RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
MDH1-201ENST00000233114 IFT57Q9NWB7 429 aa12.53□□□□□ -0.4
MDH1-201ENST00000233114 TNNQ9UQP3 1299 aa12.53□□□□□ -0.4
MDH1-201ENST00000233114 PIK3R4Q99570 1358 aa12.53□□□□□ -0.4
MDH1-201ENST00000233114 PTCH1Q13635 1447 aa12.52□□□□□ -0.4
MDH1-201ENST00000233114 IL13P35225 146 aa12.52□□□□□ -0.4
MDH1-201ENST00000233114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.4
MDH1-201ENST00000233114 NUDT16Q96DE0 195 aaKnown RBP12.52□□□□□ -0.4
MDH1-201ENST00000233114 PLEKHG1Q9ULL1 1385 aa12.52□□□□□ -0.4
MDH1-201ENST00000233114 GNAI1P63096 354 aa12.51□□□□□ -0.41
MDH1-201ENST00000233114 SMC5Q8IY18 1101 aa12.51□□□□□ -0.41
MDH1-201ENST00000233114 COG3Q96JB2 828 aa12.51□□□□□ -0.41
MDH1-201ENST00000233114 IER5LQ5T953 404 aa12.51□□□□□ -0.41
MDH1-201ENST00000233114 ZBTB40Q9NUA8 1239 aa12.51□□□□□ -0.41
MDH1-201ENST00000233114 NOB1Q9ULX3 412 aaKnown RBP12.51□□□□□ -0.41
MDH1-201ENST00000233114 ADAMTS13Q76LX8 1427 aa12.5□□□□□ -0.41
MDH1-201ENST00000233114 NALCNQ8IZF0 1738 aa12.5□□□□□ -0.41
MDH1-201ENST00000233114 ZNF853P0CG23 659 aa12.5□□□□□ -0.41
MDH1-201ENST00000233114 ITPRIPQ8IWB1 547 aa12.5□□□□□ -0.41
MDH1-201ENST00000233114 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
MDH1-201ENST00000233114 MLECQ14165 292 aa12.49□□□□□ -0.41
MDH1-201ENST00000233114 TBC1D32Q96NH3 1257 aa12.49□□□□□ -0.41
MDH1-201ENST00000233114 NME9Q86XW9 330 aa12.48□□□□□ -0.41
MDH1-201ENST00000233114 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
MDH1-201ENST00000233114 DIP2AQ14689 1571 aa12.48□□□□□ -0.41
MDH1-201ENST00000233114 OVOS2A0A0J9YW53 1432 aa12.48□□□□□ -0.41
MDH1-201ENST00000233114 OVOS2Q6IE36 1432 aa12.48□□□□□ -0.41
MDH1-201ENST00000233114 HAP1P54257 671 aaPredicted RBP12.48□□□□□ -0.41
MDH1-201ENST00000233114 NFKBIBQ15653 356 aa12.48□□□□□ -0.41
MDH1-201ENST00000233114 TXNDC2Q86VQ3 553 aa12.48□□□□□ -0.41
MDH1-201ENST00000233114 TMEM57Q8N5G2 664 aa12.48□□□□□ -0.41
MDH1-201ENST00000233114 EMILIN1Q9Y6C2 1016 aa12.48□□□□□ -0.41
MDH1-201ENST00000233114 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
MDH1-201ENST00000233114 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
MDH1-201ENST00000233114 FAM212AQ96EL1 285 aa12.47□□□□□ -0.41
MDH1-201ENST00000233114 SLIT1O75093 1534 aa12.47□□□□□ -0.41
MDH1-201ENST00000233114 ROBO2Q9HCK4 1378 aa12.47□□□□□ -0.41
MDH1-201ENST00000233114 RIMS1Q86UR5 1692 aaKnown RBP12.46□□□□□ -0.41
MDH1-201ENST00000233114 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.46□□□□□ -0.41
MDH1-201ENST00000233114 VAMP4O75379 141 aa12.46□□□□□ -0.41
MDH1-201ENST00000233114 MRPL50Q8N5N7 158 aaKnown RBP12.46□□□□□ -0.41
MDH1-201ENST00000233114 CFAP44Q96MT7 982 aa12.46□□□□□ -0.41
MDH1-201ENST00000233114 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.42
MDH1-201ENST00000233114 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
MDH1-201ENST00000233114 ABCC4O15439 1325 aa12.45□□□□□ -0.42
MDH1-201ENST00000233114 PRR36Q9H6K5 1346 aa12.45□□□□□ -0.42
MDH1-201ENST00000233114 USP31Q70CQ4 1352 aa12.45□□□□□ -0.42
MDH1-201ENST00000233114 RGPD1P0DJD0 1748 aa12.45□□□□□ -0.42
MDH1-201ENST00000233114 USP6P35125 1406 aa12.45□□□□□ -0.42
MDH1-201ENST00000233114 API5Q9BZZ5 524 aaKnown RBP12.45□□□□□ -0.42
MDH1-201ENST00000233114 HMOX1P09601 288 aa12.44□□□□□ -0.42
MDH1-201ENST00000233114 SLC4A3P48751 1232 aa12.44□□□□□ -0.42
MDH1-201ENST00000233114 NUCB1Q02818 461 aa12.44□□□□□ -0.42
MDH1-201ENST00000233114 GCC1Q96CN9 775 aa12.44□□□□□ -0.42
MDH1-201ENST00000233114 TTC21BQ7Z4L5 1316 aa12.44□□□□□ -0.42
MDH1-201ENST00000233114 MBIPQ9NS73 344 aa12.43□□□□□ -0.42
MDH1-201ENST00000233114 TTC21AQ8NDW8 1320 aa12.43□□□□□ -0.42
MDH1-201ENST00000233114 SSH2Q76I76 1423 aa12.43□□□□□ -0.42
MDH1-201ENST00000233114 KIAA0232Q92628 1395 aa12.42□□□□□ -0.42
MDH1-201ENST00000233114 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
MDH1-201ENST00000233114 ARHGEF10O15013 1369 aa12.42□□□□□ -0.42
MDH1-201ENST00000233114 ZBTB7BO15156 539 aaPredicted RBP12.42□□□□□ -0.42
MDH1-201ENST00000233114 TWISTNBQ3B726 338 aaPredicted RBP12.42□□□□□ -0.42
MDH1-201ENST00000233114 GSE1Q14687 1217 aa12.41□□□□□ -0.42
MDH1-201ENST00000233114 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
MDH1-201ENST00000233114 EID1Q9Y6B2 187 aa12.41□□□□□ -0.42
MDH1-201ENST00000233114 FMN2Q9NZ56 1722 aa12.41□□□□□ -0.42
MDH1-201ENST00000233114 CHD1LQ86WJ1 897 aa12.4□□□□□ -0.42
MDH1-201ENST00000233114 TBX22Q9Y458 520 aa12.4□□□□□ -0.42
MDH1-201ENST00000233114 USP54Q70EL1 1684 aa12.4□□□□□ -0.42
MDH1-201ENST00000233114 ANKARQ7Z5J8 1434 aa12.4□□□□□ -0.43
MDH1-201ENST00000233114 PEAK1Q9H792 1746 aa12.39□□□□□ -0.43
MDH1-201ENST00000233114 ACEP12821 1306 aa12.39□□□□□ -0.43
MDH1-201ENST00000233114 FBLN1P23142 703 aa12.39□□□□□ -0.43
MDH1-201ENST00000233114 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
MDH1-201ENST00000233114 RRS1Q15050 365 aaKnown RBP12.39□□□□□ -0.43
MDH1-201ENST00000233114 BMP2KLQ5H9B9 411 aa12.39□□□□□ -0.43
MDH1-201ENST00000233114 XRN1Q8IZH2 1706 aaKnown RBP12.39□□□□□ -0.43
MDH1-201ENST00000233114 PTPRUQ92729 1446 aa12.39□□□□□ -0.43
MDH1-201ENST00000233114 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
MDH1-201ENST00000233114 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
MDH1-201ENST00000233114 THUMPD2Q9BTF0 503 aaKnown RBP12.38□□□□□ -0.43
MDH1-201ENST00000233114 ANTXR1Q9H6X2 564 aa12.38□□□□□ -0.43
MDH1-201ENST00000233114 NCKAP5LQ9HCH0 1330 aa12.37□□□□□ -0.43
MDH1-201ENST00000233114 CHL1O00533 1208 aa12.37□□□□□ -0.43
MDH1-201ENST00000233114 PLCG2P16885 1265 aa12.37□□□□□ -0.43
MDH1-201ENST00000233114 LTKP29376 864 aa12.37□□□□□ -0.43
MDH1-201ENST00000233114 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
MDH1-201ENST00000233114 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
MDH1-201ENST00000233114 TBC1D2Q9BYX2 928 aa12.37□□□□□ -0.43
MDH1-201ENST00000233114 SBNO1A3KN83 1393 aa12.37□□□□□ -0.43
MDH1-201ENST00000233114 FER1L4A9Z1Z3 1794 aa12.36□□□□□ -0.43
MDH1-201ENST00000233114 INTS3Q68E01 1043 aaKnown RBP12.36□□□□□ -0.43
MDH1-201ENST00000233114 FLT4P35916 1363 aa12.36□□□□□ -0.43
MDH1-201ENST00000233114 KDRP35968 1356 aa12.36□□□□□ -0.43
MDH1-201ENST00000233114 PTPRCP08575 1304 aa12.36□□□□□ -0.43
MDH1-201ENST00000233114 TMEM132AQ24JP5 1023 aa12.35□□□□□ -0.43
MDH1-201ENST00000233114 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
MDH1-201ENST00000233114 C8orf58Q8NAV2 365 aa12.35□□□□□ -0.43
MDH1-201ENST00000233114 FRAT2O75474 233 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms