RNA–Protein interactions for RNA: ENST00000224073.5

EDF1-201, Transcript of endothelial differentiation related factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDF1, Length 640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-201ENST00000224073 SMG6Q86US8 1419 aaKnown RBP17.5■□□□□ 0.39
EDF1-201ENST00000224073 PRIM1P49642 420 aaKnown RBP17.5■□□□□ 0.39
EDF1-201ENST00000224073 KCNQ4P56696 695 aa17.5■□□□□ 0.39
EDF1-201ENST00000224073 RAPGEF4Q8WZA2 1011 aa17.49■□□□□ 0.39
EDF1-201ENST00000224073 BTAF1O14981 1849 aa17.49■□□□□ 0.39
EDF1-201ENST00000224073 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
EDF1-201ENST00000224073 RGPD3A6NKT7 1758 aaPredicted RBP17.48■□□□□ 0.39
EDF1-201ENST00000224073 RGPD4Q7Z3J3 1758 aa17.48■□□□□ 0.39
EDF1-201ENST00000224073 SHANK3Q9BYB0 1731 aa17.47■□□□□ 0.39
EDF1-201ENST00000224073 ZBTB7AO95365 584 aa17.47■□□□□ 0.39
EDF1-201ENST00000224073 TATP17735 454 aaPredicted RBP17.47■□□□□ 0.39
EDF1-201ENST00000224073 MAP2P11137 1827 aaKnown RBP17.47■□□□□ 0.39
EDF1-201ENST00000224073 LRRC4BQ9NT99 713 aa17.46■□□□□ 0.39
EDF1-201ENST00000224073 STK32BQ9NY57 414 aa17.46■□□□□ 0.39
EDF1-201ENST00000224073 DOT1LQ8TEK3 1739 aa17.45■□□□□ 0.38
EDF1-201ENST00000224073 CNGB1Q14028 1251 aaPredicted RBP17.45■□□□□ 0.38
EDF1-201ENST00000224073 SLC15A2Q16348 729 aa17.44■□□□□ 0.38
EDF1-201ENST00000224073 EYA1Q99502 592 aa17.44■□□□□ 0.38
EDF1-201ENST00000224073 ATF5Q9Y2D1 282 aaPredicted RBP17.44■□□□□ 0.38
EDF1-201ENST00000224073 KIF7Q2M1P5 1343 aa17.44■□□□□ 0.38
EDF1-201ENST00000224073 ZNF827Q17R98 1081 aa17.43■□□□□ 0.38
EDF1-201ENST00000224073 SPON1Q9HCB6 807 aa17.43■□□□□ 0.38
EDF1-201ENST00000224073 WASHC2AQ641Q2 1341 aa17.43■□□□□ 0.38
EDF1-201ENST00000224073 NSD2O96028 1365 aa17.42■□□□□ 0.38
EDF1-201ENST00000224073 CYP27B1O15528 508 aa17.42■□□□□ 0.38
EDF1-201ENST00000224073 EIF4A2Q14240 407 aaKnown RBP17.42■□□□□ 0.38
EDF1-201ENST00000224073 MORC1Q86VD1 984 aa17.42■□□□□ 0.38
EDF1-201ENST00000224073 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
EDF1-201ENST00000224073 KIF24Q5T7B8 1368 aa17.41■□□□□ 0.38
EDF1-201ENST00000224073 ANKRD26Q9UPS8 1709 aa17.41■□□□□ 0.38
EDF1-201ENST00000224073 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
EDF1-201ENST00000224073 CASZ1Q86V15 1759 aa17.4■□□□□ 0.38
EDF1-201ENST00000224073 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
EDF1-201ENST00000224073 PCDH11XQ9BZA7 1347 aa17.39■□□□□ 0.37
EDF1-201ENST00000224073 PCDH11YQ9BZA8 1340 aa17.39■□□□□ 0.37
EDF1-201ENST00000224073 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
EDF1-201ENST00000224073 CCNL1Q9UK58 526 aaPredicted RBP17.36■□□□□ 0.37
EDF1-201ENST00000224073 PTGER2P43116 358 aa17.35■□□□□ 0.37
EDF1-201ENST00000224073 CC2D1BQ5T0F9 858 aaKnown RBP17.35■□□□□ 0.37
EDF1-201ENST00000224073 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
EDF1-201ENST00000224073 NCAPD2Q15021 1401 aa17.34■□□□□ 0.37
EDF1-201ENST00000224073 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
EDF1-201ENST00000224073 AEBP1Q8IUX7 1158 aa17.34■□□□□ 0.37
EDF1-201ENST00000224073 SPG7Q9UQ90 795 aa17.34■□□□□ 0.37
EDF1-201ENST00000224073 TOGARAM1Q9Y4F4 1720 aa17.34■□□□□ 0.37
EDF1-201ENST00000224073 SLC27A3Q5K4L6 730 aa17.33■□□□□ 0.36
EDF1-201ENST00000224073 TFCP2L1Q9NZI6 479 aa17.33■□□□□ 0.36
EDF1-201ENST00000224073 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
EDF1-201ENST00000224073 PIGBQ92521 554 aa17.32■□□□□ 0.36
EDF1-201ENST00000224073 PNPLA7Q6ZV29 1317 aa17.31■□□□□ 0.36
EDF1-201ENST00000224073 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
EDF1-201ENST00000224073 MTFR1LQ9H019 292 aa17.31■□□□□ 0.36
EDF1-201ENST00000224073 LY75O60449 1722 aa17.3■□□□□ 0.36
EDF1-201ENST00000224073 PALLDQ8WX93 1383 aa17.3■□□□□ 0.36
EDF1-201ENST00000224073 IGSF1Q8N6C5 1336 aa17.3■□□□□ 0.36
EDF1-201ENST00000224073 MSH5O43196 834 aa17.3■□□□□ 0.36
EDF1-201ENST00000224073 PHKG2P15735 406 aa17.3■□□□□ 0.36
EDF1-201ENST00000224073 ITGB4P16144 1822 aa17.3■□□□□ 0.36
EDF1-201ENST00000224073 TUBGCP6Q96RT7 1819 aa17.29■□□□□ 0.36
EDF1-201ENST00000224073 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
EDF1-201ENST00000224073 MTHFSP49914 203 aa17.28■□□□□ 0.36
EDF1-201ENST00000224073 SULT6B1Q6IMI4 303 aa17.28■□□□□ 0.36
EDF1-201ENST00000224073 IFNL2Q8IZJ0 200 aa17.28■□□□□ 0.36
EDF1-201ENST00000224073 KLHL34Q8N239 644 aa17.28■□□□□ 0.36
EDF1-201ENST00000224073 IL13P35225 146 aa17.27■□□□□ 0.36
EDF1-201ENST00000224073 NKX1-1Q15270 411 aaPredicted RBP17.27■□□□□ 0.36
EDF1-201ENST00000224073 MSL1Q68DK7 614 aa17.27■□□□□ 0.36
EDF1-201ENST00000224073 SGIP1Q9BQI5 828 aa17.27■□□□□ 0.36
EDF1-201ENST00000224073 FHDC1Q9C0D6 1143 aaPredicted RBP17.27■□□□□ 0.36
EDF1-201ENST00000224073 TMOD3Q9NYL9 352 aa17.27■□□□□ 0.36
EDF1-201ENST00000224073 ASAP1Q9ULH1 1129 aa17.27■□□□□ 0.36
EDF1-201ENST00000224073 ZNF530Q6P9A1 599 aaPredicted RBP17.26■□□□□ 0.35
EDF1-201ENST00000224073 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.26■□□□□ 0.35
EDF1-201ENST00000224073 HMOX1P09601 288 aa17.25■□□□□ 0.35
EDF1-201ENST00000224073 AMIGO3Q86WK7 504 aa17.25■□□□□ 0.35
EDF1-201ENST00000224073 COL23A1Q86Y22 540 aaPredicted RBP17.25■□□□□ 0.35
EDF1-201ENST00000224073 ARXQ96QS3 562 aa17.25■□□□□ 0.35
EDF1-201ENST00000224073 PLEKHO1Q53GL0 409 aaPredicted RBP17.24■□□□□ 0.35
EDF1-201ENST00000224073 C5P01031 1676 aa17.23■□□□□ 0.35
EDF1-201ENST00000224073 PHF14O94880 888 aa17.23■□□□□ 0.35
EDF1-201ENST00000224073 SYT17Q9BSW7 474 aa17.23■□□□□ 0.35
EDF1-201ENST00000224073 LINC00116Q8NCU8 138 aa17.22■□□□□ 0.35
EDF1-201ENST00000224073 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
EDF1-201ENST00000224073 ATG3Q9NT62 314 aa17.22■□□□□ 0.35
EDF1-201ENST00000224073 UTRNP46939 3433 aa17.21■□□□□ 0.35
EDF1-201ENST00000224073 LOC102724428A0A0B4J2F2 783 aa17.21■□□□□ 0.35
EDF1-201ENST00000224073 SIK1P57059 783 aa17.21■□□□□ 0.35
EDF1-201ENST00000224073 ITPK1Q13572 414 aa17.21■□□□□ 0.35
EDF1-201ENST00000224073 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.34
EDF1-201ENST00000224073 ATP6V1AP38606 617 aa17.2■□□□□ 0.34
EDF1-201ENST00000224073 AK7Q96M32 723 aa17.2■□□□□ 0.34
EDF1-201ENST00000224073 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
EDF1-201ENST00000224073 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
EDF1-201ENST00000224073 POLD1P28340 1107 aa17.19■□□□□ 0.34
EDF1-201ENST00000224073 CABP4P57796 275 aa17.19■□□□□ 0.34
EDF1-201ENST00000224073 C1orf141Q5JVX7 400 aa17.19■□□□□ 0.34
EDF1-201ENST00000224073 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
EDF1-201ENST00000224073 C4BP0C0L5 1744 aa17.18■□□□□ 0.34
EDF1-201ENST00000224073 QSER1Q2KHR3 1735 aa17.18■□□□□ 0.34
EDF1-201ENST00000224073 DIAPH1O60610 1272 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms