RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CYP27B1O15528 508 aa18.72■□□□□ 0.59
VEGFA-201ENST00000230480 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
VEGFA-201ENST00000230480 CNGB1Q14028 1251 aaPredicted RBP18.72■□□□□ 0.59
VEGFA-201ENST00000230480 AEBP1Q8IUX7 1158 aa18.72■□□□□ 0.59
VEGFA-201ENST00000230480 PROM2Q8N271 834 aa18.72■□□□□ 0.59
VEGFA-201ENST00000230480 NHSQ6T4R5 1651 aa18.71■□□□□ 0.59
VEGFA-201ENST00000230480 EZH2Q15910 746 aaKnown RBP18.71■□□□□ 0.59
VEGFA-201ENST00000230480 ZCRB1Q8TBF4 217 aaKnown RBP18.71■□□□□ 0.59
VEGFA-201ENST00000230480 RREB1Q92766 1687 aa18.7■□□□□ 0.58
VEGFA-201ENST00000230480 BCL11BQ9C0K0 894 aaPredicted RBP18.7■□□□□ 0.58
VEGFA-201ENST00000230480 APBA3O96018 575 aa18.69■□□□□ 0.58
VEGFA-201ENST00000230480 DDX10Q13206 875 aaKnown RBP18.69■□□□□ 0.58
VEGFA-201ENST00000230480 DDX54Q8TDD1 881 aaKnown RBP18.69■□□□□ 0.58
VEGFA-201ENST00000230480 TOGARAM1Q9Y4F4 1720 aa18.69■□□□□ 0.58
VEGFA-201ENST00000230480 KDRP35968 1356 aa18.68■□□□□ 0.58
VEGFA-201ENST00000230480 BTAF1O14981 1849 aa18.68■□□□□ 0.58
VEGFA-201ENST00000230480 PPP2R1AP30153 589 aa18.68■□□□□ 0.58
VEGFA-201ENST00000230480 ACSBG1Q96GR2 724 aa18.68■□□□□ 0.58
VEGFA-201ENST00000230480 NUP188Q5SRE5 1749 aa18.67■□□□□ 0.58
VEGFA-201ENST00000230480 DOT1LQ8TEK3 1739 aa18.67■□□□□ 0.58
VEGFA-201ENST00000230480 TATP17735 454 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-201ENST00000230480 PARD3Q8TEW0 1356 aa18.67■□□□□ 0.58
VEGFA-201ENST00000230480 RAPGEF4Q8WZA2 1011 aa18.66■□□□□ 0.58
VEGFA-201ENST00000230480 RGPD3A6NKT7 1758 aaPredicted RBP18.65■□□□□ 0.58
VEGFA-201ENST00000230480 RGPD4Q7Z3J3 1758 aa18.65■□□□□ 0.58
VEGFA-201ENST00000230480 PLSCR1O15162 318 aa18.65■□□□□ 0.58
VEGFA-201ENST00000230480 BAG6P46379 1132 aa18.65■□□□□ 0.58
VEGFA-201ENST00000230480 ITGB4P16144 1822 aa18.65■□□□□ 0.58
VEGFA-201ENST00000230480 NKX1-1Q15270 411 aaPredicted RBP18.64■□□□□ 0.57
VEGFA-201ENST00000230480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.64■□□□□ 0.572e-31■□□□□ 9.6
VEGFA-201ENST00000230480 SF3B2Q13435 895 aaKnown RBP18.63■□□□□ 0.57
VEGFA-201ENST00000230480 SULT6B1Q6IMI4 303 aa18.63■□□□□ 0.57
VEGFA-201ENST00000230480 PRIM1P49642 420 aaKnown RBP18.62■□□□□ 0.57
VEGFA-201ENST00000230480 DIAPH1O60610 1272 aaKnown RBP18.6■□□□□ 0.57
VEGFA-201ENST00000230480 PHKG2P15735 406 aa18.6■□□□□ 0.57
VEGFA-201ENST00000230480 PLEKHG2Q9H7P9 1386 aa18.59■□□□□ 0.57
VEGFA-201ENST00000230480 PCDH11XQ9BZA7 1347 aa18.59■□□□□ 0.57
VEGFA-201ENST00000230480 PCDH11YQ9BZA8 1340 aa18.59■□□□□ 0.57
VEGFA-201ENST00000230480 HMOX1P09601 288 aa18.59■□□□□ 0.57
VEGFA-201ENST00000230480 LY75O60449 1722 aa18.58■□□□□ 0.57
VEGFA-201ENST00000230480 LRRC4BQ9NT99 713 aa18.58■□□□□ 0.56
VEGFA-201ENST00000230480 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
VEGFA-201ENST00000230480 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
VEGFA-201ENST00000230480 PAPPAQ13219 1627 aa18.56■□□□□ 0.56
VEGFA-201ENST00000230480 TXNRD1Q16881 649 aa18.56■□□□□ 0.56
VEGFA-201ENST00000230480 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
VEGFA-201ENST00000230480 VIRMAQ69YN4 1812 aaKnown RBP18.55■□□□□ 0.56
VEGFA-201ENST00000230480 PSDA5PKW4 1024 aaPredicted RBP18.54■□□□□ 0.56
VEGFA-201ENST00000230480 IFNL2Q8IZJ0 200 aa18.54■□□□□ 0.56
VEGFA-201ENST00000230480 PIGBQ92521 554 aa18.54■□□□□ 0.56
VEGFA-201ENST00000230480 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
VEGFA-201ENST00000230480 ZNF316A6NFI3 1004 aaPredicted RBP18.53■□□□□ 0.56
VEGFA-201ENST00000230480 KCNQ4P56696 695 aa18.53■□□□□ 0.56
VEGFA-201ENST00000230480 MTHFSDQ2M296 383 aaKnown RBP18.53■□□□□ 0.56
VEGFA-201ENST00000230480 PLEKHO1Q53GL0 409 aaPredicted RBP18.53■□□□□ 0.56
VEGFA-201ENST00000230480 PHACTR3Q96KR7 559 aa18.53■□□□□ 0.56
VEGFA-201ENST00000230480 SCN11AQ9UI33 1791 aa18.53■□□□□ 0.56
VEGFA-201ENST00000230480 RSPH6AQ9H0K4 717 aa18.52■□□□□ 0.56
VEGFA-201ENST00000230480 ZNF530Q6P9A1 599 aaPredicted RBP18.51■□□□□ 0.55
VEGFA-201ENST00000230480 PDGFDQ9GZP0 370 aaPredicted RBP18.51■□□□□ 0.55
VEGFA-201ENST00000230480 SRCAPQ6ZRS2 3230 aa18.5■□□□□ 0.55
VEGFA-201ENST00000230480 R3HDM1Q15032 1099 aaKnown RBP18.5■□□□□ 0.55
VEGFA-201ENST00000230480 RALBP1Q15311 655 aa18.5■□□□□ 0.55
VEGFA-201ENST00000230480 AMOTQ4VCS5 1084 aa18.5■□□□□ 0.55
VEGFA-201ENST00000230480 MPRIPQ6WCQ1 1025 aa18.5■□□□□ 0.55
VEGFA-201ENST00000230480 SYTL4Q96C24 671 aaPredicted RBP18.5■□□□□ 0.55
VEGFA-201ENST00000230480 LGR6Q9HBX8 967 aa18.5■□□□□ 0.55
VEGFA-201ENST00000230480 U2SURPO15042 1029 aaKnown RBP18.49■□□□□ 0.55
VEGFA-201ENST00000230480 PRKRIP1Q9H875 184 aaPredicted RBP18.49■□□□□ 0.55
VEGFA-201ENST00000230480 TAF1LQ8IZX4 1826 aa18.49■□□□□ 0.55
VEGFA-201ENST00000230480 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
VEGFA-201ENST00000230480 TUBGCP6Q96RT7 1819 aa18.47■□□□□ 0.55
VEGFA-201ENST00000230480 ZNF827Q17R98 1081 aa18.47■□□□□ 0.55
VEGFA-201ENST00000230480 SLC4A9Q96Q91 983 aa18.47■□□□□ 0.55
VEGFA-201ENST00000230480 ATG3Q9NT62 314 aa18.47■□□□□ 0.55
VEGFA-201ENST00000230480 ASAP1Q9ULH1 1129 aa18.47■□□□□ 0.55
VEGFA-201ENST00000230480 AKT1S1Q96B36 256 aa18.46■□□□□ 0.55
VEGFA-201ENST00000230480 DCAF5Q96JK2 942 aa18.46■□□□□ 0.55
VEGFA-201ENST00000230480 ERVV-2B6SEH9 535 aa18.45■□□□□ 0.54
VEGFA-201ENST00000230480 PRKAR2BP31323 418 aa18.45■□□□□ 0.54
VEGFA-201ENST00000230480 IL17REQ8NFR9 667 aa18.45■□□□□ 0.54
VEGFA-201ENST00000230480 CFAP53Q96M91 514 aa18.45■□□□□ 0.54
VEGFA-201ENST00000230480 PLEKHF1Q96S99 279 aa18.45■□□□□ 0.54
VEGFA-201ENST00000230480 CCDC184Q52MB2 194 aa18.44■□□□□ 0.54
VEGFA-201ENST00000230480 AKAP4Q5JQC9 854 aa18.44■□□□□ 0.54
VEGFA-201ENST00000230480 MYBBP1AQ9BQG0 1328 aaKnown RBP18.44■□□□□ 0.54
VEGFA-201ENST00000230480 PALLDQ8WX93 1383 aa18.43■□□□□ 0.54
VEGFA-201ENST00000230480 RNMTO43148 476 aaKnown RBP18.43■□□□□ 0.54
VEGFA-201ENST00000230480 FCHSD2O94868 740 aa18.43■□□□□ 0.54
VEGFA-201ENST00000230480 U2AF1L5P0DN76 240 aaPredicted RBP18.43■□□□□ 0.54
VEGFA-201ENST00000230480 U2AF1Q01081 240 aaKnown RBP eCLIP18.43■□□□□ 0.54
VEGFA-201ENST00000230480 SLC15A2Q16348 729 aa18.43■□□□□ 0.54
VEGFA-201ENST00000230480 AMIGO3Q86WK7 504 aa18.43■□□□□ 0.54
VEGFA-201ENST00000230480 MRC1P22897 1456 aa18.43■□□□□ 0.54
VEGFA-201ENST00000230480 SIPA1L3O60292 1781 aaPredicted RBP18.42■□□□□ 0.54
VEGFA-201ENST00000230480 SLC27A3Q5K4L6 730 aa18.42■□□□□ 0.54
VEGFA-201ENST00000230480 NFATC2IPQ8NCF5 419 aa18.42■□□□□ 0.54
VEGFA-201ENST00000230480 DLG5Q8TDM6 1919 aa18.42■□□□□ 0.54
VEGFA-201ENST00000230480 ITPK1Q13572 414 aa18.41■□□□□ 0.54
VEGFA-201ENST00000230480 TMOD3Q9NYL9 352 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms