnown RBP8.76□□□□□ -1.01
PRDM2-201ENST00000235372 VTI1AQ96AJ9 217 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 CTNNA3Q9UI47 895 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 NUTM2GQ5VZR2 741 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.76□□□□□ -1.01
PRDM2-201ENST00000235372 CUX2O14529 1486 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 AAMPQ13685 434 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 PDS5BQ9NTI5 1447 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 TTC21AQ8NDW8 1320 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 POLR3DP05423 398 aaPredicted RBP8.76□□□□□ -1.01
PRDM2-201ENST00000235372 RFX1P22670 979 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 APBB1IPQ7Z5R6 666 aaPredicted RBP8.76□□□□□ -1.01
PRDM2-201ENST00000235372 ABTB2Q8N961 1025 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 NAP1L3Q99457 506 aaPredicted RBP8.76□□□□□ -1.01
PRDM2-201ENST00000235372 TMEM266Q2M3C6 531 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 ANAPC4Q9UJX5 808 aa8.76□□□□□ -1.01
PRDM2-201ENST00000235372 LIG1P18858 919 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 KRT85P78386 507 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 CASQ1P31415 396 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 PSMC4P43686 418 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 SPECC1LQ69YQ0 1117 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 KIF20AO95235 890 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 NEK4P51957 841 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 SNX16P57768 344 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 MAP7D1Q3KQU3 841 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 C16orf71Q8IYS4 520 aaPredicted RBP8.75□□□□□ -1.01
PRDM2-201ENST00000235372 BBXQ8WY36 941 aaPredicted RBP8.75□□□□□ -1.01
PRDM2-201ENST00000235372 NOL3O60936 208 aaKnown RBP8.75□□□□□ -1.01
PRDM2-201ENST00000235372 GPATCH11Q8N954 259 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 PRPF40AO75400 957 aaKnown RBP8.75□□□□□ -1.01
PRDM2-201ENST00000235372 GNAI2P04899 355 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 SPECC1Q5M775 1068 aa8.75□□□□□ -1.01
PRDM2-201ENST00000235372 PUF60Q9UHX1 559 aaKnown RBP8.75□□□□□ -1.01
PRDM2-201ENST00000235372 TPD52P55327 224 aaPredicted RBP8.74□□□□□ -1.01
PRDM2-201ENST00000235372 TOM1L2Q6ZVM7 507 aa8.74□□□□□ -1.01
PRDM2-201ENST00000235372 MKRN1Q9UHC7 482 aaKnown RBP8.74□□□□□ -1.01
PRDM2-201ENST00000235372 ZNF652Q9Y2D9 606 aa8.74□□□□□ -1.01
PRDM2-201ENST00000235372 RNF187Q5TA31 235 aaPredicted RBP8.74□□□□□ -1.01
PRDM2-201ENST00000235372 STXBP4Q6ZWJ1 553 aa8.74□□□□□ -1.01
PRDM2-201ENST00000235372 IPO4Q8TEX9 1081 aaKnown RBP8.74□□□□□ -1.01
PRDM2-201ENST00000235372 NAA15Q9BXJ9 866 aaKnown RBP8.74□□□□□ -1.01
PRDM2-201ENST00000235372 UPF3BQ9BZI7 483 aaKnown RBP8.74□□□□□ -1.01
PRDM2-201ENST00000235372 SYNCQ9H7C4 482 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms