RNA–Protein interactions for RNA: ENST00000221954.6

CEACAM4-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEACAM4, Length 1,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4-201ENST00000221954 EYA1Q99502 592 aa28.41■■■□□ 2.14
CEACAM4-201ENST00000221954 NHSQ6T4R5 1651 aa28.39■■■□□ 2.14
CEACAM4-201ENST00000221954 NCAPD2Q15021 1401 aa28.39■■■□□ 2.14
CEACAM4-201ENST00000221954 ACSBG1Q96GR2 724 aa28.39■■■□□ 2.14
CEACAM4-201ENST00000221954 ZEB1P37275 1124 aaPredicted RBP28.38■■■□□ 2.13
CEACAM4-201ENST00000221954 SHANK3Q9BYB0 1731 aa28.38■■■□□ 2.13
CEACAM4-201ENST00000221954 PLSCR1O15162 318 aa28.36■■■□□ 2.13
CEACAM4-201ENST00000221954 PTF1AQ7RTS3 328 aa28.36■■■□□ 2.13
CEACAM4-201ENST00000221954 RGPD3A6NKT7 1758 aaPredicted RBP28.36■■■□□ 2.13
CEACAM4-201ENST00000221954 RGPD4Q7Z3J3 1758 aa28.36■■■□□ 2.13
CEACAM4-201ENST00000221954 PCDH11XQ9BZA7 1347 aa28.36■■■□□ 2.13
CEACAM4-201ENST00000221954 PCDH11YQ9BZA8 1340 aa28.36■■■□□ 2.13
CEACAM4-201ENST00000221954 KAT6BQ8WYB5 2073 aa28.36■■■□□ 2.13
CEACAM4-201ENST00000221954 KCNQ2O43526 872 aa28.35■■■□□ 2.13
CEACAM4-201ENST00000221954 MTHFSP49914 203 aa28.34■■■□□ 2.13
CEACAM4-201ENST00000221954 RREB1Q92766 1687 aa28.34■■■□□ 2.13
CEACAM4-201ENST00000221954 SPG7Q9UQ90 795 aa28.33■■■□□ 2.13
CEACAM4-201ENST00000221954 IGSF1Q8N6C5 1336 aa28.33■■■□□ 2.13
CEACAM4-201ENST00000221954 PKD1L3Q7Z443 1732 aa28.32■■■□□ 2.12
CEACAM4-201ENST00000221954 DOT1LQ8TEK3 1739 aa28.3■■■□□ 2.12
CEACAM4-201ENST00000221954 SYTL4Q96C24 671 aaPredicted RBP28.3■■■□□ 2.12
CEACAM4-201ENST00000221954 NUP188Q5SRE5 1749 aa28.29■■■□□ 2.12
CEACAM4-201ENST00000221954 BTAF1O14981 1849 aa28.29■■■□□ 2.12
CEACAM4-201ENST00000221954 NBPF14Q5TI25 921 aa28.28■■■□□ 2.12
CEACAM4-201ENST00000221954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.28■■■□□ 2.12
CEACAM4-201ENST00000221954 PLEKHG2Q9H7P9 1386 aa28.26■■■□□ 2.12
CEACAM4-201ENST00000221954 IL13P35225 146 aa28.26■■■□□ 2.11
CEACAM4-201ENST00000221954 PRIM1P49642 420 aaKnown RBP28.26■■■□□ 2.11
CEACAM4-201ENST00000221954 PSDA5PKW4 1024 aaPredicted RBP28.25■■■□□ 2.11
CEACAM4-201ENST00000221954 CYP27B1O15528 508 aa28.25■■■□□ 2.11
CEACAM4-201ENST00000221954 R3HDM1Q15032 1099 aaKnown RBP28.24■■■□□ 2.11
CEACAM4-201ENST00000221954 DIAPH1O60610 1272 aaKnown RBP28.23■■■□□ 2.11
CEACAM4-201ENST00000221954 TXNRD1Q16881 649 aa28.22■■■□□ 2.11
CEACAM4-201ENST00000221954 SULT6B1Q6IMI4 303 aa28.22■■■□□ 2.11
CEACAM4-201ENST00000221954 PLEKHO1Q53GL0 409 aaPredicted RBP28.21■■■□□ 2.11
CEACAM4-201ENST00000221954 AEBP1Q8IUX7 1158 aa28.2■■■□□ 2.1
CEACAM4-201ENST00000221954 IFNL2Q8IZJ0 200 aa28.2■■■□□ 2.1
CEACAM4-201ENST00000221954 CFAP53Q96M91 514 aa28.2■■■□□ 2.1
CEACAM4-201ENST00000221954 PROM2Q8N271 834 aa28.19■■■□□ 2.1
CEACAM4-201ENST00000221954 AMOTQ4VCS5 1084 aa28.18■■■□□ 2.1
CEACAM4-201ENST00000221954 KDRP35968 1356 aa28.18■■■□□ 2.1
CEACAM4-201ENST00000221954 PHKG2P15735 406 aa28.17■■■□□ 2.1
CEACAM4-201ENST00000221954 NKX1-1Q15270 411 aaPredicted RBP28.17■■■□□ 2.1
CEACAM4-201ENST00000221954 PPP2R1AP30153 589 aa28.15■■■□□ 2.1
CEACAM4-201ENST00000221954 DDX10Q13206 875 aaKnown RBP28.14■■■□□ 2.1
CEACAM4-201ENST00000221954 ZNF530Q6P9A1 599 aaPredicted RBP28.14■■■□□ 2.1
CEACAM4-201ENST00000221954 MPRIPQ6WCQ1 1025 aa28.14■■■□□ 2.1
CEACAM4-201ENST00000221954 TOGARAM1Q9Y4F4 1720 aa28.14■■■□□ 2.1
CEACAM4-201ENST00000221954 COL3A1P02461 1466 aaPredicted RBP28.14■■■□□ 2.09
CEACAM4-201ENST00000221954 U2SURPO15042 1029 aaKnown RBP28.13■■■□□ 2.09
CEACAM4-201ENST00000221954 HSP90AB1P08238 724 aaKnown RBP28.13■■■□□ 2.09
CEACAM4-201ENST00000221954 HMOX1P09601 288 aa28.13■■■□□ 2.09
CEACAM4-201ENST00000221954 C1orf141Q5JVX7 400 aa28.12■■■□□ 2.09
CEACAM4-201ENST00000221954 SLC27A3Q5K4L6 730 aa28.12■■■□□ 2.09
CEACAM4-201ENST00000221954 STK32BQ9NY57 414 aa28.12■■■□□ 2.09
CEACAM4-201ENST00000221954 ITGB4P16144 1822 aa28.12■■■□□ 2.09
CEACAM4-201ENST00000221954 ANO8Q9HCE9 1232 aaPredicted RBP28.1■■■□□ 2.09
CEACAM4-201ENST00000221954 TMOD3Q9NYL9 352 aa28.09■■■□□ 2.09
CEACAM4-201ENST00000221954 DCAF5Q96JK2 942 aa28.08■■■□□ 2.09
CEACAM4-201ENST00000221954 NUDCQ9Y266 331 aa28.08■■■□□ 2.09
CEACAM4-201ENST00000221954 LY75O60449 1722 aa28.08■■■□□ 2.09
CEACAM4-201ENST00000221954 SMARCC1Q92922 1105 aaPredicted RBP28.06■■■□□ 2.08
CEACAM4-201ENST00000221954 SLC15A2Q16348 729 aa28.05■■■□□ 2.08
CEACAM4-201ENST00000221954 PIGBQ92521 554 aa28.05■■■□□ 2.08
CEACAM4-201ENST00000221954 LRRC4BQ9NT99 713 aa28.05■■■□□ 2.08
CEACAM4-201ENST00000221954 CCNL1Q9UK58 526 aaPredicted RBP28.05■■■□□ 2.08
CEACAM4-201ENST00000221954 PALLDQ8WX93 1383 aa28.04■■■□□ 2.08
CEACAM4-201ENST00000221954 PAPPAQ13219 1627 aa28.03■■■□□ 2.08
CEACAM4-201ENST00000221954 ERVV-2B6SEH9 535 aa28.03■■■□□ 2.08
CEACAM4-201ENST00000221954 LRP5O75197 1615 aa28.03■■■□□ 2.08
CEACAM4-201ENST00000221954 HMGB2P26583 209 aaKnown RBP28.02■■■□□ 2.08
CEACAM4-201ENST00000221954 RALBP1Q15311 655 aa28.01■■■□□ 2.07
CEACAM4-201ENST00000221954 AKAP4Q5JQC9 854 aa28.01■■■□□ 2.07
CEACAM4-201ENST00000221954 KCNQ4P56696 695 aa28■■■□□ 2.07
CEACAM4-201ENST00000221954 CABP4P57796 275 aa27.99■■■□□ 2.07
CEACAM4-201ENST00000221954 KDM6AO15550 1401 aaPredicted RBP27.99■■■□□ 2.07
CEACAM4-201ENST00000221954 U2AF1L5P0DN76 240 aaPredicted RBP27.98■■■□□ 2.07
CEACAM4-201ENST00000221954 U2AF1Q01081 240 aaKnown RBP eCLIP27.98■■■□□ 2.07
CEACAM4-201ENST00000221954 MTHFSDQ2M296 383 aaKnown RBP27.96■■■□□ 2.07
CEACAM4-201ENST00000221954 ASAP1Q9ULH1 1129 aa27.96■■■□□ 2.07
CEACAM4-201ENST00000221954 ZNF827Q17R98 1081 aa27.95■■■□□ 2.06
CEACAM4-201ENST00000221954 CASZ1Q86V15 1759 aa27.95■■■□□ 2.06
CEACAM4-201ENST00000221954 SCN11AQ9UI33 1791 aa27.94■■■□□ 2.06
CEACAM4-201ENST00000221954 GAS2L2Q8NHY3 880 aa27.94■■■□□ 2.06
CEACAM4-201ENST00000221954 AKT1S1Q96B36 256 aa27.94■■■□□ 2.06
CEACAM4-201ENST00000221954 SPON1Q9HCB6 807 aa27.94■■■□□ 2.06
CEACAM4-201ENST00000221954 TFCP2L1Q9NZI6 479 aa27.94■■■□□ 2.06
CEACAM4-201ENST00000221954 C5P01031 1676 aa27.94■■■□□ 2.06
CEACAM4-201ENST00000221954 PRKAR2BP31323 418 aa27.93■■■□□ 2.06
CEACAM4-201ENST00000221954 ATG3Q9NT62 314 aa27.93■■■□□ 2.06
CEACAM4-201ENST00000221954 RSPH6AQ9H0K4 717 aa27.92■■■□□ 2.06
CEACAM4-201ENST00000221954 SRCAPQ6ZRS2 3230 aa27.91■■■□□ 2.06
CEACAM4-201ENST00000221954 LOC102724428A0A0B4J2F2 783 aa27.91■■■□□ 2.06
CEACAM4-201ENST00000221954 FCHSD2O94868 740 aa27.91■■■□□ 2.06
CEACAM4-201ENST00000221954 SIK1P57059 783 aa27.91■■■□□ 2.06
CEACAM4-201ENST00000221954 NFATC2IPQ8NCF5 419 aa27.91■■■□□ 2.06
CEACAM4-201ENST00000221954 PDGFDQ9GZP0 370 aaPredicted RBP27.9■■■□□ 2.06
CEACAM4-201ENST00000221954 TAF1LQ8IZX4 1826 aa27.9■■■□□ 2.06
CEACAM4-201ENST00000221954 MYBBP1AQ9BQG0 1328 aaKnown RBP27.9■■■□□ 2.06
CEACAM4-201ENST00000221954 QSER1Q2KHR3 1735 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms