RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 STK3Q13188 491 aa16.31■□□□□ 0.2
HCFC2-201ENST00000229330 ANKRD30BQ9BXX2 1392 aa16.31■□□□□ 0.2
HCFC2-201ENST00000229330 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
HCFC2-201ENST00000229330 CCT4P50991 539 aaKnown RBP16.3■□□□□ 0.2
HCFC2-201ENST00000229330 PPFIBP1Q86W92 1011 aa16.3■□□□□ 0.2
HCFC2-201ENST00000229330 CLIP2Q9UDT6 1046 aa16.3■□□□□ 0.2
HCFC2-201ENST00000229330 POLR3GO15318 223 aaPredicted RBP16.3■□□□□ 0.2
HCFC2-201ENST00000229330 DHX29Q7Z478 1369 aaKnown RBP16.3■□□□□ 0.2
HCFC2-201ENST00000229330 CCDC30Q5VVM6 783 aa16.3■□□□□ 0.2
HCFC2-201ENST00000229330 ATF3P18847 181 aa16.29■□□□□ 0.2
HCFC2-201ENST00000229330 SFPQP23246 707 aaKnown RBP eCLIP16.29■□□□□ 0.2
HCFC2-201ENST00000229330 KRT222Q8N1A0 295 aa16.29■□□□□ 0.2
HCFC2-201ENST00000229330 NEMFO60524 1076 aa16.29■□□□□ 0.2
HCFC2-201ENST00000229330 BMP2KLQ5H9B9 411 aa16.29■□□□□ 0.2
HCFC2-201ENST00000229330 JMYQ8N9B5 988 aa16.29■□□□□ 0.2
HCFC2-201ENST00000229330 RPGRIP1LQ68CZ1 1315 aa16.28■□□□□ 0.2
HCFC2-201ENST00000229330 BRPF1P55201 1214 aaPredicted RBP16.28■□□□□ 0.2
HCFC2-201ENST00000229330 PAXBP1Q9Y5B6 917 aa16.28■□□□□ 0.2
HCFC2-201ENST00000229330 JAKMIP1Q96N16 626 aaKnown RBP16.28■□□□□ 0.2
HCFC2-201ENST00000229330 MAPKBP1O60336 1514 aa16.28■□□□□ 0.2
HCFC2-201ENST00000229330 SMTNL1A8MU46 457 aa16.28■□□□□ 0.2
HCFC2-201ENST00000229330 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
HCFC2-201ENST00000229330 BMS1Q14692 1282 aaKnown RBP16.28■□□□□ 0.2
HCFC2-201ENST00000229330 DHX16O60231 1041 aaKnown RBP16.28■□□□□ 0.2
HCFC2-201ENST00000229330 CDK19Q9BWU1 502 aa16.28■□□□□ 0.2
HCFC2-201ENST00000229330 SSH1Q8WYL5 1049 aa16.27■□□□□ 0.2
HCFC2-201ENST00000229330 GBP3Q9H0R5 595 aa16.27■□□□□ 0.2
HCFC2-201ENST00000229330 ERICH2A1L162 156 aa16.27■□□□□ 0.2
HCFC2-201ENST00000229330 TBC1D9Q6ZT07 1266 aa16.27■□□□□ 0.2
HCFC2-201ENST00000229330 DACH1Q9UI36 760 aa16.27■□□□□ 0.19
HCFC2-201ENST00000229330 BLOC1S2Q6QNY1 142 aa16.27■□□□□ 0.19
HCFC2-201ENST00000229330 DNAJC2Q99543 621 aaKnown RBP16.27■□□□□ 0.19
HCFC2-201ENST00000229330 MAP4K4O95819 1239 aaPredicted RBP16.26■□□□□ 0.19
HCFC2-201ENST00000229330 CD109Q6YHK3 1445 aa16.26■□□□□ 0.19
HCFC2-201ENST00000229330 ERC1Q8IUD2 1116 aa16.26■□□□□ 0.19
HCFC2-201ENST00000229330 CABP1Q9NZU7 370 aa16.26■□□□□ 0.19
HCFC2-201ENST00000229330 URI1O94763 535 aaPredicted RBP16.26■□□□□ 0.19
HCFC2-201ENST00000229330 SNX21Q969T3 373 aa16.26■□□□□ 0.19
HCFC2-201ENST00000229330 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
HCFC2-201ENST00000229330 ZSCAN12O43309 604 aa16.25■□□□□ 0.19
HCFC2-201ENST00000229330 GTF2E1P29083 439 aaPredicted RBP16.25■□□□□ 0.19
HCFC2-201ENST00000229330 ZNF830Q96NB3 372 aaPredicted RBP16.25■□□□□ 0.19
HCFC2-201ENST00000229330 THEMISQ8N1K5 641 aaPredicted RBP16.25■□□□□ 0.19
HCFC2-201ENST00000229330 GIMAP7Q8NHV1 300 aa16.25■□□□□ 0.19
HCFC2-201ENST00000229330 SCAND2PQ9GZW5 306 aaPredicted RBP16.25■□□□□ 0.19
HCFC2-201ENST00000229330 GDPD2Q9HCC8 539 aa16.25■□□□□ 0.19
HCFC2-201ENST00000229330 WASHC4Q2M389 1173 aa16.25■□□□□ 0.19
HCFC2-201ENST00000229330 NEUROD6Q96NK8 337 aa16.25■□□□□ 0.19
HCFC2-201ENST00000229330 TRMT1Q9NXH9 659 aaKnown RBP16.25■□□□□ 0.19
HCFC2-201ENST00000229330 GOLGA6L10A6NI86 522 aa16.24■□□□□ 0.19
HCFC2-201ENST00000229330 TMPOP42166 694 aaKnown RBP16.24■□□□□ 0.19
HCFC2-201ENST00000229330 FAM193AP78312 1265 aa16.24■□□□□ 0.19
HCFC2-201ENST00000229330 GPRASP1Q5JY77 1395 aa16.24■□□□□ 0.19
HCFC2-201ENST00000229330 FERMT3Q86UX7 667 aa16.24■□□□□ 0.19
HCFC2-201ENST00000229330 RAPGEF4Q8WZA2 1011 aa16.24■□□□□ 0.19
HCFC2-201ENST00000229330 CEP135Q66GS9 1140 aa16.24■□□□□ 0.19
HCFC2-201ENST00000229330 CCDC83Q8IWF9 413 aa16.24■□□□□ 0.19
HCFC2-201ENST00000229330 ANO10Q9NW15 660 aa16.24■□□□□ 0.19
HCFC2-201ENST00000229330 CASTP20810 708 aaKnown RBP16.24■□□□□ 0.19
HCFC2-201ENST00000229330 ALDH1L2Q3SY69 923 aa16.24■□□□□ 0.19
HCFC2-201ENST00000229330 ABTB2Q8N961 1025 aa16.24■□□□□ 0.19
HCFC2-201ENST00000229330 RAB3GAP1Q15042 981 aa16.23■□□□□ 0.19
HCFC2-201ENST00000229330 CWC27Q6UX04 472 aaKnown RBP16.23■□□□□ 0.19
HCFC2-201ENST00000229330 ADGRL1O94910 1474 aa16.23■□□□□ 0.19
HCFC2-201ENST00000229330 ZNHIT6Q9NWK9 470 aaKnown RBP16.23■□□□□ 0.19
HCFC2-201ENST00000229330 MYO6Q9UM54 1294 aa16.23■□□□□ 0.19
HCFC2-201ENST00000229330 HCLS1P14317 486 aaPredicted RBP16.22■□□□□ 0.19
HCFC2-201ENST00000229330 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
HCFC2-201ENST00000229330 CFAP100Q494V2 611 aa16.22■□□□□ 0.19
HCFC2-201ENST00000229330 NLRP2Q9NX02 1062 aa16.22■□□□□ 0.19
HCFC2-201ENST00000229330 TRIM27P14373 513 aa16.22■□□□□ 0.19
HCFC2-201ENST00000229330 XBP1P17861 261 aa16.22■□□□□ 0.19
HCFC2-201ENST00000229330 ESCO1Q5FWF5 840 aa16.22■□□□□ 0.19
HCFC2-201ENST00000229330 BRMS1Q9HCU9 246 aa16.22■□□□□ 0.19
HCFC2-201ENST00000229330 CASQ1P31415 396 aa16.22■□□□□ 0.19
HCFC2-201ENST00000229330 CKAP2LQ8IYA6 745 aa16.22■□□□□ 0.19
HCFC2-201ENST00000229330 SHTN1A0MZ66 631 aa16.21■□□□□ 0.19
HCFC2-201ENST00000229330 VPS53Q5VIR6 699 aa16.21■□□□□ 0.19
HCFC2-201ENST00000229330 SMC5Q8IY18 1101 aa16.21■□□□□ 0.19
HCFC2-201ENST00000229330 CENPHQ9H3R5 247 aa16.21■□□□□ 0.19
HCFC2-201ENST00000229330 MAGEC2Q9UBF1 373 aaPredicted RBP16.21■□□□□ 0.19
HCFC2-201ENST00000229330 KDM4AO75164 1064 aa16.21■□□□□ 0.19
HCFC2-201ENST00000229330 UBE2HP62256 183 aa16.21■□□□□ 0.19
HCFC2-201ENST00000229330 IQCEQ6IPM2 695 aa16.21■□□□□ 0.19
HCFC2-201ENST00000229330 TXLNBQ8N3L3 684 aa16.21■□□□□ 0.19
HCFC2-201ENST00000229330 FAM107BQ9H098 131 aa16.21■□□□□ 0.19
HCFC2-201ENST00000229330 TMX4Q9H1E5 349 aaPredicted RBP16.21■□□□□ 0.19
HCFC2-201ENST00000229330 ATP2B1P20020 1258 aa16.21■□□□□ 0.18
HCFC2-201ENST00000229330 GSDMDP57764 484 aa16.21■□□□□ 0.18
HCFC2-201ENST00000229330 CRACR2AQ9BSW2 395 aa16.21■□□□□ 0.18
HCFC2-201ENST00000229330 DDX19AQ9NUU7 478 aaKnown RBP16.21■□□□□ 0.18
HCFC2-201ENST00000229330 SMARCA5O60264 1052 aaPredicted RBP16.2■□□□□ 0.18
HCFC2-201ENST00000229330 RBM25P49756 843 aaKnown RBP16.2■□□□□ 0.18
HCFC2-201ENST00000229330 CCDC181Q5TID7 509 aa16.2■□□□□ 0.18
HCFC2-201ENST00000229330 SLC26A8Q96RN1 970 aa16.2■□□□□ 0.18
HCFC2-201ENST00000229330 PLCD4Q9BRC7 762 aa16.2■□□□□ 0.18
HCFC2-201ENST00000229330 THOC2Q8NI27 1593 aaKnown RBP16.2■□□□□ 0.18
HCFC2-201ENST00000229330 RTEL1-TNFRSF6BF6WH68 1400 aa16.2■□□□□ 0.18
HCFC2-201ENST00000229330 ARHGAP29Q52LW3 1261 aa16.2■□□□□ 0.18
HCFC2-201ENST00000229330 JAKMIP3Q5VZ66 844 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms